RNA–Protein interactions for RNA: ENST00000498077.6

XRN1-214, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 5

Gene XRN1, Length 5,600 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-214ENST00000498077 TMEM74Q96NL1 305 aa1.37□□□□□ -2.19
XRN1-214ENST00000498077 LENG8Q96PV6 779 aaPredicted RBP1.37□□□□□ -2.19
XRN1-214ENST00000498077 ZFYVE21Q9BQ24 234 aa1.37□□□□□ -2.19
XRN1-214ENST00000498077 MACROD1Q9BQ69 325 aa1.37□□□□□ -2.19
XRN1-214ENST00000498077 HINT2Q9BX68 163 aa1.37□□□□□ -2.19
XRN1-214ENST00000498077 TMEM120AQ9BXJ8 343 aa1.37□□□□□ -2.19
XRN1-214ENST00000498077 HDAC8Q9BY41 377 aa1.37□□□□□ -2.19
XRN1-214ENST00000498077 KIR3DX1Q9H7L2 352 aa1.37□□□□□ -2.19
XRN1-214ENST00000498077 SYNDIG1Q9H7V2 258 aa1.37□□□□□ -2.19
XRN1-214ENST00000498077 RPF1Q9H9Y2 349 aaKnown RBP1.37□□□□□ -2.19
XRN1-214ENST00000498077 SPHK1Q9NYA1 384 aa1.37□□□□□ -2.19
XRN1-214ENST00000498077 DCDC2Q9UHG0 476 aa1.37□□□□□ -2.19
XRN1-214ENST00000498077 LIPT1Q9Y234 373 aa1.37□□□□□ -2.19
XRN1-214ENST00000498077 MRPL11Q9Y3B7 192 aaKnown RBP1.37□□□□□ -2.19
XRN1-214ENST00000498077 NPFFR2Q9Y5X5 522 aa1.37□□□□□ -2.19
XRN1-214ENST00000498077 ANKRD30AQ9BXX3 1397 aa1.37□□□□□ -2.19
XRN1-214ENST00000498077 EDC4Q6P2E9 1401 aaKnown RBP1.36□□□□□ -2.19
XRN1-214ENST00000498077 CSPG4Q6UVK1 2322 aa1.36□□□□□ -2.19
XRN1-214ENST00000498077 DOCK10Q96BY6 2186 aa1.36□□□□□ -2.19
XRN1-214ENST00000498077 TEX13DA0A0J9YY54 714 aaPredicted RBP1.36□□□□□ -2.19
XRN1-214ENST00000498077 ZNF816-ZNF321PA0A0X1KG74 233 aa1.36□□□□□ -2.19
XRN1-214ENST00000498077 A0A1W2PRB8 838 aa1.36□□□□□ -2.19
XRN1-214ENST00000498077 OR6C76A6NM76 312 aa1.36□□□□□ -2.19
XRN1-214ENST00000498077 CXorf49A8MYA2 514 aaPredicted RBP1.36□□□□□ -2.19
XRN1-214ENST00000498077 F8VP50 259 aa1.36□□□□□ -2.19
XRN1-214ENST00000498077 BET1O15155 118 aa1.36□□□□□ -2.19
XRN1-214ENST00000498077 PLPP2O43688 288 aa1.36□□□□□ -2.19
XRN1-214ENST00000498077 DNAJB6O75190 326 aa1.36□□□□□ -2.19
XRN1-214ENST00000498077 GRAP2O75791 330 aa1.36□□□□□ -2.19
XRN1-214ENST00000498077 OXSR1O95747 527 aaPredicted RBP1.36□□□□□ -2.19
XRN1-214ENST00000498077 CHRM5P08912 532 aaPredicted RBP1.36□□□□□ -2.19
XRN1-214ENST00000498077 FAM163BP0C2L3 166 aa1.36□□□□□ -2.19
XRN1-214ENST00000498077 GZMBP10144 247 aa1.36□□□□□ -2.19
XRN1-214ENST00000498077 ACP2P11117 423 aa1.36□□□□□ -2.19
XRN1-214ENST00000498077 CPMP14384 443 aa1.36□□□□□ -2.19
XRN1-214ENST00000498077 HOXD9P28356 352 aaPredicted RBP1.36□□□□□ -2.19
XRN1-214ENST00000498077 MAS1LP35410 378 aa1.36□□□□□ -2.19
XRN1-214ENST00000498077 LTBRP36941 435 aa1.36□□□□□ -2.19
XRN1-214ENST00000498077 BRCC3P46736 316 aa1.36□□□□□ -2.19
XRN1-214ENST00000498077 GABRA2P47869 451 aa1.36□□□□□ -2.19
XRN1-214ENST00000498077 AKR1C2P52895 323 aa1.36□□□□□ -2.19
XRN1-214ENST00000498077 EPHB3P54753 998 aa1.36□□□□□ -2.19
XRN1-214ENST00000498077 ACTR1AP61163 376 aa1.36□□□□□ -2.19
XRN1-214ENST00000498077 DLG4P78352 724 aa1.36□□□□□ -2.19
XRN1-214ENST00000498077 NFKB2Q00653 900 aa1.36□□□□□ -2.19
XRN1-214ENST00000498077 AKR1C1Q04828 323 aa1.36□□□□□ -2.19
XRN1-214ENST00000498077 ZNF816Q0VGE8 651 aaPredicted RBP1.36□□□□□ -2.19
XRN1-214ENST00000498077 KLF10Q13118 480 aa1.36□□□□□ -2.19
XRN1-214ENST00000498077 KNOP1Q1ED39 458 aaKnown RBP1.36□□□□□ -2.19
XRN1-214ENST00000498077 TRIM16LQ309B1 348 aa1.36□□□□□ -2.19
XRN1-214ENST00000498077 ACTBL2Q562R1 376 aa1.36□□□□□ -2.19
XRN1-214ENST00000498077 SPIN3Q5JUX0 258 aa1.36□□□□□ -2.19
XRN1-214ENST00000498077 FAM46CQ5VWP2 391 aa1.36□□□□□ -2.19
XRN1-214ENST00000498077 PAPD4Q6PIY7 484 aaKnown RBP1.36□□□□□ -2.19
XRN1-214ENST00000498077 TRIM65Q6PJ69 517 aa1.36□□□□□ -2.19
XRN1-214ENST00000498077 PRSS55Q6UWB4 352 aaPredicted RBP1.36□□□□□ -2.19
XRN1-214ENST00000498077 ASCL4Q6XD76 172 aa1.36□□□□□ -2.19
XRN1-214ENST00000498077 KDM7AQ6ZMT4 941 aa1.36□□□□□ -2.19
XRN1-214ENST00000498077 COX15Q7KZN9 410 aa1.36□□□□□ -2.19
XRN1-214ENST00000498077 CATIPQ7Z7H3 387 aa1.36□□□□□ -2.19
XRN1-214ENST00000498077 NAXDQ8IW45 347 aa1.36□□□□□ -2.19
XRN1-214ENST00000498077 RASGEF1CQ8N431 466 aa1.36□□□□□ -2.19
XRN1-214ENST00000498077 TTC39CQ8N584 583 aa1.36□□□□□ -2.19
XRN1-214ENST00000498077 GALNT11Q8NCW6 608 aa1.36□□□□□ -2.19
XRN1-214ENST00000498077 GRAPLQ8TC17 118 aaPredicted RBP1.36□□□□□ -2.19
XRN1-214ENST00000498077 ACER1Q8TDN7 264 aa1.36□□□□□ -2.19
XRN1-214ENST00000498077 UTP15Q8TED0 518 aaKnown RBP1.36□□□□□ -2.19
XRN1-214ENST00000498077 RAB8BQ92930 207 aa1.36□□□□□ -2.19
XRN1-214ENST00000498077 EXTL1Q92935 676 aa1.36□□□□□ -2.19
XRN1-214ENST00000498077 SLCO2A1Q92959 643 aa1.36□□□□□ -2.19
XRN1-214ENST00000498077 GLYATL1Q969I3 302 aa1.36□□□□□ -2.19
XRN1-214ENST00000498077 KTI12Q96EK9 354 aaPredicted RBP1.36□□□□□ -2.19
XRN1-214ENST00000498077 GPR82Q96P67 336 aa1.36□□□□□ -2.19
XRN1-214ENST00000498077 RBM14Q96PK6 669 aaKnown RBP1.36□□□□□ -2.19
XRN1-214ENST00000498077 WDR18Q9BV38 432 aa1.36□□□□□ -2.19
XRN1-214ENST00000498077 TM6SF1Q9BZW5 370 aa1.36□□□□□ -2.19
XRN1-214ENST00000498077 BRINP2Q9C0B6 783 aa1.36□□□□□ -2.19
XRN1-214ENST00000498077 MS4A7Q9GZW8 240 aaPredicted RBP1.36□□□□□ -2.19
XRN1-214ENST00000498077 RNF38Q9H0F5 515 aa1.36□□□□□ -2.19
XRN1-214ENST00000498077 MEGF9Q9H1U4 602 aa1.36□□□□□ -2.19
XRN1-214ENST00000498077 ADAMTS10Q9H324 1103 aa1.36□□□□□ -2.19
XRN1-214ENST00000498077 CWH43Q9H720 699 aa1.36□□□□□ -2.19
XRN1-214ENST00000498077 ABCB6Q9NP58 842 aa1.36□□□□□ -2.19
XRN1-214ENST00000498077 CD93Q9NPY3 652 aa1.36□□□□□ -2.19
XRN1-214ENST00000498077 CCDC177Q9NQR7 707 aaPredicted RBP1.36□□□□□ -2.19
XRN1-214ENST00000498077 PDLIM7Q9NR12 457 aa1.36□□□□□ -2.19
XRN1-214ENST00000498077 MED17Q9NVC6 651 aa1.36□□□□□ -2.19
XRN1-214ENST00000498077 ASNSD1Q9NWL6 643 aa1.36□□□□□ -2.19
XRN1-214ENST00000498077 NLKQ9UBE8 527 aa1.36□□□□□ -2.19
XRN1-214ENST00000498077 DBNLQ9UJU6 430 aaKnown RBP1.36□□□□□ -2.19
XRN1-214ENST00000498077 CLCA2Q9UQC9 943 aa1.36□□□□□ -2.19
XRN1-214ENST00000498077 USP3Q9Y6I4 520 aa1.36□□□□□ -2.19
XRN1-214ENST00000498077 ENPP4Q9Y6X5 453 aa1.36□□□□□ -2.19
XRN1-214ENST00000498077 GCN1Q92616 2671 aaKnown RBP1.36□□□□□ -2.19
XRN1-214ENST00000498077 IGKV2D-26A0A0A0MRZ7 120 aa1.36□□□□□ -2.19
XRN1-214ENST00000498077 A0A1W2PN81 502 aa1.36□□□□□ -2.19
XRN1-214ENST00000498077 TRIM64BA6NI03 449 aa1.36□□□□□ -2.19
XRN1-214ENST00000498077 FAM25AB3EWG3 89 aa1.36□□□□□ -2.19
XRN1-214ENST00000498077 FAM25CB3EWG5 89 aa1.36□□□□□ -2.19
XRN1-214ENST00000498077 FAM25GB3EWG6 89 aa1.36□□□□□ -2.19
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms