RNA–Protein interactions for RNA: ENST00000502850.5

NUP54-202, Transcript of nucleoporin 54, humanhuman

TSL 1 (best)

Gene NUP54, Length 1,604 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-202ENST00000502850 XAF1Q6GPH4 301 aa11.49□□□□□ -0.57
NUP54-202ENST00000502850 FAM71E1Q6IPT2 247 aa11.49□□□□□ -0.57
NUP54-202ENST00000502850 FAHD1Q6P587 224 aa11.49□□□□□ -0.57
NUP54-202ENST00000502850 ANGPTL8Q6UXH0 198 aa11.49□□□□□ -0.57
NUP54-202ENST00000502850 ARMCX6Q7L4S7 300 aa11.49□□□□□ -0.57
NUP54-202ENST00000502850 TTC29Q8NA56 475 aaPredicted RBP11.49□□□□□ -0.57
NUP54-202ENST00000502850 MUL1Q969V5 352 aa11.49□□□□□ -0.57
NUP54-202ENST00000502850 TPD52L3Q96J77 140 aa11.49□□□□□ -0.57
NUP54-202ENST00000502850 PITX2Q99697 317 aa11.49□□□□□ -0.57
NUP54-202ENST00000502850 RHBGQ9H310 441 aa11.49□□□□□ -0.57
NUP54-202ENST00000502850 RUBCNLQ9H714 662 aa11.49□□□□□ -0.57
NUP54-202ENST00000502850 NT5DC2Q9H857 520 aa11.49□□□□□ -0.57
NUP54-202ENST00000502850 MIEF1Q9NQG6 463 aa11.49□□□□□ -0.57
NUP54-202ENST00000502850 VNN3Q9NY84 501 aa11.49□□□□□ -0.57
NUP54-202ENST00000502850 TAS2R9Q9NYW1 312 aa11.49□□□□□ -0.57
NUP54-202ENST00000502850 THAP10Q9P2Z0 257 aaPredicted RBP11.49□□□□□ -0.57
NUP54-202ENST00000502850 SPASTQ9UBP0 616 aa11.49□□□□□ -0.57
NUP54-202ENST00000502850 ANGPT4Q9Y264 503 aa11.49□□□□□ -0.57
NUP54-202ENST00000502850 BTBD3Q9Y2F9 522 aa11.49□□□□□ -0.57
NUP54-202ENST00000502850 COL4A3Q01955 1670 aa11.49□□□□□ -0.57
NUP54-202ENST00000502850 TBC1D3BA6NDS4 549 aa11.48□□□□□ -0.57
NUP54-202ENST00000502850 PRKACGP22612 351 aa11.48□□□□□ -0.57
NUP54-202ENST00000502850 CHI3L1P36222 383 aaPredicted RBP11.48□□□□□ -0.57
NUP54-202ENST00000502850 P2RY2P41231 377 aa11.48□□□□□ -0.57
NUP54-202ENST00000502850 CRATP43155 626 aa11.48□□□□□ -0.57
NUP54-202ENST00000502850 SELENOWP63302 87 aa11.48□□□□□ -0.57
NUP54-202ENST00000502850 SCARB2Q14108 478 aa11.48□□□□□ -0.57
NUP54-202ENST00000502850 AGERQ15109 404 aa11.48□□□□□ -0.57
NUP54-202ENST00000502850 CTU2Q2VPK5 515 aaKnown RBP11.48□□□□□ -0.57
NUP54-202ENST00000502850 DDX59Q5T1V6 619 aaKnown RBP eCLIP11.48□□□□□ -0.57
NUP54-202ENST00000502850 ADNP2Q6IQ32 1131 aa11.48□□□□□ -0.57
NUP54-202ENST00000502850 PNCKQ6P2M8 343 aa11.48□□□□□ -0.57
NUP54-202ENST00000502850 VTCN1Q7Z7D3 282 aa11.48□□□□□ -0.57
NUP54-202ENST00000502850 C11orf96Q7Z7L8 435 aa11.48□□□□□ -0.57
NUP54-202ENST00000502850 RBM23Q86U06 439 aaKnown RBP11.48□□□□□ -0.57
NUP54-202ENST00000502850 MMAAQ8IVH4 418 aaKnown RBP11.48□□□□□ -0.57
NUP54-202ENST00000502850 OR5K2Q8NHB8 316 aa11.48□□□□□ -0.57
NUP54-202ENST00000502850 IPCEF1Q8WWN9 437 aaPredicted RBP11.48□□□□□ -0.57
NUP54-202ENST00000502850 TFGQ92734 400 aaPredicted RBP11.48□□□□□ -0.57
NUP54-202ENST00000502850 ZNF764Q96H86 408 aaPredicted RBP11.48□□□□□ -0.57
NUP54-202ENST00000502850 DPH2Q9BQC3 489 aaPredicted RBP11.48□□□□□ -0.57
NUP54-202ENST00000502850 GABARAPL3Q9BY60 117 aa11.48□□□□□ -0.57
NUP54-202ENST00000502850 WASH6PQ9NQA3 447 aa11.48□□□□□ -0.57
NUP54-202ENST00000502850 THSD1Q9NS62 852 aa11.48□□□□□ -0.57
NUP54-202ENST00000502850 ACSL5Q9ULC5 683 aa11.48□□□□□ -0.57
NUP54-202ENST00000502850 ICKQ9UPZ9 632 aa11.48□□□□□ -0.57
NUP54-202ENST00000502850 C2orf16Q68DN1 1984 aa11.48□□□□□ -0.57
NUP54-202ENST00000502850 A0A1W2PRB8 838 aa11.47□□□□□ -0.57
NUP54-202ENST00000502850 ANKDD1BA6NHY2 528 aa11.47□□□□□ -0.57
NUP54-202ENST00000502850 KMOO15229 486 aa11.47□□□□□ -0.57
NUP54-202ENST00000502850 YY2O15391 372 aa11.47□□□□□ -0.57
NUP54-202ENST00000502850 TNFRSF21O75509 655 aa11.47□□□□□ -0.57
NUP54-202ENST00000502850 ATE1O95260 518 aa11.47□□□□□ -0.57
NUP54-202ENST00000502850 C6orf47O95873 294 aa11.47□□□□□ -0.57
NUP54-202ENST00000502850 BCL10O95999 233 aa11.47□□□□□ -0.57
NUP54-202ENST00000502850 ADH1BP00325 375 aa11.47□□□□□ -0.57
NUP54-202ENST00000502850 TGFB1P01137 390 aa11.47□□□□□ -0.57
NUP54-202ENST00000502850 EPHX1P07099 455 aa11.47□□□□□ -0.57
NUP54-202ENST00000502850 SLC35G4P0C7Q5 338 aa11.47□□□□□ -0.57
NUP54-202ENST00000502850 UQCRC2P22695 453 aa11.47□□□□□ -0.57
NUP54-202ENST00000502850 DAPP51397 102 aa11.47□□□□□ -0.57
NUP54-202ENST00000502850 CCR8P51685 355 aa11.47□□□□□ -0.57
NUP54-202ENST00000502850 METAP1P53582 386 aa11.47□□□□□ -0.57
NUP54-202ENST00000502850 RAB15P59190 212 aa11.47□□□□□ -0.57
NUP54-202ENST00000502850 TAS2R50P59544 299 aa11.47□□□□□ -0.57
NUP54-202ENST00000502850 HBA1P69905 142 aa11.47□□□□□ -0.57
NUP54-202ENST00000502850 KCNJ10P78508 379 aa11.47□□□□□ -0.57
NUP54-202ENST00000502850 CDK3Q00526 305 aa11.47□□□□□ -0.57
NUP54-202ENST00000502850 TEKQ02763 1124 aa11.47□□□□□ -0.57
NUP54-202ENST00000502850 TFF2Q03403 129 aa11.47□□□□□ -0.57
NUP54-202ENST00000502850 RAPSNQ13702 412 aa11.47□□□□□ -0.57
NUP54-202ENST00000502850 DUSP6Q16828 381 aa11.47□□□□□ -0.57
NUP54-202ENST00000502850 PROX2Q3B8N5 592 aa11.47□□□□□ -0.57
NUP54-202ENST00000502850 GTF2IRD2BQ6EKJ0 949 aa11.47□□□□□ -0.57
NUP54-202ENST00000502850 XKR5Q6UX68 686 aa11.47□□□□□ -0.57
NUP54-202ENST00000502850 CEP68Q76N32 757 aa11.47□□□□□ -0.57
NUP54-202ENST00000502850 CHST15Q7LFX5 561 aaPredicted RBP11.47□□□□□ -0.57
NUP54-202ENST00000502850 SLC9B2Q86UD5 537 aa11.47□□□□□ -0.57
NUP54-202ENST00000502850 GTF2IRD2Q86UP8 949 aa11.47□□□□□ -0.57
NUP54-202ENST00000502850 CYP4Z1Q86W10 505 aa11.47□□□□□ -0.57
NUP54-202ENST00000502850 HEATR4Q86WZ0 1026 aa11.47□□□□□ -0.57
NUP54-202ENST00000502850 BPIFB6Q8NFQ5 453 aa11.47□□□□□ -0.57
NUP54-202ENST00000502850 SPPL2AQ8TCT8 520 aa11.47□□□□□ -0.57
NUP54-202ENST00000502850 GEMIN6Q8WXD5 167 aaKnown RBP11.47□□□□□ -0.57
NUP54-202ENST00000502850 SMPDL3AQ92484 453 aa11.47□□□□□ -0.57
NUP54-202ENST00000502850 FGF13Q92913 245 aa11.47□□□□□ -0.57
NUP54-202ENST00000502850 C7orf34Q96L11 122 aa11.47□□□□□ -0.57
NUP54-202ENST00000502850 DCUN1D5Q9BTE7 237 aa11.47□□□□□ -0.57
NUP54-202ENST00000502850 RAB11FIP5Q9BXF6 653 aa11.47□□□□□ -0.57
NUP54-202ENST00000502850 NLNQ9BYT8 704 aa11.47□□□□□ -0.57
NUP54-202ENST00000502850 LHPPQ9H008 270 aa11.47□□□□□ -0.57
NUP54-202ENST00000502850 LMAN2LQ9H0V9 348 aa11.47□□□□□ -0.57
NUP54-202ENST00000502850 OR51B5Q9H339 312 aa11.47□□□□□ -0.57
NUP54-202ENST00000502850 LIN28AQ9H9Z2 209 aaKnown RBP11.47□□□□□ -0.57
NUP54-202ENST00000502850 NEUROD4Q9HD90 331 aa11.47□□□□□ -0.57
NUP54-202ENST00000502850 PALMDQ9NP74 551 aa11.47□□□□□ -0.57
NUP54-202ENST00000502850 ETAA1Q9NY74 926 aa11.47□□□□□ -0.57
NUP54-202ENST00000502850 PSME2Q9UL46 239 aa11.47□□□□□ -0.57
NUP54-202ENST00000502850 NDRG4Q9ULP0 352 aaKnown RBP11.47□□□□□ -0.57
NUP54-202ENST00000502850 ZNF99A8MXY4 864 aaPredicted RBP11.46□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms