RNA–Protein interactions for RNA: ENST00000496458.1

SF3B1-212, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2

Gene SF3B1, Length 475 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-212ENST00000496458 KIAA0556O60303 1618 aa4.55□□□□□ -1.68
SF3B1-212ENST00000496458 TLX2O43763 284 aaPredicted RBP4.55□□□□□ -1.68
SF3B1-212ENST00000496458 ECE2O60344 883 aa4.55□□□□□ -1.68
SF3B1-212ENST00000496458 TBX10O75333 385 aa4.55□□□□□ -1.68
SF3B1-212ENST00000496458 NXPH4O95158 308 aa4.55□□□□□ -1.68
SF3B1-212ENST00000496458 P4HA1P13674 534 aa4.55□□□□□ -1.68
SF3B1-212ENST00000496458 MYOGP15173 224 aa4.55□□□□□ -1.68
SF3B1-212ENST00000496458 ERCC2P18074 760 aa4.55□□□□□ -1.68
SF3B1-212ENST00000496458 PEX19P40855 299 aa4.55□□□□□ -1.68
SF3B1-212ENST00000496458 CD86P42081 329 aa4.55□□□□□ -1.68
SF3B1-212ENST00000496458 UBXN1Q04323 297 aa4.55□□□□□ -1.68
SF3B1-212ENST00000496458 AP1B1Q10567 949 aa4.55□□□□□ -1.68
SF3B1-212ENST00000496458 CAMK2DQ13557 499 aa4.55□□□□□ -1.68
SF3B1-212ENST00000496458 PARP10Q53GL7 1025 aa4.55□□□□□ -1.68
SF3B1-212ENST00000496458 KRBOX4Q5JUW0 171 aa4.55□□□□□ -1.68
SF3B1-212ENST00000496458 PPP1R21Q6ZMI0 780 aa4.55□□□□□ -1.68
SF3B1-212ENST00000496458 CDHR3Q6ZTQ4 885 aa4.55□□□□□ -1.68
SF3B1-212ENST00000496458 SH2D6Q7Z4S9 175 aa4.55□□□□□ -1.68
SF3B1-212ENST00000496458 AMIGO1Q86WK6 493 aa4.55□□□□□ -1.68
SF3B1-212ENST00000496458 ZNF597Q96LX8 424 aa4.55□□□□□ -1.68
SF3B1-212ENST00000496458 RPP25Q9BUL9 199 aaKnown RBP4.55□□□□□ -1.68
SF3B1-212ENST00000496458 TUBB1Q9H4B7 451 aa4.55□□□□□ -1.68
SF3B1-212ENST00000496458 NLGN3Q9NZ94 848 aa4.55□□□□□ -1.68
SF3B1-212ENST00000496458 PILRBQ9UKJ0 227 aa4.55□□□□□ -1.68
SF3B1-212ENST00000496458 RARRES3Q9UL19 164 aa4.55□□□□□ -1.68
SF3B1-212ENST00000496458 BLOC1S6Q9UL45 172 aa4.55□□□□□ -1.68
SF3B1-212ENST00000496458 AGTPBP1Q9UPW5 1226 aa4.55□□□□□ -1.68
SF3B1-212ENST00000496458 ADCY10Q96PN6 1610 aa4.54□□□□□ -1.68
SF3B1-212ENST00000496458 NPHP3Q7Z494 1330 aa4.54□□□□□ -1.68
SF3B1-212ENST00000496458 A0A087WZ39 114 aa4.54□□□□□ -1.68
SF3B1-212ENST00000496458 GLTPD2A6NH11 291 aa4.54□□□□□ -1.68
SF3B1-212ENST00000496458 SHISA7A6NL88 538 aa4.54□□□□□ -1.68
SF3B1-212ENST00000496458 SRRM5B3KS81 715 aa4.54□□□□□ -1.68
SF3B1-212ENST00000496458 SAP30O75446 220 aa4.54□□□□□ -1.68
SF3B1-212ENST00000496458 IFNAR1P17181 557 aa4.54□□□□□ -1.68
SF3B1-212ENST00000496458 EPORP19235 508 aa4.54□□□□□ -1.68
SF3B1-212ENST00000496458 ETV5P41161 510 aa4.54□□□□□ -1.68
SF3B1-212ENST00000496458 LIMK2P53671 638 aa4.54□□□□□ -1.68
SF3B1-212ENST00000496458 RAD23AP54725 363 aa4.54□□□□□ -1.68
SF3B1-212ENST00000496458 ZFP36L1Q07352 338 aaKnown RBP4.54□□□□□ -1.68
SF3B1-212ENST00000496458 FCHO2Q0JRZ9 810 aa4.54□□□□□ -1.68
SF3B1-212ENST00000496458 COG2Q14746 738 aa4.54□□□□□ -1.68
SF3B1-212ENST00000496458 DUSP5Q16690 384 aa4.54□□□□□ -1.68
SF3B1-212ENST00000496458 TCP11X2Q5H9J9 407 aa4.54□□□□□ -1.68
SF3B1-212ENST00000496458 TTC27Q6P3X3 843 aa4.54□□□□□ -1.68
SF3B1-212ENST00000496458 ALKBH5Q6P6C2 394 aaKnown RBP4.54□□□□□ -1.68
SF3B1-212ENST00000496458 UNC5DQ6UXZ4 953 aa4.54□□□□□ -1.68
SF3B1-212ENST00000496458 C3P1Q6ZMU1 363 aa4.54□□□□□ -1.68
SF3B1-212ENST00000496458 ZNF841Q6ZN19 808 aa4.54□□□□□ -1.68
SF3B1-212ENST00000496458 MCM10Q7L590 875 aa4.54□□□□□ -1.68
SF3B1-212ENST00000496458 PIGWQ7Z7B1 504 aa4.54□□□□□ -1.68
SF3B1-212ENST00000496458 ZNF619Q8N2I2 560 aa4.54□□□□□ -1.68
SF3B1-212ENST00000496458 LINC00612Q8N6U2 182 aa4.54□□□□□ -1.68
SF3B1-212ENST00000496458 OR52B6Q8NGF0 335 aa4.54□□□□□ -1.68
SF3B1-212ENST00000496458 GDAP1Q8TB36 358 aa4.54□□□□□ -1.68
SF3B1-212ENST00000496458 N4BP2L2Q92802 583 aaPredicted RBP4.54□□□□□ -1.68
SF3B1-212ENST00000496458 RMDN2Q96LZ7 410 aa4.54□□□□□ -1.68
SF3B1-212ENST00000496458 TSGA13Q96PP4 275 aa4.54□□□□□ -1.68
SF3B1-212ENST00000496458 CHCHD5Q9BSY4 110 aa4.54□□□□□ -1.68
SF3B1-212ENST00000496458 KATNB1Q9BVA0 655 aa4.54□□□□□ -1.68
SF3B1-212ENST00000496458 HEXA-AS1Q9H8Q6 139 aa4.54□□□□□ -1.68
SF3B1-212ENST00000496458 PHPT1Q9NRX4 125 aaPredicted RBP4.54□□□□□ -1.68
SF3B1-212ENST00000496458 FAM120CQ9NX05 1096 aaKnown RBP4.54□□□□□ -1.68
SF3B1-212ENST00000496458 TBK1Q9UHD2 729 aa4.54□□□□□ -1.68
SF3B1-212ENST00000496458 PLB1Q6P1J6 1458 aa4.54□□□□□ -1.68
SF3B1-212ENST00000496458 FHOD3Q2V2M9 1422 aa4.54□□□□□ -1.68
SF3B1-212ENST00000496458 UACAQ9BZF9 1416 aa4.54□□□□□ -1.68
SF3B1-212ENST00000496458 MYH14Q7Z406 1995 aaKnown RBP4.53□□□□□ -1.68
SF3B1-212ENST00000496458 A0A1W2PPW3 197 aa4.53□□□□□ -1.68
SF3B1-212ENST00000496458 F8VVB4 439 aa4.53□□□□□ -1.68
SF3B1-212ENST00000496458 F8VWA3 439 aa4.53□□□□□ -1.68
SF3B1-212ENST00000496458 HOXD4P09016 255 aaPredicted RBP4.53□□□□□ -1.68
SF3B1-212ENST00000496458 CD59P13987 128 aa4.53□□□□□ -1.68
SF3B1-212ENST00000496458 ITIH1P19827 911 aa4.53□□□□□ -1.68
SF3B1-212ENST00000496458 IL4RP24394 825 aa4.53□□□□□ -1.68
SF3B1-212ENST00000496458 EEF1DP29692 281 aaKnown RBP4.53□□□□□ -1.68
SF3B1-212ENST00000496458 DUTP33316 252 aaKnown RBP4.53□□□□□ -1.68
SF3B1-212ENST00000496458 HSD17B7P56937 341 aa4.53□□□□□ -1.68
SF3B1-212ENST00000496458 PEX6Q13608 980 aa4.53□□□□□ -1.68
SF3B1-212ENST00000496458 FAM106AQ4KMX7 169 aa4.53□□□□□ -1.68
SF3B1-212ENST00000496458 SLC25A30Q5SVS4 291 aa4.53□□□□□ -1.68
SF3B1-212ENST00000496458 PRSS55Q6UWB4 352 aaPredicted RBP4.53□□□□□ -1.68
SF3B1-212ENST00000496458 ANKRD33Q7Z3H0 272 aa4.53□□□□□ -1.68
SF3B1-212ENST00000496458 NLRP14Q86W24 1093 aa4.53□□□□□ -1.68
SF3B1-212ENST00000496458 FAM219AQ8IW50 185 aa4.53□□□□□ -1.68
SF3B1-212ENST00000496458 SLC39A11Q8N1S5 342 aa4.53□□□□□ -1.68
SF3B1-212ENST00000496458 RPLP0P6Q8NHW5 317 aa4.53□□□□□ -1.68
SF3B1-212ENST00000496458 VPS33AQ96AX1 596 aa4.53□□□□□ -1.68
SF3B1-212ENST00000496458 CCDC43Q96MW1 224 aaKnown RBP4.53□□□□□ -1.68
SF3B1-212ENST00000496458 NAA11Q9BSU3 229 aaPredicted RBP4.53□□□□□ -1.68
SF3B1-212ENST00000496458 SLC25A23Q9BV35 468 aa4.53□□□□□ -1.68
SF3B1-212ENST00000496458 FAM129AQ9BZQ8 928 aa4.53□□□□□ -1.68
SF3B1-212ENST00000496458 ST6GALNAC4Q9H4F1 302 aa4.53□□□□□ -1.68
SF3B1-212ENST00000496458 DCAF16Q9NXF7 216 aa4.53□□□□□ -1.68
SF3B1-212ENST00000496458 TP53TG3Q9ULZ0 132 aa4.53□□□□□ -1.68
SF3B1-212ENST00000496458 RABL2BQ9UNT1 228 aa4.53□□□□□ -1.68
SF3B1-212ENST00000496458 LIPGQ9Y5X9 500 aa4.53□□□□□ -1.68
SF3B1-212ENST00000496458 COLEC10Q9Y6Z7 277 aa4.53□□□□□ -1.68
SF3B1-212ENST00000496458 ARID2Q68CP9 1835 aa4.52□□□□□ -1.69
SF3B1-212ENST00000496458 A8MXE2 369 aa4.52□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 97.9 ms