RNA–Protein interactions for RNA: ENST00000496468.1

TSSC4-210, Transcript of tumor suppressing subtransferable candidate 4, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene TSSC4, Length 912 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSSC4-210ENST00000496468 RORAP35398 523 aa17.42■□□□□ 0.38
TSSC4-210ENST00000496468 SSR2P43308 183 aa17.42■□□□□ 0.38
TSSC4-210ENST00000496468 AVPR1BP47901 424 aa17.42■□□□□ 0.38
TSSC4-210ENST00000496468 SNRPNP63162 240 aaKnown RBP17.42■□□□□ 0.38
TSSC4-210ENST00000496468 HMGCS1Q01581 520 aa17.42■□□□□ 0.38
TSSC4-210ENST00000496468 UGT3A2Q3SY77 523 aa17.42■□□□□ 0.38
TSSC4-210ENST00000496468 DEFB134Q4QY38 66 aa17.42■□□□□ 0.38
TSSC4-210ENST00000496468 DEPDC1Q5TB30 811 aa17.42■□□□□ 0.38
TSSC4-210ENST00000496468 NIPAL1Q6NVV3 410 aa17.42■□□□□ 0.38
TSSC4-210ENST00000496468 PRMT9Q6P2P2 845 aa17.42■□□□□ 0.38
TSSC4-210ENST00000496468 PRSS41Q7RTY9 318 aa17.42■□□□□ 0.38
TSSC4-210ENST00000496468 DSELQ8IZU8 1212 aa17.42■□□□□ 0.38
TSSC4-210ENST00000496468 DTWD1Q8N5C7 304 aa17.42■□□□□ 0.38
TSSC4-210ENST00000496468 SLC38A9Q8NBW4 561 aa17.42■□□□□ 0.38
TSSC4-210ENST00000496468 GALNT6Q8NCL4 622 aa17.42■□□□□ 0.38
TSSC4-210ENST00000496468 ZNF578Q96N58 590 aaPredicted RBP17.42■□□□□ 0.38
TSSC4-210ENST00000496468 GBP5Q96PP8 586 aa17.42■□□□□ 0.38
TSSC4-210ENST00000496468 TUBB1Q9H4B7 451 aa17.42■□□□□ 0.38
TSSC4-210ENST00000496468 CCDC134Q9H6E4 229 aa17.42■□□□□ 0.38
TSSC4-210ENST00000496468 PFDN4Q9NQP4 134 aa17.42■□□□□ 0.38
TSSC4-210ENST00000496468 PNPOQ9NVS9 261 aa17.42■□□□□ 0.38
TSSC4-210ENST00000496468 NMRK1Q9NWW6 199 aa17.42■□□□□ 0.38
TSSC4-210ENST00000496468 NAALAD2Q9Y3Q0 740 aa17.42■□□□□ 0.38
TSSC4-210ENST00000496468 KNTC1P50748 2209 aa17.41■□□□□ 0.38
TSSC4-210ENST00000496468 SPTBP11277 2137 aa17.41■□□□□ 0.38
TSSC4-210ENST00000496468 SDK2Q58EX2 2172 aa17.41■□□□□ 0.38
TSSC4-210ENST00000496468 ZNF860A6NHJ4 632 aa17.41■□□□□ 0.38
TSSC4-210ENST00000496468 SLC28A1O00337 649 aa17.41■□□□□ 0.38
TSSC4-210ENST00000496468 PLPP1O14494 284 aa17.41■□□□□ 0.38
TSSC4-210ENST00000496468 RGS14O43566 566 aa17.41■□□□□ 0.38
TSSC4-210ENST00000496468 FOXS1O43638 330 aa17.41■□□□□ 0.38
TSSC4-210ENST00000496468 NSA2O95478 260 aaKnown RBP17.41■□□□□ 0.38
TSSC4-210ENST00000496468 LINC00032P0C843 101 aa17.41■□□□□ 0.38
TSSC4-210ENST00000496468 FBLP22087 321 aaKnown RBP17.41■□□□□ 0.38
TSSC4-210ENST00000496468 HK2P52789 917 aa17.41■□□□□ 0.38
TSSC4-210ENST00000496468 MAP7Q14244 749 aa17.41■□□□□ 0.38
TSSC4-210ENST00000496468 NR6A1Q15406 480 aa17.41■□□□□ 0.38
TSSC4-210ENST00000496468 TBC1D25Q3MII6 688 aa17.41■□□□□ 0.38
TSSC4-210ENST00000496468 ARHGAP40Q5TG30 622 aa17.41■□□□□ 0.38
TSSC4-210ENST00000496468 ABHD17CQ6PCB6 329 aa17.41■□□□□ 0.38
TSSC4-210ENST00000496468 C6orf15Q6UXA7 325 aaPredicted RBP17.41■□□□□ 0.38
TSSC4-210ENST00000496468 TRIM46Q7Z4K8 759 aa17.41■□□□□ 0.38
TSSC4-210ENST00000496468 OR9A4Q8NGU2 314 aa17.41■□□□□ 0.38
TSSC4-210ENST00000496468 PIWIL2Q8TC59 973 aaKnown RBP17.41■□□□□ 0.38
TSSC4-210ENST00000496468 RGMAQ96B86 450 aa17.41■□□□□ 0.38
TSSC4-210ENST00000496468 MMABQ96EY8 250 aaPredicted RBP17.41■□□□□ 0.38
TSSC4-210ENST00000496468 CCT7Q99832 543 aa17.41■□□□□ 0.38
TSSC4-210ENST00000496468 MRPL1Q9BYD6 325 aaKnown RBP17.41■□□□□ 0.38
TSSC4-210ENST00000496468 ROGDIQ9GZN7 287 aa17.41■□□□□ 0.38
TSSC4-210ENST00000496468 VPS29Q9UBQ0 182 aa17.41■□□□□ 0.38
TSSC4-210ENST00000496468 ACSL6Q9UKU0 697 aa17.41■□□□□ 0.38
TSSC4-210ENST00000496468 CDC14AQ9UNH5 594 aa17.41■□□□□ 0.38
TSSC4-210ENST00000496468 TEX51A0A1B0GUA7 166 aa17.4■□□□□ 0.38
TSSC4-210ENST00000496468 MED19A0JLT2 244 aaPredicted RBP17.4■□□□□ 0.38
TSSC4-210ENST00000496468 SLCO1B7G3V0H7 640 aa17.4■□□□□ 0.38
TSSC4-210ENST00000496468 H0YIG0 161 aa17.4■□□□□ 0.38
TSSC4-210ENST00000496468 SGK494L7N484 410 aa17.4■□□□□ 0.38
TSSC4-210ENST00000496468 MEN1O00255 615 aa17.4■□□□□ 0.38
TSSC4-210ENST00000496468 RTCAO00442 366 aaKnown RBP17.4■□□□□ 0.38
TSSC4-210ENST00000496468 GALR3O60755 368 aaPredicted RBP17.4■□□□□ 0.38
TSSC4-210ENST00000496468 RDH16O75452 317 aa17.4■□□□□ 0.38
TSSC4-210ENST00000496468 RSL1D1O76021 490 aaKnown RBP17.4■□□□□ 0.38
TSSC4-210ENST00000496468 B3GALT4O96024 378 aa17.4■□□□□ 0.38
TSSC4-210ENST00000496468 KLK3P07288 261 aaPredicted RBP17.4■□□□□ 0.38
TSSC4-210ENST00000496468 ATXN8OSP0DMR3 200 aa17.4■□□□□ 0.38
TSSC4-210ENST00000496468 SMIM10L1P0DMW3 83 aa17.4■□□□□ 0.38
TSSC4-210ENST00000496468 AGXTP21549 392 aa17.4■□□□□ 0.38
TSSC4-210ENST00000496468 CERS1P27544 350 aa17.4■□□□□ 0.38
TSSC4-210ENST00000496468 ARFIP1P53367 373 aa17.4■□□□□ 0.38
TSSC4-210ENST00000496468 BTN3A2P78410 334 aa17.4■□□□□ 0.38
TSSC4-210ENST00000496468 BTKQ06187 659 aa17.4■□□□□ 0.38
TSSC4-210ENST00000496468 ABHD18Q0P651 414 aa17.4■□□□□ 0.38
TSSC4-210ENST00000496468 XKR7Q5GH72 579 aa17.4■□□□□ 0.38
TSSC4-210ENST00000496468 ZNF385CQ66K41 422 aaPredicted RBP17.4■□□□□ 0.38
TSSC4-210ENST00000496468 NUDT13Q86X67 352 aa17.4■□□□□ 0.38
TSSC4-210ENST00000496468 PDSS2Q86YH6 399 aa17.4■□□□□ 0.38
TSSC4-210ENST00000496468 NLGN4XQ8N0W4 816 aa17.4■□□□□ 0.38
TSSC4-210ENST00000496468 ESX1Q8N693 406 aa17.4■□□□□ 0.38
TSSC4-210ENST00000496468 NLGN4YQ8NFZ3 816 aaPredicted RBP17.4■□□□□ 0.38
TSSC4-210ENST00000496468 SMIM10Q96HG1 83 aa17.4■□□□□ 0.38
TSSC4-210ENST00000496468 DPH2Q9BQC3 489 aaPredicted RBP17.4■□□□□ 0.38
TSSC4-210ENST00000496468 TBCDQ9BTW9 1192 aa17.4■□□□□ 0.38
TSSC4-210ENST00000496468 RIC8BQ9NVN3 520 aa17.4■□□□□ 0.38
TSSC4-210ENST00000496468 FAM53CQ9NYF3 392 aa17.4■□□□□ 0.38
TSSC4-210ENST00000496468 AHSPQ9NZD4 102 aa17.4■□□□□ 0.38
TSSC4-210ENST00000496468 VTI1BQ9UEU0 232 aa17.4■□□□□ 0.38
TSSC4-210ENST00000496468 MAU2Q9Y6X3 613 aa17.4■□□□□ 0.38
TSSC4-210ENST00000496468 CACNA1AO00555 2505 aa17.4■□□□□ 0.38
TSSC4-210ENST00000496468 IQCJ-SCHIP1C9J366 451 aaPredicted RBP17.39■□□□□ 0.37
TSSC4-210ENST00000496468 POLR3GO15318 223 aaPredicted RBP17.39■□□□□ 0.37
TSSC4-210ENST00000496468 HDAC3O15379 428 aa17.39■□□□□ 0.37
TSSC4-210ENST00000496468 RAD1O60671 282 aa17.39■□□□□ 0.37
TSSC4-210ENST00000496468 EDF1O60869 148 aaKnown RBP17.39■□□□□ 0.37
TSSC4-210ENST00000496468 JUNP05412 331 aaKnown RBP17.39■□□□□ 0.37
TSSC4-210ENST00000496468 ITGAXP20702 1163 aa17.39■□□□□ 0.37
TSSC4-210ENST00000496468 TSFMP43897 325 aaKnown RBP17.39■□□□□ 0.37
TSSC4-210ENST00000496468 OR1D4P47884 311 aa17.39■□□□□ 0.37
TSSC4-210ENST00000496468 MTTPP55157 894 aa17.39■□□□□ 0.37
TSSC4-210ENST00000496468 DCDP81605 110 aaKnown RBP17.39■□□□□ 0.37
TSSC4-210ENST00000496468 DSG2Q14126 1118 aa17.39■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms