RNA–Protein interactions for RNA: ENST00000498254.5

CALD1-224, Transcript of caldesmon 1, humanhuman

TSL 3

Gene CALD1, Length 443 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-224ENST00000498254 CLIP2Q9UDT6 1046 aa3.29□□□□□ -1.88
CALD1-224ENST00000498254 KCNN3Q9UGI6 736 aa3.29□□□□□ -1.88
CALD1-224ENST00000498254 FAM153AQ9UHL3 310 aa3.29□□□□□ -1.88
CALD1-224ENST00000498254 TSPAN16Q9UKR8 245 aa3.29□□□□□ -1.88
CALD1-224ENST00000498254 BLOC1S6Q9UL45 172 aa3.29□□□□□ -1.88
CALD1-224ENST00000498254 DNPEPQ9ULA0 475 aa3.29□□□□□ -1.88
CALD1-224ENST00000498254 SATB2Q9UPW6 733 aa3.29□□□□□ -1.88
CALD1-224ENST00000498254 AP1M2Q9Y6Q5 423 aa3.29□□□□□ -1.88
CALD1-224ENST00000498254 C2CD4DB7Z1M9 353 aa3.28□□□□□ -1.88
CALD1-224ENST00000498254 O00370 1275 aa3.28□□□□□ -1.88
CALD1-224ENST00000498254 RASGRF2O14827 1237 aa3.28□□□□□ -1.88
CALD1-224ENST00000498254 TEX28O15482 410 aa3.28□□□□□ -1.88
CALD1-224ENST00000498254 BUB3O43684 328 aa3.28□□□□□ -1.88
CALD1-224ENST00000498254 SOCS5O75159 536 aa3.28□□□□□ -1.88
CALD1-224ENST00000498254 TRMUO75648 421 aaKnown RBP3.28□□□□□ -1.88
CALD1-224ENST00000498254 DFFBO76075 338 aa3.28□□□□□ -1.88
CALD1-224ENST00000498254 OR6B1O95007 311 aa3.28□□□□□ -1.88
CALD1-224ENST00000498254 TRIM16O95361 564 aa3.28□□□□□ -1.88
CALD1-224ENST00000498254 CRYAAP02489 173 aa3.28□□□□□ -1.88
CALD1-224ENST00000498254 ODC1P11926 461 aa3.28□□□□□ -1.88
CALD1-224ENST00000498254 PRDX6P30041 224 aa3.28□□□□□ -1.88
CALD1-224ENST00000498254 DCTP40126 519 aa3.28□□□□□ -1.88
CALD1-224ENST00000498254 SLC1A3P43003 542 aa3.28□□□□□ -1.88
CALD1-224ENST00000498254 SSR1P43307 286 aaKnown RBP3.28□□□□□ -1.88
CALD1-224ENST00000498254 NSFP46459 744 aaKnown RBP3.28□□□□□ -1.88
CALD1-224ENST00000498254 OR3A3P47888 321 aa3.28□□□□□ -1.88
CALD1-224ENST00000498254 SLC26A5P58743 744 aa3.28□□□□□ -1.88
CALD1-224ENST00000498254 HERV-K104P63124 156 aa3.28□□□□□ -1.88
CALD1-224ENST00000498254 GAMTQ14353 236 aa3.28□□□□□ -1.88
CALD1-224ENST00000498254 TMEM132DQ14C87 1099 aa3.28□□□□□ -1.88
CALD1-224ENST00000498254 P2RY6Q15077 328 aa3.28□□□□□ -1.88
CALD1-224ENST00000498254 GTDC1Q4AE62 458 aa3.28□□□□□ -1.88
CALD1-224ENST00000498254 HSP90AA5PQ58FG0 334 aa3.28□□□□□ -1.88
CALD1-224ENST00000498254 CMPK2Q5EBM0 449 aa3.28□□□□□ -1.88
CALD1-224ENST00000498254 LYPLAL1Q5VWZ2 237 aa3.28□□□□□ -1.88
CALD1-224ENST00000498254 ZNF324BQ6AW86 544 aaPredicted RBP3.28□□□□□ -1.88
CALD1-224ENST00000498254 NEK5Q6P3R8 708 aa3.28□□□□□ -1.88
CALD1-224ENST00000498254 DLEU7Q6UYE1 221 aa3.28□□□□□ -1.88
CALD1-224ENST00000498254 RBMS3Q6XE24 437 aaKnown RBP3.28□□□□□ -1.88
CALD1-224ENST00000498254 TMEM64Q6YI46 380 aa3.28□□□□□ -1.88
CALD1-224ENST00000498254 RBM43Q6ZSC3 357 aaKnown RBP3.28□□□□□ -1.88
CALD1-224ENST00000498254 C9orf139Q6ZV77 190 aa3.28□□□□□ -1.88
CALD1-224ENST00000498254 SH2D5Q6ZV89 423 aa3.28□□□□□ -1.88
CALD1-224ENST00000498254 G2E3Q7L622 706 aa3.28□□□□□ -1.88
CALD1-224ENST00000498254 TRMT11Q7Z4G4 463 aaKnown RBP3.28□□□□□ -1.88
CALD1-224ENST00000498254 ADCK1Q86TW2 530 aa3.28□□□□□ -1.88
CALD1-224ENST00000498254 RBM23Q86U06 439 aaKnown RBP3.28□□□□□ -1.88
CALD1-224ENST00000498254 NFE4Q86UQ8 179 aa3.28□□□□□ -1.88
CALD1-224ENST00000498254 TRPV3Q8NET8 790 aa3.28□□□□□ -1.88
CALD1-224ENST00000498254 CCDC110Q8TBZ0 833 aa3.28□□□□□ -1.88
CALD1-224ENST00000498254 CHURC1Q8WUH1 139 aa3.28□□□□□ -1.88
CALD1-224ENST00000498254 TM9SF4Q92544 642 aa3.28□□□□□ -1.88
CALD1-224ENST00000498254 TMEM186Q96B77 213 aa3.28□□□□□ -1.88
CALD1-224ENST00000498254 ZNF274Q96GC6 653 aaPredicted RBP3.28□□□□□ -1.88
CALD1-224ENST00000498254 NECTIN4Q96NY8 510 aa3.28□□□□□ -1.88
CALD1-224ENST00000498254 TSGA13Q96PP4 275 aa3.28□□□□□ -1.88
CALD1-224ENST00000498254 MTMR12Q9C0I1 747 aa3.28□□□□□ -1.88
CALD1-224ENST00000498254 WWTR1Q9GZV5 400 aa3.28□□□□□ -1.88
CALD1-224ENST00000498254 FAM49AQ9H0Q0 323 aaPredicted RBP3.28□□□□□ -1.88
CALD1-224ENST00000498254 RAB17Q9H0T7 212 aa3.28□□□□□ -1.88
CALD1-224ENST00000498254 TMEM245Q9H330 911 aa3.28□□□□□ -1.88
CALD1-224ENST00000498254 ZNF665Q9H7R5 613 aa3.28□□□□□ -1.88
CALD1-224ENST00000498254 C3orf14Q9HBI5 128 aa3.28□□□□□ -1.88
CALD1-224ENST00000498254 ZFP57Q9NU63 452 aa3.28□□□□□ -1.88
CALD1-224ENST00000498254 HACD3Q9P035 362 aa3.28□□□□□ -1.88
CALD1-224ENST00000498254 POLKQ9UBT6 870 aa3.28□□□□□ -1.88
CALD1-224ENST00000498254 TRIM10Q9UDY6 481 aa3.28□□□□□ -1.88
CALD1-224ENST00000498254 IL36AQ9UHA7 158 aa3.28□□□□□ -1.88
CALD1-224ENST00000498254 PILRBQ9UKJ0 227 aa3.28□□□□□ -1.88
CALD1-224ENST00000498254 PLCL2Q9UPR0 1127 aa3.28□□□□□ -1.88
CALD1-224ENST00000498254 IGHV4-61A0A0C4DH41 118 aa3.27□□□□□ -1.89
CALD1-224ENST00000498254 A0A0U1RRA0 63 aa3.27□□□□□ -1.89
CALD1-224ENST00000498254 OGTO15294 1046 aa3.27□□□□□ -1.89
CALD1-224ENST00000498254 SYT7O43581 403 aa3.27□□□□□ -1.89
CALD1-224ENST00000498254 GLRA3O75311 464 aa3.27□□□□□ -1.89
CALD1-224ENST00000498254 NTN1O95631 604 aa3.27□□□□□ -1.89
CALD1-224ENST00000498254 IGHV4-59P01825 116 aa3.27□□□□□ -1.89
CALD1-224ENST00000498254 GPIP06744 558 aa3.27□□□□□ -1.89
CALD1-224ENST00000498254 PGK2P07205 417 aa3.27□□□□□ -1.89
CALD1-224ENST00000498254 PROS1P07225 676 aa3.27□□□□□ -1.89
CALD1-224ENST00000498254 HEXBP07686 556 aa3.27□□□□□ -1.89
CALD1-224ENST00000498254 ZCCHC18P0CG32 403 aa3.27□□□□□ -1.89
CALD1-224ENST00000498254 GP1BBP13224 206 aa3.27□□□□□ -1.89
CALD1-224ENST00000498254 ARF4P18085 180 aaPredicted RBP3.27□□□□□ -1.89
CALD1-224ENST00000498254 ITGB6P18564 788 aa3.27□□□□□ -1.89
CALD1-224ENST00000498254 ACP1P24666 158 aa3.27□□□□□ -1.89
CALD1-224ENST00000498254 THBS3P49746 956 aa3.27□□□□□ -1.89
CALD1-224ENST00000498254 GEMP55040 296 aa3.27□□□□□ -1.89
CALD1-224ENST00000498254 SP3Q02447 781 aa3.27□□□□□ -1.89
CALD1-224ENST00000498254 MAP2K1Q02750 393 aaPredicted RBP3.27□□□□□ -1.89
CALD1-224ENST00000498254 TSTA3Q13630 321 aaPredicted RBP3.27□□□□□ -1.89
CALD1-224ENST00000498254 CEACAM7Q14002 265 aa3.27□□□□□ -1.89
CALD1-224ENST00000498254 KEAP1Q14145 624 aa3.27□□□□□ -1.89
CALD1-224ENST00000498254 PTPN14Q15678 1187 aa3.27□□□□□ -1.89
CALD1-224ENST00000498254 C12orf60Q5U649 245 aa3.27□□□□□ -1.89
CALD1-224ENST00000498254 RAET1GQ6H3X3 334 aa3.27□□□□□ -1.89
CALD1-224ENST00000498254 IRGCQ6NXR0 463 aa3.27□□□□□ -1.89
CALD1-224ENST00000498254 SLC27A4Q6P1M0 643 aa3.27□□□□□ -1.89
CALD1-224ENST00000498254 SPSB3Q6PJ21 355 aa3.27□□□□□ -1.89
CALD1-224ENST00000498254 UNC5DQ6UXZ4 953 aa3.27□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms