RNA–Protein interactions for RNA: ENST00000496711.5

GARNL3-220, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 1 (best)

Gene GARNL3, Length 1,859 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-220ENST00000496711 PHF6Q8IWS0 365 aaKnown RBP eCLIP12.49□□□□□ -0.41
GARNL3-220ENST00000496711 HDDC3Q8N4P3 179 aa12.49□□□□□ -0.41
GARNL3-220ENST00000496711 SETD9Q8NE22 299 aa12.49□□□□□ -0.41
GARNL3-220ENST00000496711 CNDP2Q96KP4 475 aaKnown RBP12.49□□□□□ -0.41
GARNL3-220ENST00000496711 MENTQ9BUN1 341 aa12.49□□□□□ -0.41
GARNL3-220ENST00000496711 PCBD2Q9H0N5 130 aa12.49□□□□□ -0.41
GARNL3-220ENST00000496711 RHBGQ9H310 441 aa12.49□□□□□ -0.41
GARNL3-220ENST00000496711 RAD21L1Q9H4I0 556 aa12.49□□□□□ -0.41
GARNL3-220ENST00000496711 LIN28AQ9H9Z2 209 aaKnown RBP12.49□□□□□ -0.41
GARNL3-220ENST00000496711 MIEF1Q9NQG6 463 aa12.49□□□□□ -0.41
GARNL3-220ENST00000496711 MBNL1Q9NR56 388 aaKnown RBP12.49□□□□□ -0.41
GARNL3-220ENST00000496711 TAS2R9Q9NYW1 312 aa12.49□□□□□ -0.41
GARNL3-220ENST00000496711 AHSPQ9NZD4 102 aa12.49□□□□□ -0.41
GARNL3-220ENST00000496711 KIF17Q9P2E2 1029 aa12.49□□□□□ -0.41
GARNL3-220ENST00000496711 SERGEFQ9UGK8 458 aa12.49□□□□□ -0.41
GARNL3-220ENST00000496711 A0A1W2PP55 124 aa12.48□□□□□ -0.41
GARNL3-220ENST00000496711 ANKDD1BA6NHY2 528 aa12.48□□□□□ -0.41
GARNL3-220ENST00000496711 TNFRSF21O75509 655 aa12.48□□□□□ -0.41
GARNL3-220ENST00000496711 ETFAP13804 333 aa12.48□□□□□ -0.41
GARNL3-220ENST00000496711 TPP2P29144 1249 aaPredicted RBP12.48□□□□□ -0.41
GARNL3-220ENST00000496711 SERPINB1P30740 379 aa12.48□□□□□ -0.41
GARNL3-220ENST00000496711 POLR2IP36954 125 aaKnown RBP12.48□□□□□ -0.41
GARNL3-220ENST00000496711 PBX2P40425 430 aa12.48□□□□□ -0.41
GARNL3-220ENST00000496711 RXRGP48443 463 aa12.48□□□□□ -0.41
GARNL3-220ENST00000496711 DAPP51397 102 aa12.48□□□□□ -0.41
GARNL3-220ENST00000496711 REEP5Q00765 189 aa12.48□□□□□ -0.41
GARNL3-220ENST00000496711 RBBP4Q09028 425 aa12.48□□□□□ -0.41
GARNL3-220ENST00000496711 KEAP1Q14145 624 aa12.48□□□□□ -0.41
GARNL3-220ENST00000496711 COX20Q5RI15 118 aa12.48□□□□□ -0.41
GARNL3-220ENST00000496711 KHDRBS2Q5VWX1 349 aaKnown RBP12.48□□□□□ -0.41
GARNL3-220ENST00000496711 TRIM40Q6P9F5 258 aa12.48□□□□□ -0.41
GARNL3-220ENST00000496711 GALNT5Q7Z7M9 940 aa12.48□□□□□ -0.41
GARNL3-220ENST00000496711 ZNF513Q8N8E2 541 aaPredicted RBP12.48□□□□□ -0.41
GARNL3-220ENST00000496711 SMPDL3AQ92484 453 aa12.48□□□□□ -0.41
GARNL3-220ENST00000496711 DOK1Q99704 481 aa12.48□□□□□ -0.41
GARNL3-220ENST00000496711 DOHHQ9BU89 302 aa12.48□□□□□ -0.41
GARNL3-220ENST00000496711 SORBS1Q9BX66 1292 aaKnown RBP12.48□□□□□ -0.41
GARNL3-220ENST00000496711 MS4A8Q9BY19 250 aa12.48□□□□□ -0.41
GARNL3-220ENST00000496711 RIBC2Q9H4K1 309 aa12.48□□□□□ -0.41
GARNL3-220ENST00000496711 FANCEQ9HB96 536 aa12.48□□□□□ -0.41
GARNL3-220ENST00000496711 GPATCH2Q9NW75 528 aa12.48□□□□□ -0.41
GARNL3-220ENST00000496711 CUEDC1Q9NWM3 386 aaPredicted RBP12.48□□□□□ -0.41
GARNL3-220ENST00000496711 THUMPD1Q9NXG2 353 aaKnown RBP12.48□□□□□ -0.41
GARNL3-220ENST00000496711 PDP1Q9P0J1 537 aaPredicted RBP12.48□□□□□ -0.41
GARNL3-220ENST00000496711 PADI2Q9Y2J8 665 aa12.48□□□□□ -0.41
GARNL3-220ENST00000496711 OR1A2Q9Y585 309 aa12.48□□□□□ -0.41
GARNL3-220ENST00000496711 A0A1W2PRB8 838 aa12.48□□□□□ -0.41
GARNL3-220ENST00000496711 SLC1A7O00341 560 aa12.48□□□□□ -0.41
GARNL3-220ENST00000496711 PLPP1O14494 284 aa12.48□□□□□ -0.41
GARNL3-220ENST00000496711 NOL3O60936 208 aaKnown RBP12.48□□□□□ -0.41
GARNL3-220ENST00000496711 C9P02748 559 aa12.48□□□□□ -0.41
GARNL3-220ENST00000496711 GSTM2P28161 218 aa12.48□□□□□ -0.41
GARNL3-220ENST00000496711 GDI1P31150 447 aa12.48□□□□□ -0.41
GARNL3-220ENST00000496711 SOAT1P35610 550 aa12.48□□□□□ -0.41
GARNL3-220ENST00000496711 CHI3L1P36222 383 aaPredicted RBP12.48□□□□□ -0.41
GARNL3-220ENST00000496711 CCR8P51685 355 aa12.48□□□□□ -0.41
GARNL3-220ENST00000496711 CLCNKAP51800 687 aa12.48□□□□□ -0.41
GARNL3-220ENST00000496711 IL1RL1Q01638 556 aa12.48□□□□□ -0.41
GARNL3-220ENST00000496711 DMPKQ09013 629 aa12.48□□□□□ -0.41
GARNL3-220ENST00000496711 RAPSNQ13702 412 aa12.48□□□□□ -0.41
GARNL3-220ENST00000496711 SCARB2Q14108 478 aa12.48□□□□□ -0.41
GARNL3-220ENST00000496711 ITPRIPL2Q3MIP1 535 aa12.48□□□□□ -0.41
GARNL3-220ENST00000496711 IQCCQ4KMZ1 466 aa12.48□□□□□ -0.41
GARNL3-220ENST00000496711 GPR107Q5VW38 600 aa12.48□□□□□ -0.41
GARNL3-220ENST00000496711 DUS1LQ6P1R4 473 aaKnown RBP12.48□□□□□ -0.41
GARNL3-220ENST00000496711 RAB42Q8N4Z0 105 aa12.48□□□□□ -0.41
GARNL3-220ENST00000496711 TP53I13Q8NBR0 393 aaPredicted RBP12.48□□□□□ -0.41
GARNL3-220ENST00000496711 OR13F1Q8NGS4 319 aa12.48□□□□□ -0.41
GARNL3-220ENST00000496711 FBLIM1Q8WUP2 373 aa12.48□□□□□ -0.41
GARNL3-220ENST00000496711 ZNF566Q969W8 418 aa12.48□□□□□ -0.41
GARNL3-220ENST00000496711 ELSPBP1Q96BH3 223 aa12.48□□□□□ -0.41
GARNL3-220ENST00000496711 MAGED4Q96JG8 741 aa12.48□□□□□ -0.41
GARNL3-220ENST00000496711 C7orf34Q96L11 122 aa12.48□□□□□ -0.41
GARNL3-220ENST00000496711 MYADMQ96S97 322 aa12.48□□□□□ -0.41
GARNL3-220ENST00000496711 EPYCQ99645 322 aa12.48□□□□□ -0.41
GARNL3-220ENST00000496711 TMEM38AQ9H6F2 299 aa12.48□□□□□ -0.41
GARNL3-220ENST00000496711 PHPT1Q9NRX4 125 aaPredicted RBP12.48□□□□□ -0.41
GARNL3-220ENST00000496711 TMEM9Q9P0T7 183 aa12.48□□□□□ -0.41
GARNL3-220ENST00000496711 ACSL6Q9UKU0 697 aa12.48□□□□□ -0.41
GARNL3-220ENST00000496711 ACSL5Q9ULC5 683 aa12.48□□□□□ -0.41
GARNL3-220ENST00000496711 ATG2BQ96BY7 2078 aa12.47□□□□□ -0.41
GARNL3-220ENST00000496711 H3BMQ9 156 aa12.47□□□□□ -0.41
GARNL3-220ENST00000496711 JRKO75564 520 aa12.47□□□□□ -0.41
GARNL3-220ENST00000496711 GCM2O75603 506 aaPredicted RBP12.47□□□□□ -0.41
GARNL3-220ENST00000496711 ACP5P13686 325 aa12.47□□□□□ -0.41
GARNL3-220ENST00000496711 AGXTP21549 392 aa12.47□□□□□ -0.41
GARNL3-220ENST00000496711 PSMB5P28074 263 aa12.47□□□□□ -0.41
GARNL3-220ENST00000496711 TRIM23P36406 574 aa12.47□□□□□ -0.41
GARNL3-220ENST00000496711 SELENOWP63302 87 aa12.47□□□□□ -0.41
GARNL3-220ENST00000496711 CYP4F2P78329 520 aa12.47□□□□□ -0.41
GARNL3-220ENST00000496711 IL5RAQ01344 420 aa12.47□□□□□ -0.41
GARNL3-220ENST00000496711 ELOAQ14241 798 aaKnown RBP12.47□□□□□ -0.41
GARNL3-220ENST00000496711 PRSS53Q2L4Q9 553 aa12.47□□□□□ -0.41
GARNL3-220ENST00000496711 C2orf27AQ580R0 203 aa12.47□□□□□ -0.41
GARNL3-220ENST00000496711 DEPDC1Q5TB30 811 aa12.47□□□□□ -0.41
GARNL3-220ENST00000496711 ZNF776Q68DI1 518 aaPredicted RBP12.47□□□□□ -0.41
GARNL3-220ENST00000496711 XAF1Q6GPH4 301 aa12.47□□□□□ -0.41
GARNL3-220ENST00000496711 LAIR2Q6ISS4 152 aa12.47□□□□□ -0.41
GARNL3-220ENST00000496711 ANKRD53Q8N9V6 530 aa12.47□□□□□ -0.41
GARNL3-220ENST00000496711 ABHD11Q8NFV4 315 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms