RNA–Protein interactions for RNA: ENST00000503468.5

NEDD4-204, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best)

Gene NEDD4, Length 6,339 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-204ENST00000503468 PTBP3O95758 552 aaKnown RBP2.68□□□□□ -1.98
NEDD4-204ENST00000503468 IGLV3-1P01715 115 aa2.68□□□□□ -1.98
NEDD4-204ENST00000503468 ZNF30P17039 623 aa2.68□□□□□ -1.98
NEDD4-204ENST00000503468 SDC2P34741 201 aa2.68□□□□□ -1.98
NEDD4-204ENST00000503468 BMPR1AP36894 532 aa2.68□□□□□ -1.98
NEDD4-204ENST00000503468 CLCN5P51795 746 aa2.68□□□□□ -1.98
NEDD4-204ENST00000503468 GPR143P51810 404 aa2.68□□□□□ -1.98
NEDD4-204ENST00000503468 EIF5AP63241 154 aaKnown RBP2.68□□□□□ -1.98
NEDD4-204ENST00000503468 POU4F1Q01851 419 aa2.68□□□□□ -1.98
NEDD4-204ENST00000503468 PAX2Q02962 417 aa2.68□□□□□ -1.98
NEDD4-204ENST00000503468 DNASE1L3Q13609 305 aa2.68□□□□□ -1.98
NEDD4-204ENST00000503468 CUL2Q13617 745 aa2.68□□□□□ -1.98
NEDD4-204ENST00000503468 FASTKD3Q14CZ7 662 aaKnown RBP2.68□□□□□ -1.98
NEDD4-204ENST00000503468 SWI5Q1ZZU3 235 aa2.68□□□□□ -1.98
NEDD4-204ENST00000503468 SHEQ5VZ18 495 aa2.68□□□□□ -1.98
NEDD4-204ENST00000503468 CD276Q5ZPR3 534 aa2.68□□□□□ -1.98
NEDD4-204ENST00000503468 B3GNTL1Q67FW5 361 aaPredicted RBP2.68□□□□□ -1.98
NEDD4-204ENST00000503468 GLYATQ6IB77 296 aa2.68□□□□□ -1.98
NEDD4-204ENST00000503468 RETSATQ6NUM9 610 aa2.68□□□□□ -1.98
NEDD4-204ENST00000503468 MZT2AQ6P582 158 aa2.68□□□□□ -1.98
NEDD4-204ENST00000503468 SLC46A3Q7Z3Q1 461 aa2.68□□□□□ -1.98
NEDD4-204ENST00000503468 MIB1Q86YT6 1006 aa2.68□□□□□ -1.98
NEDD4-204ENST00000503468 SYTL1Q8IYJ3 562 aa2.68□□□□□ -1.98
NEDD4-204ENST00000503468 TAGAPQ8N103 731 aa2.68□□□□□ -1.98
NEDD4-204ENST00000503468 SRFBP1Q8NEF9 429 aaKnown RBP2.68□□□□□ -1.98
NEDD4-204ENST00000503468 DUSP18Q8NEJ0 188 aa2.68□□□□□ -1.98
NEDD4-204ENST00000503468 OR8J3Q8NGG0 315 aa2.68□□□□□ -1.98
NEDD4-204ENST00000503468 FAM110BQ8TC76 370 aa2.68□□□□□ -1.98
NEDD4-204ENST00000503468 BPIFB1Q8TDL5 484 aa2.68□□□□□ -1.98
NEDD4-204ENST00000503468 ZNF669Q96BR6 464 aaPredicted RBP2.68□□□□□ -1.98
NEDD4-204ENST00000503468 PRR11Q96HE9 360 aaPredicted RBP2.68□□□□□ -1.98
NEDD4-204ENST00000503468 ZNF512Q96ME7 567 aaPredicted RBP2.68□□□□□ -1.98
NEDD4-204ENST00000503468 FOPNLQ96NB1 174 aa2.68□□□□□ -1.98
NEDD4-204ENST00000503468 DCLRE1CQ96SD1 692 aaKnown RBP2.68□□□□□ -1.98
NEDD4-204ENST00000503468 ZNF577Q9BSK1 485 aa2.68□□□□□ -1.98
NEDD4-204ENST00000503468 TARS2Q9BW92 718 aaKnown RBP2.68□□□□□ -1.98
NEDD4-204ENST00000503468 B3GNT5Q9BYG0 378 aa2.68□□□□□ -1.98
NEDD4-204ENST00000503468 TGIF2Q9GZN2 237 aa2.68□□□□□ -1.98
NEDD4-204ENST00000503468 TMEM39BQ9GZU3 492 aa2.68□□□□□ -1.98
NEDD4-204ENST00000503468 LHPPQ9H008 270 aa2.68□□□□□ -1.98
NEDD4-204ENST00000503468 TASP1Q9H6P5 420 aa2.68□□□□□ -1.98
NEDD4-204ENST00000503468 ACSS2Q9NR19 701 aa2.68□□□□□ -1.98
NEDD4-204ENST00000503468 SNX15Q9NRS6 342 aa2.68□□□□□ -1.98
NEDD4-204ENST00000503468 RNF146Q9NTX7 359 aa2.68□□□□□ -1.98
NEDD4-204ENST00000503468 TMEM216Q9P0N5 145 aa2.68□□□□□ -1.98
NEDD4-204ENST00000503468 SLC27A5Q9Y2P5 690 aa2.68□□□□□ -1.98
NEDD4-204ENST00000503468 ASB1Q9Y576 335 aa2.68□□□□□ -1.98
NEDD4-204ENST00000503468 FPGTO14772 594 aa2.68□□□□□ -1.98
NEDD4-204ENST00000503468 HNRNPDLO14979 420 aaKnown RBP2.68□□□□□ -1.98
NEDD4-204ENST00000503468 ARPC2O15144 300 aa2.68□□□□□ -1.98
NEDD4-204ENST00000503468 HYAL3O43820 417 aaPredicted RBP2.68□□□□□ -1.98
NEDD4-204ENST00000503468 SLC28A2O43868 658 aa2.68□□□□□ -1.98
NEDD4-204ENST00000503468 ATG13O75143 517 aa2.68□□□□□ -1.98
NEDD4-204ENST00000503468 NPIPB7O75200 414 aa2.68□□□□□ -1.98
NEDD4-204ENST00000503468 ZNF780AO75290 641 aaPredicted RBP2.68□□□□□ -1.98
NEDD4-204ENST00000503468 KRT33AO76009 404 aa2.68□□□□□ -1.98
NEDD4-204ENST00000503468 IPO13O94829 963 aaKnown RBP2.68□□□□□ -1.98
NEDD4-204ENST00000503468 CD19P15391 556 aa2.68□□□□□ -1.98
NEDD4-204ENST00000503468 TNNI3P19429 210 aa2.68□□□□□ -1.98
NEDD4-204ENST00000503468 ERFP50548 548 aa2.68□□□□□ -1.98
NEDD4-204ENST00000503468 RAB5BP61020 215 aa2.68□□□□□ -1.98
NEDD4-204ENST00000503468 PSPHP78330 225 aa2.68□□□□□ -1.98
NEDD4-204ENST00000503468 CREMQ03060 361 aa2.68□□□□□ -1.98
NEDD4-204ENST00000503468 ABHD18Q0P651 414 aa2.68□□□□□ -1.98
NEDD4-204ENST00000503468 PLD1Q13393 1074 aa2.68□□□□□ -1.98
NEDD4-204ENST00000503468 NFYCQ13952 458 aa2.68□□□□□ -1.98
NEDD4-204ENST00000503468 FAM214AQ32MH5 1076 aa2.68□□□□□ -1.98
NEDD4-204ENST00000503468 OTUD3Q5T2D3 398 aaPredicted RBP2.68□□□□□ -1.98
NEDD4-204ENST00000503468 EEF1DP3Q658K8 133 aa2.68□□□□□ -1.98
NEDD4-204ENST00000503468 ANKS6Q68DC2 871 aa2.68□□□□□ -1.98
NEDD4-204ENST00000503468 LAIR2Q6ISS4 152 aa2.68□□□□□ -1.98
NEDD4-204ENST00000503468 ZNF425Q6IV72 752 aa2.68□□□□□ -1.98
NEDD4-204ENST00000503468 KIAA1161Q6NSJ0 714 aa2.68□□□□□ -1.98
NEDD4-204ENST00000503468 USP45Q70EL2 814 aa2.68□□□□□ -1.98
NEDD4-204ENST00000503468 ZNF367Q7RTV3 350 aa2.68□□□□□ -1.98
NEDD4-204ENST00000503468 GPR142Q7Z601 462 aa2.68□□□□□ -1.98
NEDD4-204ENST00000503468 TSPAN33Q86UF1 283 aa2.68□□□□□ -1.98
NEDD4-204ENST00000503468 GPAT4Q86UL3 456 aa2.68□□□□□ -1.98
NEDD4-204ENST00000503468 SLC47A2Q86VL8 602 aa2.68□□□□□ -1.98
NEDD4-204ENST00000503468 NIM1KQ8IY84 436 aa2.68□□□□□ -1.98
NEDD4-204ENST00000503468 LAS2Q8IYD9 372 aa2.68□□□□□ -1.98
NEDD4-204ENST00000503468 GPD1LQ8N335 351 aa2.68□□□□□ -1.98
NEDD4-204ENST00000503468 OR2T11Q8NH01 316 aa2.68□□□□□ -1.98
NEDD4-204ENST00000503468 ZNF778Q96MU6 729 aa2.68□□□□□ -1.98
NEDD4-204ENST00000503468 UCN2Q96RP3 112 aa2.68□□□□□ -1.98
NEDD4-204ENST00000503468 COPS4Q9BT78 406 aa2.68□□□□□ -1.98
NEDD4-204ENST00000503468 IFT27Q9BW83 186 aa2.68□□□□□ -1.98
NEDD4-204ENST00000503468 MED28Q9H204 178 aa2.68□□□□□ -1.98
NEDD4-204ENST00000503468 ZNF334Q9HCZ1 680 aaPredicted RBP2.68□□□□□ -1.98
NEDD4-204ENST00000503468 PDGFCQ9NRA1 345 aa2.68□□□□□ -1.98
NEDD4-204ENST00000503468 EXD2Q9NVH0 621 aa2.68□□□□□ -1.98
NEDD4-204ENST00000503468 PNPOQ9NVS9 261 aa2.68□□□□□ -1.98
NEDD4-204ENST00000503468 ADGRE2Q9UHX3 823 aa2.68□□□□□ -1.98
NEDD4-204ENST00000503468 HRH3Q9Y5N1 445 aa2.68□□□□□ -1.98
NEDD4-204ENST00000503468 TRIOO75962 3097 aa2.68□□□□□ -1.98
NEDD4-204ENST00000503468 PKD1L2Q7Z442 2459 aa2.68□□□□□ -1.98
NEDD4-204ENST00000503468 SYNJ2BP-COX16A0A087WUM0 186 aa2.67□□□□□ -1.98
NEDD4-204ENST00000503468 A0A087X1B8 175 aa2.67□□□□□ -1.98
NEDD4-204ENST00000503468 ABHD14A-ACY1A0A1B0GW23 586 aa2.67□□□□□ -1.98
NEDD4-204ENST00000503468 E5RJQ4 531 aa2.67□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms