RNA–Protein interactions for RNA: ENST00000496445.5

VTI1A-209, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 2

Gene VTI1A, Length 853 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-209ENST00000496445 NIPAL1Q6NVV3 410 aa13.41□□□□□ -0.26
VTI1A-209ENST00000496445 SLCO4C1Q6ZQN7 724 aa13.41□□□□□ -0.26
VTI1A-209ENST00000496445 QSOX2Q6ZRP7 698 aa13.41□□□□□ -0.26
VTI1A-209ENST00000496445 MAMDC2Q7Z304 686 aaPredicted RBP13.41□□□□□ -0.26
VTI1A-209ENST00000496445 TRPV3Q8NET8 790 aa13.41□□□□□ -0.26
VTI1A-209ENST00000496445 LPAR4Q99677 370 aa13.41□□□□□ -0.26
VTI1A-209ENST00000496445 GPR22Q99680 433 aa13.41□□□□□ -0.26
VTI1A-209ENST00000496445 KCNK13Q9HB14 408 aa13.41□□□□□ -0.26
VTI1A-209ENST00000496445 STMN3Q9NZ72 180 aa13.41□□□□□ -0.26
VTI1A-209ENST00000496445 TEKT2Q9UIF3 430 aa13.41□□□□□ -0.26
VTI1A-209ENST00000496445 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP13.41□□□□□ -0.26
VTI1A-209ENST00000496445 IGKV3D-11A0A0A0MRZ8 115 aa13.4□□□□□ -0.26
VTI1A-209ENST00000496445 PRAMEF4O60810 478 aa13.4□□□□□ -0.26
VTI1A-209ENST00000496445 B4GALT2O60909 372 aa13.4□□□□□ -0.26
VTI1A-209ENST00000496445 TBX6O95947 436 aaPredicted RBP13.4□□□□□ -0.26
VTI1A-209ENST00000496445 SERPINA6P08185 405 aa13.4□□□□□ -0.26
VTI1A-209ENST00000496445 STSP08842 583 aa13.4□□□□□ -0.26
VTI1A-209ENST00000496445 CCDC166P0CW27 439 aa13.4□□□□□ -0.26
VTI1A-209ENST00000496445 CD1DP15813 335 aa13.4□□□□□ -0.26
VTI1A-209ENST00000496445 JAK1P23458 1154 aa13.4□□□□□ -0.26
VTI1A-209ENST00000496445 MST1P26927 711 aa13.4□□□□□ -0.26
VTI1A-209ENST00000496445 HNRNPH1P31943 449 aaKnown RBP13.4□□□□□ -0.26
VTI1A-209ENST00000496445 SLC12A2P55011 1212 aa13.4□□□□□ -0.26
VTI1A-209ENST00000496445 OR4D2P58180 307 aa13.4□□□□□ -0.26
VTI1A-209ENST00000496445 BTG2P78543 158 aa13.4□□□□□ -0.26
VTI1A-209ENST00000496445 TUBA3CQ13748 450 aa13.4□□□□□ -0.26
VTI1A-209ENST00000496445 TRADDQ15628 312 aa13.4□□□□□ -0.26
VTI1A-209ENST00000496445 PRAMEF9Q5VWM5 478 aa13.4□□□□□ -0.26
VTI1A-209ENST00000496445 ADNP2Q6IQ32 1131 aa13.4□□□□□ -0.26
VTI1A-209ENST00000496445 TUBA3EQ6PEY2 450 aa13.4□□□□□ -0.26
VTI1A-209ENST00000496445 ZDHHC24Q6UX98 284 aa13.4□□□□□ -0.26
VTI1A-209ENST00000496445 MAATS1Q7Z4T9 603 aa13.4□□□□□ -0.26
VTI1A-209ENST00000496445 CA13Q8N1Q1 262 aa13.4□□□□□ -0.26
VTI1A-209ENST00000496445 KIF2BQ8N4N8 673 aa13.4□□□□□ -0.26
VTI1A-209ENST00000496445 MDS2Q8NDY4 140 aa13.4□□□□□ -0.26
VTI1A-209ENST00000496445 ELP5Q8TE02 316 aa13.4□□□□□ -0.26
VTI1A-209ENST00000496445 CDKL2Q92772 493 aa13.4□□□□□ -0.26
VTI1A-209ENST00000496445 ZNF354BQ96LW1 612 aa13.4□□□□□ -0.26
VTI1A-209ENST00000496445 SIGLEC12Q96PQ1 595 aa13.4□□□□□ -0.26
VTI1A-209ENST00000496445 CPNE1Q99829 537 aa13.4□□□□□ -0.26
VTI1A-209ENST00000496445 HES7Q9BYE0 225 aa13.4□□□□□ -0.26
VTI1A-209ENST00000496445 PHACTR1Q9C0D0 580 aa13.4□□□□□ -0.26
VTI1A-209ENST00000496445 ANKRD10Q9NXR5 420 aa13.4□□□□□ -0.26
VTI1A-209ENST00000496445 ABI3Q9P2A4 366 aa13.4□□□□□ -0.26
VTI1A-209ENST00000496445 COPG2Q9UBF2 871 aa13.4□□□□□ -0.26
VTI1A-209ENST00000496445 TCRBV16S1A1N1A0A5B0 115 aa13.39□□□□□ -0.27
VTI1A-209ENST00000496445 FAM155BO75949 473 aa13.39□□□□□ -0.27
VTI1A-209ENST00000496445 WISP2O76076 250 aa13.39□□□□□ -0.27
VTI1A-209ENST00000496445 RASAL1O95294 804 aa13.39□□□□□ -0.27
VTI1A-209ENST00000496445 C1GALT1C1LP0DN25 315 aa13.39□□□□□ -0.27
VTI1A-209ENST00000496445 GNAZP19086 355 aa13.39□□□□□ -0.27
VTI1A-209ENST00000496445 MAOAP21397 527 aa13.39□□□□□ -0.27
VTI1A-209ENST00000496445 GGT5P36269 586 aa13.39□□□□□ -0.27
VTI1A-209ENST00000496445 GP5P40197 560 aa13.39□□□□□ -0.27
VTI1A-209ENST00000496445 ACTN3Q08043 901 aaPredicted RBP13.39□□□□□ -0.27
VTI1A-209ENST00000496445 ILF2Q12905 390 aaKnown RBP13.39□□□□□ -0.27
VTI1A-209ENST00000496445 MEP1AQ16819 746 aa13.39□□□□□ -0.27
VTI1A-209ENST00000496445 ZNF766Q5HY98 468 aa13.39□□□□□ -0.27
VTI1A-209ENST00000496445 C1QL3Q5VWW1 255 aa13.39□□□□□ -0.27
VTI1A-209ENST00000496445 ZNF787Q6DD87 383 aa13.39□□□□□ -0.27
VTI1A-209ENST00000496445 CYS1Q717R9 158 aa13.39□□□□□ -0.27
VTI1A-209ENST00000496445 VN1R5Q7Z5H4 357 aa13.39□□□□□ -0.27
VTI1A-209ENST00000496445 SUN3Q8TAQ9 357 aa13.39□□□□□ -0.27
VTI1A-209ENST00000496445 FBXO25Q8TCJ0 367 aa13.39□□□□□ -0.27
VTI1A-209ENST00000496445 GAL3ST3Q96A11 431 aa13.39□□□□□ -0.27
VTI1A-209ENST00000496445 ESAMQ96AP7 390 aa13.39□□□□□ -0.27
VTI1A-209ENST00000496445 TSPAN17Q96FV3 270 aa13.39□□□□□ -0.27
VTI1A-209ENST00000496445 PTCHD1Q96NR3 888 aa13.39□□□□□ -0.27
VTI1A-209ENST00000496445 NECTIN3Q9NQS3 549 aa13.39□□□□□ -0.27
VTI1A-209ENST00000496445 WWOXQ9NZC7 414 aa13.39□□□□□ -0.27
VTI1A-209ENST00000496445 ASB1Q9Y576 335 aa13.39□□□□□ -0.27
VTI1A-209ENST00000496445 CSMD2Q7Z408 3487 aa13.38□□□□□ -0.27
VTI1A-209ENST00000496445 A0A0G2JN53 185 aa13.38□□□□□ -0.27
VTI1A-209ENST00000496445 URADA6NGE7 173 aa13.38□□□□□ -0.27
VTI1A-209ENST00000496445 SAGE2PA6NJ88 616 aa13.38□□□□□ -0.27
VTI1A-209ENST00000496445 FAM227AF5H4B4 570 aa13.38□□□□□ -0.27
VTI1A-209ENST00000496445 TGFBR3LH3BV60 316 aa13.38□□□□□ -0.27
VTI1A-209ENST00000496445 PRMT3O60678 531 aa13.38□□□□□ -0.27
VTI1A-209ENST00000496445 RNH1P13489 461 aaKnown RBP13.38□□□□□ -0.27
VTI1A-209ENST00000496445 STMN1P16949 149 aa13.38□□□□□ -0.27
VTI1A-209ENST00000496445 EPORP19235 508 aa13.38□□□□□ -0.27
VTI1A-209ENST00000496445 CD22P20273 847 aa13.38□□□□□ -0.27
VTI1A-209ENST00000496445 CASQ1P31415 396 aa13.38□□□□□ -0.27
VTI1A-209ENST00000496445 CD96P40200 585 aa13.38□□□□□ -0.27
VTI1A-209ENST00000496445 HSPA7P48741 367 aa13.38□□□□□ -0.27
VTI1A-209ENST00000496445 PLTPP55058 493 aa13.38□□□□□ -0.27
VTI1A-209ENST00000496445 DLG1Q12959 904 aa13.38□□□□□ -0.27
VTI1A-209ENST00000496445 EFTUD2Q15029 972 aaKnown RBP eCLIP13.38□□□□□ -0.273e-6■■■■■ 41.9
VTI1A-209ENST00000496445 OR1C1Q15619 314 aa13.38□□□□□ -0.27
VTI1A-209ENST00000496445 KBTBD12Q3ZCT8 623 aa13.38□□□□□ -0.27
VTI1A-209ENST00000496445 ZNF468Q5VIY5 522 aaPredicted RBP13.38□□□□□ -0.27
VTI1A-209ENST00000496445 TMIGD1Q6UXZ0 262 aa13.38□□□□□ -0.27
VTI1A-209ENST00000496445 C3orf62Q6ZUJ4 267 aa13.38□□□□□ -0.27
VTI1A-209ENST00000496445 ZNF572Q7Z3I7 529 aaPredicted RBP13.38□□□□□ -0.27
VTI1A-209ENST00000496445 CMC1Q7Z7K0 106 aa13.38□□□□□ -0.27
VTI1A-209ENST00000496445 TCAIMQ8N3R3 496 aa13.38□□□□□ -0.27
VTI1A-209ENST00000496445 PDPRQ8NCN5 879 aa13.38□□□□□ -0.27
VTI1A-209ENST00000496445 TMEM52Q8NDY8 209 aa13.38□□□□□ -0.27
VTI1A-209ENST00000496445 NFAM1Q8NET5 270 aaPredicted RBP13.38□□□□□ -0.27
VTI1A-209ENST00000496445 MS4A6EQ96DS6 147 aa13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms