RNA–Protein interactions for RNA: ENST00000497106.5

USP54-215, Transcript of ubiquitin specific peptidase 54, humanhuman

TSL 2

Gene USP54, Length 4,773 nt, Biotype processed transcript, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP54-215ENST00000497106 SLC2A7Q6PXP3 512 aa8.01□□□□□ -1.13
USP54-215ENST00000497106 CSNK1A1LQ8N752 337 aa8.01□□□□□ -1.13
USP54-215ENST00000497106 RNF148Q8N7C7 305 aa8.01□□□□□ -1.13
USP54-215ENST00000497106 PROX1Q92786 737 aa8.01□□□□□ -1.13
USP54-215ENST00000497106 CLDN23Q96B33 292 aa8.01□□□□□ -1.13
USP54-215ENST00000497106 SLC35G5Q96KT7 338 aa8.01□□□□□ -1.13
USP54-215ENST00000497106 DUSP15Q9H1R2 295 aaPredicted RBP8.01□□□□□ -1.13
USP54-215ENST00000497106 UCK1Q9HA47 277 aa8.01□□□□□ -1.13
USP54-215ENST00000497106 EHD3Q9NZN3 535 aa8.01□□□□□ -1.13
USP54-215ENST00000497106 SELENONQ9NZV5 590 aa8.01□□□□□ -1.13
USP54-215ENST00000497106 FBXW2Q9UKT8 454 aa8.01□□□□□ -1.13
USP54-215ENST00000497106 ZNF451Q9Y4E5 1061 aa8.01□□□□□ -1.13
USP54-215ENST00000497106 PCDHB3Q9Y5E6 796 aa8.01□□□□□ -1.13
USP54-215ENST00000497106 CLIC1O00299 241 aa8.01□□□□□ -1.13
USP54-215ENST00000497106 ENTPD5O75356 428 aa8.01□□□□□ -1.13
USP54-215ENST00000497106 CSF2P04141 144 aa8.01□□□□□ -1.13
USP54-215ENST00000497106 UGT2B7P16662 529 aa8.01□□□□□ -1.13
USP54-215ENST00000497106 TNNI3P19429 210 aa8.01□□□□□ -1.13
USP54-215ENST00000497106 SLC7A1P30825 629 aa8.01□□□□□ -1.13
USP54-215ENST00000497106 MTAPQ13126 283 aa8.01□□□□□ -1.13
USP54-215ENST00000497106 CLCA4Q14CN2 919 aa8.01□□□□□ -1.13
USP54-215ENST00000497106 ZNF630Q2M218 657 aaPredicted RBP8.01□□□□□ -1.13
USP54-215ENST00000497106 C14orf28Q4W4Y0 310 aa8.01□□□□□ -1.13
USP54-215ENST00000497106 PQLC1Q8N2U9 271 aa8.01□□□□□ -1.13
USP54-215ENST00000497106 ZCCHC10Q8TBK6 192 aa8.01□□□□□ -1.13
USP54-215ENST00000497106 CHTF18Q8WVB6 975 aa8.01□□□□□ -1.13
USP54-215ENST00000497106 TCTN2Q96GX1 697 aa8.01□□□□□ -1.13
USP54-215ENST00000497106 SERTAD3Q9UJW9 196 aa8.01□□□□□ -1.13
USP54-215ENST00000497106 MRTO4Q9UKD2 239 aaKnown RBP8.01□□□□□ -1.13
USP54-215ENST00000497106 ICKQ9UPZ9 632 aa8.01□□□□□ -1.13
USP54-215ENST00000497106 PDE4DIPQ5VU43 2346 aa8.01□□□□□ -1.13
USP54-215ENST00000497106 JUNP05412 331 aaKnown RBP8.01□□□□□ -1.13
USP54-215ENST00000497106 DDCP20711 480 aa8.01□□□□□ -1.13
USP54-215ENST00000497106 GSK3BP49841 420 aa8.01□□□□□ -1.13
USP54-215ENST00000497106 CSNK1G2P78368 415 aa8.01□□□□□ -1.13
USP54-215ENST00000497106 GPLD1P80108 840 aa8.01□□□□□ -1.13
USP54-215ENST00000497106 MEF2AQ02078 507 aaPredicted RBP8.01□□□□□ -1.13
USP54-215ENST00000497106 MED21Q13503 144 aa8.01□□□□□ -1.13
USP54-215ENST00000497106 PTGR1Q14914 329 aa8.01□□□□□ -1.13
USP54-215ENST00000497106 CYP2R1Q6VVX0 501 aa8.01□□□□□ -1.13
USP54-215ENST00000497106 OR8J2Q8NGG1 315 aa8.01□□□□□ -1.13
USP54-215ENST00000497106 OR2T11Q8NH01 316 aa8.01□□□□□ -1.13
USP54-215ENST00000497106 PRR11Q96HE9 360 aaPredicted RBP8.01□□□□□ -1.13
USP54-215ENST00000497106 ZNF385DQ9H6B1 395 aa8.01□□□□□ -1.13
USP54-215ENST00000497106 FARSBQ9NSD9 589 aaKnown RBP8.01□□□□□ -1.13
USP54-215ENST00000497106 TAS2R9Q9NYW1 312 aa8.01□□□□□ -1.13
USP54-215ENST00000497106 GMEB2Q9UKD1 530 aa8.01□□□□□ -1.13
USP54-215ENST00000497106 UTS2RQ9UKP6 389 aa8.01□□□□□ -1.13
USP54-215ENST00000497106 ZNF232Q9UNY5 417 aa8.01□□□□□ -1.13
USP54-215ENST00000497106 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa8.01□□□□□ -1.13
USP54-215ENST00000497106 CXCR6O00574 342 aa8.01□□□□□ -1.13
USP54-215ENST00000497106 KRT36O76013 467 aa8.01□□□□□ -1.13
USP54-215ENST00000497106 IL3P08700 152 aa8.01□□□□□ -1.13
USP54-215ENST00000497106 HBQ1P09105 142 aa8.01□□□□□ -1.13
USP54-215ENST00000497106 FAM58BPP0C7Q3 252 aa8.01□□□□□ -1.13
USP54-215ENST00000497106 PXNP49023 591 aaPredicted RBP8.01□□□□□ -1.13
USP54-215ENST00000497106 DGKQP52824 942 aa8.01□□□□□ -1.13
USP54-215ENST00000497106 ARSFP54793 590 aa8.01□□□□□ -1.13
USP54-215ENST00000497106 GRM7Q14831 915 aa8.01□□□□□ -1.13
USP54-215ENST00000497106 CCSMST1Q4G0I0 132 aa8.01□□□□□ -1.13
USP54-215ENST00000497106 GALNT18Q6P9A2 607 aa8.01□□□□□ -1.13
USP54-215ENST00000497106 TICAM1Q8IUC6 712 aa8.01□□□□□ -1.13
USP54-215ENST00000497106 TMEFF1Q8IYR6 380 aa8.01□□□□□ -1.13
USP54-215ENST00000497106 METTL25Q8N6Q8 603 aa8.01□□□□□ -1.13
USP54-215ENST00000497106 MIPOL1Q8TD10 442 aa8.01□□□□□ -1.13
USP54-215ENST00000497106 FKBP10Q96AY3 582 aa8.01□□□□□ -1.13
USP54-215ENST00000497106 ART5Q96L15 291 aa8.01□□□□□ -1.13
USP54-215ENST00000497106 SEMA6CQ9H3T2 930 aa8.01□□□□□ -1.13
USP54-215ENST00000497106 C1GALT1Q9NS00 363 aa8.01□□□□□ -1.13
USP54-215ENST00000497106 FBXO4Q9UKT5 387 aa8.01□□□□□ -1.13
USP54-215ENST00000497106 KCNE1BA0A087WTH5 132 aa8□□□□□ -1.13
USP54-215ENST00000497106 OR5K3A6NET4 321 aa8□□□□□ -1.13
USP54-215ENST00000497106 SAP18O00422 153 aaKnown RBP8□□□□□ -1.13
USP54-215ENST00000497106 SUV39H1O43463 412 aa8□□□□□ -1.13
USP54-215ENST00000497106 GPR37L1O60883 481 aa8□□□□□ -1.13
USP54-215ENST00000497106 DCNP07585 359 aaKnown RBP8□□□□□ -1.13
USP54-215ENST00000497106 ALOX12P18054 663 aa8□□□□□ -1.13
USP54-215ENST00000497106 CAPN3P20807 821 aa8□□□□□ -1.13
USP54-215ENST00000497106 ALDH4A1P30038 563 aa8□□□□□ -1.13
USP54-215ENST00000497106 CA5AP35218 305 aa8□□□□□ -1.13
USP54-215ENST00000497106 RAD23AP54725 363 aa8□□□□□ -1.13
USP54-215ENST00000497106 TFF2Q03403 129 aa8□□□□□ -1.13
USP54-215ENST00000497106 GPR18Q14330 331 aa8□□□□□ -1.13
USP54-215ENST00000497106 FZD2Q14332 565 aa8□□□□□ -1.13
USP54-215ENST00000497106 ZNF542PQ5EBM4 170 aa8□□□□□ -1.13
USP54-215ENST00000497106 PIGGQ5H8A4 983 aa8□□□□□ -1.13
USP54-215ENST00000497106 MFSD4BQ5TF39 518 aa8□□□□□ -1.13
USP54-215ENST00000497106 CLEC4FQ8N1N0 589 aa8□□□□□ -1.13
USP54-215ENST00000497106 WDR48Q8TAF3 677 aa8□□□□□ -1.13
USP54-215ENST00000497106 GAB3Q8WWW8 586 aa8□□□□□ -1.13
USP54-215ENST00000497106 NCSTNQ92542 709 aa8□□□□□ -1.13
USP54-215ENST00000497106 F2RL3Q96RI0 385 aa8□□□□□ -1.13
USP54-215ENST00000497106 C17orf62Q9BQA9 187 aa8□□□□□ -1.13
USP54-215ENST00000497106 ERVMER34-1Q9H9K5 563 aa8□□□□□ -1.13
USP54-215ENST00000497106 SIRT5Q9NXA8 310 aa8□□□□□ -1.13
USP54-215ENST00000497106 SCOCQ9UIL1 159 aa8□□□□□ -1.13
USP54-215ENST00000497106 TMCC3Q9ULS5 477 aa8□□□□□ -1.13
USP54-215ENST00000497106 H0Y8X5 98 aa8□□□□□ -1.13
USP54-215ENST00000497106 NOL3O60936 208 aaKnown RBP8□□□□□ -1.13
USP54-215ENST00000497106 KRT20P35900 424 aa8□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms