RNA–Protein interactions for RNA: ENST00000503945.2

MED28-203, Transcript of mediator complex subunit 28, humanhuman

TSL 1 (best)

Gene MED28, Length 879 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MED28-203ENST00000503945 SPRP35270 261 aaPredicted RBP11.24□□□□□ -0.61
MED28-203ENST00000503945 CD96P40200 585 aa11.24□□□□□ -0.61
MED28-203ENST00000503945 ATP6V0D1P61421 351 aa11.24□□□□□ -0.61
MED28-203ENST00000503945 ETF1P62495 437 aaKnown RBP11.24□□□□□ -0.61
MED28-203ENST00000503945 OLR1P78380 273 aa11.24□□□□□ -0.61
MED28-203ENST00000503945 BTN3A2P78410 334 aa11.24□□□□□ -0.61
MED28-203ENST00000503945 TGFBIQ15582 683 aa11.24□□□□□ -0.61
MED28-203ENST00000503945 CDKL4Q5MAI5 379 aa11.24□□□□□ -0.61
MED28-203ENST00000503945 GRTP1Q5TC63 336 aa11.24□□□□□ -0.61
MED28-203ENST00000503945 SULT1C3Q6IMI6 304 aa11.24□□□□□ -0.61
MED28-203ENST00000503945 PAPD4Q6PIY7 484 aaKnown RBP11.24□□□□□ -0.61
MED28-203ENST00000503945 TMIGD1Q6UXZ0 262 aa11.24□□□□□ -0.61
MED28-203ENST00000503945 SLCO4C1Q6ZQN7 724 aa11.24□□□□□ -0.61
MED28-203ENST00000503945 TMPRSS11BQ86T26 416 aa11.24□□□□□ -0.61
MED28-203ENST00000503945 CTAGE3PQ8IX95 158 aa11.24□□□□□ -0.61
MED28-203ENST00000503945 SLC34A3Q8N130 599 aa11.24□□□□□ -0.61
MED28-203ENST00000503945 SPATA6LQ8N4H0 392 aa11.24□□□□□ -0.61
MED28-203ENST00000503945 SLC5A8Q8N695 610 aa11.24□□□□□ -0.61
MED28-203ENST00000503945 HORMAD2Q8N7B1 307 aa11.24□□□□□ -0.61
MED28-203ENST00000503945 AMER2Q8N7J2 671 aa11.24□□□□□ -0.61
MED28-203ENST00000503945 ANKRD53Q8N9V6 530 aa11.24□□□□□ -0.61
MED28-203ENST00000503945 SMIM10Q96HG1 83 aa11.24□□□□□ -0.61
MED28-203ENST00000503945 SEC16BQ96JE7 1060 aa11.24□□□□□ -0.61
MED28-203ENST00000503945 TAAR6Q96RI8 345 aa11.24□□□□□ -0.61
MED28-203ENST00000503945 SLX1AQ9BQ83 275 aa11.24□□□□□ -0.61
MED28-203ENST00000503945 MCMBPQ9BTE3 642 aa11.24□□□□□ -0.61
MED28-203ENST00000503945 SLC6A16Q9GZN6 736 aa11.24□□□□□ -0.61
MED28-203ENST00000503945 PITHD1Q9GZP4 211 aaPredicted RBP11.24□□□□□ -0.61
MED28-203ENST00000503945 RAB17Q9H0T7 212 aa11.24□□□□□ -0.61
MED28-203ENST00000503945 SPNS1Q9H2V7 528 aa11.24□□□□□ -0.61
MED28-203ENST00000503945 RHBGQ9H310 441 aa11.24□□□□□ -0.61
MED28-203ENST00000503945 KLHL31Q9H511 634 aa11.24□□□□□ -0.61
MED28-203ENST00000503945 SMYD2Q9NRG4 433 aa11.24□□□□□ -0.61
MED28-203ENST00000503945 A0A088AWK7 358 aa11.23□□□□□ -0.61
MED28-203ENST00000503945 TCRBV9S1A1TA0A576 114 aa11.23□□□□□ -0.61
MED28-203ENST00000503945 LRIT2A6NDA9 550 aa11.23□□□□□ -0.61
MED28-203ENST00000503945 ANKDD1BA6NHY2 528 aa11.23□□□□□ -0.61
MED28-203ENST00000503945 CXorf49A8MYA2 514 aaPredicted RBP11.23□□□□□ -0.61
MED28-203ENST00000503945 FAM227AF5H4B4 570 aa11.23□□□□□ -0.61
MED28-203ENST00000503945 CLDN4O14493 209 aa11.23□□□□□ -0.61
MED28-203ENST00000503945 CDK2AP1O14519 115 aa11.23□□□□□ -0.61
MED28-203ENST00000503945 B3GALT4O96024 378 aa11.23□□□□□ -0.61
MED28-203ENST00000503945 S100BP04271 92 aaPredicted RBP11.23□□□□□ -0.61
MED28-203ENST00000503945 RNH1P13489 461 aaKnown RBP11.23□□□□□ -0.61
MED28-203ENST00000503945 CD46P15529 392 aa11.23□□□□□ -0.61
MED28-203ENST00000503945 POU3F2P20265 443 aaPredicted RBP11.23□□□□□ -0.61
MED28-203ENST00000503945 ZNF10P21506 573 aaPredicted RBP11.23□□□□□ -0.61
MED28-203ENST00000503945 GSTM2P28161 218 aa11.23□□□□□ -0.61
MED28-203ENST00000503945 GGT5P36269 586 aa11.23□□□□□ -0.61
MED28-203ENST00000503945 GP5P40197 560 aa11.23□□□□□ -0.61
MED28-203ENST00000503945 MAGEA4P43358 317 aa11.23□□□□□ -0.61
MED28-203ENST00000503945 BTG2P78543 158 aa11.23□□□□□ -0.61
MED28-203ENST00000503945 REEP5Q00765 189 aa11.23□□□□□ -0.61
MED28-203ENST00000503945 HIST2H2ACQ16777 129 aaPredicted RBP11.23□□□□□ -0.61
MED28-203ENST00000503945 C18orf21Q32NC0 220 aaPredicted RBP11.23□□□□□ -0.61
MED28-203ENST00000503945 ZNF766Q5HY98 468 aa11.23□□□□□ -0.61
MED28-203ENST00000503945 TOR1AIP1Q5JTV8 583 aa11.23□□□□□ -0.61
MED28-203ENST00000503945 ZNF324BQ6AW86 544 aaPredicted RBP11.23□□□□□ -0.61
MED28-203ENST00000503945 FCRLBQ6BAA4 426 aa11.23□□□□□ -0.61
MED28-203ENST00000503945 HIST2H2AA3Q6FI13 130 aa11.23□□□□□ -0.61
MED28-203ENST00000503945 GFRALQ6UXV0 394 aa11.23□□□□□ -0.61
MED28-203ENST00000503945 RPS19BP1Q86WX3 136 aaKnown RBP11.23□□□□□ -0.61
MED28-203ENST00000503945 BEST3Q8N1M1 668 aa11.23□□□□□ -0.61
MED28-203ENST00000503945 CREB3L4Q8TEY5 395 aa11.23□□□□□ -0.61
MED28-203ENST00000503945 CCT6BQ92526 530 aa11.23□□□□□ -0.61
MED28-203ENST00000503945 NR4A3Q92570 626 aa11.23□□□□□ -0.61
MED28-203ENST00000503945 RBCK1Q9BYM8 510 aa11.23□□□□□ -0.61
MED28-203ENST00000503945 UNKQ9C0B0 810 aaKnown RBP11.23□□□□□ -0.61
MED28-203ENST00000503945 CDCP1Q9H5V8 836 aa11.23□□□□□ -0.61
MED28-203ENST00000503945 NT5DC2Q9H857 520 aa11.23□□□□□ -0.61
MED28-203ENST00000503945 CAB39LQ9H9S4 337 aa11.23□□□□□ -0.61
MED28-203ENST00000503945 PRDM9Q9NQV7 894 aa11.23□□□□□ -0.61
MED28-203ENST00000503945 GPRC5BQ9NZH0 403 aa11.23□□□□□ -0.61
MED28-203ENST00000503945 CD274Q9NZQ7 290 aa11.23□□□□□ -0.61
MED28-203ENST00000503945 ARHGAP10A1A4S6 786 aa11.22□□□□□ -0.61
MED28-203ENST00000503945 FAM159BA6NKW6 160 aa11.22□□□□□ -0.61
MED28-203ENST00000503945 E2F3O00716 465 aa11.22□□□□□ -0.61
MED28-203ENST00000503945 FANCGO15287 622 aa11.22□□□□□ -0.61
MED28-203ENST00000503945 PHGDHO43175 533 aaKnown RBP11.22□□□□□ -0.61
MED28-203ENST00000503945 STK16O75716 305 aa11.22□□□□□ -0.61
MED28-203ENST00000503945 MLYCDO95822 493 aa11.22□□□□□ -0.61
MED28-203ENST00000503945 STSP08842 583 aa11.22□□□□□ -0.61
MED28-203ENST00000503945 CD1DP15813 335 aa11.22□□□□□ -0.61
MED28-203ENST00000503945 SLC6A12P48065 614 aa11.22□□□□□ -0.61
MED28-203ENST00000503945 SLC26A5P58743 744 aa11.22□□□□□ -0.61
MED28-203ENST00000503945 RAB10P61026 200 aa11.22□□□□□ -0.61
MED28-203ENST00000503945 OC90Q02509 493 aaPredicted RBP11.22□□□□□ -0.61
MED28-203ENST00000503945 RBPJQ06330 500 aa11.22□□□□□ -0.61
MED28-203ENST00000503945 C2orf54Q08AI8 447 aa11.22□□□□□ -0.61
MED28-203ENST00000503945 HYAL2Q12891 473 aa11.22□□□□□ -0.61
MED28-203ENST00000503945 LAPTM5Q13571 262 aa11.22□□□□□ -0.61
MED28-203ENST00000503945 TUBA3CQ13748 450 aa11.22□□□□□ -0.61
MED28-203ENST00000503945 ZRSR2Q15696 482 aaKnown RBP11.22□□□□□ -0.61
MED28-203ENST00000503945 ZNF800Q2TB10 664 aaPredicted RBP eCLIP11.22□□□□□ -0.61
MED28-203ENST00000503945 SPINK14Q6IE38 97 aa11.22□□□□□ -0.61
MED28-203ENST00000503945 TUBA3EQ6PEY2 450 aa11.22□□□□□ -0.61
MED28-203ENST00000503945 SYT10Q6XYQ8 523 aa11.22□□□□□ -0.61
MED28-203ENST00000503945 QSOX2Q6ZRP7 698 aa11.22□□□□□ -0.61
MED28-203ENST00000503945 RAPH1Q70E73 1250 aa11.22□□□□□ -0.61
MED28-203ENST00000503945 ABCA12Q86UK0 2595 aa11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms