RNA–Protein interactions for RNA: ENST00000505065.1

CDC42SE2-208, Transcript of CDC42 small effector 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42SE2, Length 4,352 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2-208ENST00000505065 IRF8Q02556 426 aa7.85□□□□□ -1.15
CDC42SE2-208ENST00000505065 SPIN4Q56A73 249 aa7.85□□□□□ -1.15
CDC42SE2-208ENST00000505065 QSOX2Q6ZRP7 698 aa7.85□□□□□ -1.15
CDC42SE2-208ENST00000505065 IKBIPQ70UQ0 350 aa7.85□□□□□ -1.15
CDC42SE2-208ENST00000505065 MILR1Q7Z6M3 343 aa7.85□□□□□ -1.15
CDC42SE2-208ENST00000505065 TAX1BP1Q86VP1 789 aa7.85□□□□□ -1.15
CDC42SE2-208ENST00000505065 C2orf73Q8N5S3 287 aaPredicted RBP7.85□□□□□ -1.15
CDC42SE2-208ENST00000505065 CPSF7Q8N684 471 aaKnown RBP7.85□□□□□ -1.15
CDC42SE2-208ENST00000505065 SCNM1Q9BWG6 230 aa7.85□□□□□ -1.15
CDC42SE2-208ENST00000505065 GPR87Q9BY21 358 aa7.85□□□□□ -1.15
CDC42SE2-208ENST00000505065 TRIM4Q9C037 500 aa7.85□□□□□ -1.15
CDC42SE2-208ENST00000505065 ROGDIQ9GZN7 287 aa7.85□□□□□ -1.15
CDC42SE2-208ENST00000505065 ZNF395Q9H8N7 513 aaPredicted RBP7.85□□□□□ -1.15
CDC42SE2-208ENST00000505065 FANCEQ9HB96 536 aa7.85□□□□□ -1.15
CDC42SE2-208ENST00000505065 ZNF639Q9UID6 485 aa7.85□□□□□ -1.15
CDC42SE2-208ENST00000505065 RARRES3Q9UL19 164 aa7.85□□□□□ -1.15
CDC42SE2-208ENST00000505065 SLC28A1O00337 649 aa7.84□□□□□ -1.15
CDC42SE2-208ENST00000505065 CD63P08962 238 aa7.84□□□□□ -1.15
CDC42SE2-208ENST00000505065 MPSTP25325 297 aa7.84□□□□□ -1.15
CDC42SE2-208ENST00000505065 SLC5A2P31639 672 aa7.84□□□□□ -1.15
CDC42SE2-208ENST00000505065 GABREP78334 506 aa7.84□□□□□ -1.15
CDC42SE2-208ENST00000505065 SNX31Q8N9S9 440 aa7.84□□□□□ -1.15
CDC42SE2-208ENST00000505065 KCNC2Q96PR1 638 aa7.84□□□□□ -1.15
CDC42SE2-208ENST00000505065 RUFY1Q96T51 708 aa7.84□□□□□ -1.15
CDC42SE2-208ENST00000505065 MYNNQ9NPC7 610 aa7.84□□□□□ -1.15
CDC42SE2-208ENST00000505065 SLC39A1Q9NY26 324 aa7.84□□□□□ -1.15
CDC42SE2-208ENST00000505065 KIAA1549Q9HCM3 1950 aa7.84□□□□□ -1.15
CDC42SE2-208ENST00000505065 PROM1O43490 865 aa7.84□□□□□ -1.15
CDC42SE2-208ENST00000505065 SUPT7LO94864 414 aa7.84□□□□□ -1.15
CDC42SE2-208ENST00000505065 ITIH1P19827 911 aa7.84□□□□□ -1.15
CDC42SE2-208ENST00000505065 CSTF2P33240 577 aaKnown RBP eCLIP7.84□□□□□ -1.15
CDC42SE2-208ENST00000505065 ATP1A2P50993 1020 aa7.84□□□□□ -1.15
CDC42SE2-208ENST00000505065 CDH13P55290 713 aa7.84□□□□□ -1.15
CDC42SE2-208ENST00000505065 FOXK2Q01167 660 aa7.84□□□□□ -1.15
CDC42SE2-208ENST00000505065 STX3Q13277 289 aa7.84□□□□□ -1.15
CDC42SE2-208ENST00000505065 RUNX2Q13950 521 aa7.84□□□□□ -1.15
CDC42SE2-208ENST00000505065 TERF2Q15554 542 aa7.84□□□□□ -1.15
CDC42SE2-208ENST00000505065 TCHHL1Q5QJ38 904 aaPredicted RBP7.84□□□□□ -1.15
CDC42SE2-208ENST00000505065 ATG16L1Q676U5 607 aa7.84□□□□□ -1.15
CDC42SE2-208ENST00000505065 OR4C11Q6IEV9 310 aa7.84□□□□□ -1.15
CDC42SE2-208ENST00000505065 TWIST2Q8WVJ9 160 aa7.84□□□□□ -1.15
CDC42SE2-208ENST00000505065 CCDC28BQ9BUN5 200 aa7.84□□□□□ -1.15
CDC42SE2-208ENST00000505065 SERTAD3Q9UJW9 196 aa7.84□□□□□ -1.15
CDC42SE2-208ENST00000505065 TGFBR3LH3BV60 316 aa7.84□□□□□ -1.15
CDC42SE2-208ENST00000505065 EFSO43281 561 aa7.84□□□□□ -1.15
CDC42SE2-208ENST00000505065 DNAJB6O75190 326 aa7.84□□□□□ -1.15
CDC42SE2-208ENST00000505065 VPS4BO75351 444 aa7.84□□□□□ -1.15
CDC42SE2-208ENST00000505065 LYPLA1O75608 230 aaPredicted RBP7.84□□□□□ -1.15
CDC42SE2-208ENST00000505065 HIST1H1TP22492 207 aaPredicted RBP7.84□□□□□ -1.15
CDC42SE2-208ENST00000505065 STXBP1P61764 594 aaKnown RBP7.84□□□□□ -1.15
CDC42SE2-208ENST00000505065 MEF2AQ02078 507 aaPredicted RBP7.84□□□□□ -1.15
CDC42SE2-208ENST00000505065 FAM71E1Q6IPT2 247 aa7.84□□□□□ -1.15
CDC42SE2-208ENST00000505065 ZCCHC23Q6ZST2 131 aa7.84□□□□□ -1.15
CDC42SE2-208ENST00000505065 ABHD13Q7L211 337 aa7.84□□□□□ -1.15
CDC42SE2-208ENST00000505065 PRSS41Q7RTY9 318 aa7.84□□□□□ -1.15
CDC42SE2-208ENST00000505065 ARFGAP2Q8N6H7 521 aa7.84□□□□□ -1.15
CDC42SE2-208ENST00000505065 KCT2Q8NC54 265 aa7.84□□□□□ -1.15
CDC42SE2-208ENST00000505065 MID1IP1Q9NPA3 183 aa7.84□□□□□ -1.15
CDC42SE2-208ENST00000505065 EHD3Q9NZN3 535 aa7.84□□□□□ -1.15
CDC42SE2-208ENST00000505065 DAPP1Q9UN19 280 aa7.84□□□□□ -1.15
CDC42SE2-208ENST00000505065 MED19A0JLT2 244 aaPredicted RBP7.83□□□□□ -1.16
CDC42SE2-208ENST00000505065 SOCS6O14544 535 aa7.83□□□□□ -1.16
CDC42SE2-208ENST00000505065 CEACAM4O75871 244 aa7.83□□□□□ -1.16
CDC42SE2-208ENST00000505065 ZNF888P0CJ79 500 aaPredicted RBP7.83□□□□□ -1.16
CDC42SE2-208ENST00000505065 EIF2S3P41091 472 aaKnown RBP7.83□□□□□ -1.16
CDC42SE2-208ENST00000505065 LIM2P55344 173 aa7.83□□□□□ -1.16
CDC42SE2-208ENST00000505065 RAB38P57729 211 aa7.83□□□□□ -1.16
CDC42SE2-208ENST00000505065 RPS13P62277 151 aaKnown RBP7.83□□□□□ -1.16
CDC42SE2-208ENST00000505065 BIKQ13323 160 aa7.83□□□□□ -1.16
CDC42SE2-208ENST00000505065 PRSS53Q2L4Q9 553 aa7.83□□□□□ -1.16
CDC42SE2-208ENST00000505065 H3F3CQ6NXT2 135 aa7.83□□□□□ -1.16
CDC42SE2-208ENST00000505065 SHISA5Q8N114 240 aa7.83□□□□□ -1.16
CDC42SE2-208ENST00000505065 ZNF655Q8N720 491 aaPredicted RBP7.83□□□□□ -1.16
CDC42SE2-208ENST00000505065 ZNF681Q96N22 645 aa7.83□□□□□ -1.16
CDC42SE2-208ENST00000505065 C14orf105Q9NVL8 296 aa7.83□□□□□ -1.16
CDC42SE2-208ENST00000505065 LYARQ9NX58 379 aaKnown RBP7.83□□□□□ -1.16
CDC42SE2-208ENST00000505065 ATP6V1HQ9UI12 483 aa7.83□□□□□ -1.16
CDC42SE2-208ENST00000505065 OR1F1O43749 312 aa7.83□□□□□ -1.16
CDC42SE2-208ENST00000505065 SCRG1O75711 98 aa7.83□□□□□ -1.16
CDC42SE2-208ENST00000505065 STK17BO94768 372 aa7.83□□□□□ -1.16
CDC42SE2-208ENST00000505065 GPR143P51810 404 aa7.83□□□□□ -1.16
CDC42SE2-208ENST00000505065 EMX2Q04743 252 aa7.83□□□□□ -1.16
CDC42SE2-208ENST00000505065 PIGWQ7Z7B1 504 aa7.83□□□□□ -1.16
CDC42SE2-208ENST00000505065 ESX1Q8N693 406 aa7.83□□□□□ -1.16
CDC42SE2-208ENST00000505065 TTC29Q8NA56 475 aaPredicted RBP7.83□□□□□ -1.16
CDC42SE2-208ENST00000505065 PIWIL2Q8TC59 973 aaKnown RBP7.83□□□□□ -1.16
CDC42SE2-208ENST00000505065 SLC13A3Q8WWT9 602 aa7.83□□□□□ -1.16
CDC42SE2-208ENST00000505065 NLNQ9BYT8 704 aa7.83□□□□□ -1.16
CDC42SE2-208ENST00000505065 MKKSQ9NPJ1 570 aaPredicted RBP7.83□□□□□ -1.16
CDC42SE2-208ENST00000505065 MAP4K5Q9Y4K4 846 aa7.83□□□□□ -1.16
CDC42SE2-208ENST00000505065 FAM186AA6NE01 2351 aa7.83□□□□□ -1.16
CDC42SE2-208ENST00000505065 TMEM233B4DJY2 109 aa7.83□□□□□ -1.16
CDC42SE2-208ENST00000505065 TMPRSS11DO60235 418 aa7.83□□□□□ -1.16
CDC42SE2-208ENST00000505065 OR2B3O76000 313 aa7.83□□□□□ -1.16
CDC42SE2-208ENST00000505065 ALOX12P18054 663 aa7.83□□□□□ -1.16
CDC42SE2-208ENST00000505065 GRK3P35626 688 aa7.83□□□□□ -1.16
CDC42SE2-208ENST00000505065 UGT8Q16880 541 aa7.83□□□□□ -1.16
CDC42SE2-208ENST00000505065 FAM214AQ32MH5 1076 aa7.83□□□□□ -1.16
CDC42SE2-208ENST00000505065 TUBB8Q3ZCM7 444 aa7.83□□□□□ -1.16
CDC42SE2-208ENST00000505065 PHF19Q5T6S3 580 aa7.83□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms