RNA–Protein interactions for RNA: ENST00000496441.5

CDCA7-208, Transcript of cell division cycle associated 7, humanhuman

TSL 2

Gene CDCA7, Length 2,943 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA7-208ENST00000496441 REEP4Q9H6H4 257 aa11.06□□□□□ -0.64
CDCA7-208ENST00000496441 LTBP2Q14767 1821 aa11.05□□□□□ -0.64
CDCA7-208ENST00000496441 C1orf226A1L170 272 aa11.05□□□□□ -0.64
CDCA7-208ENST00000496441 IGLON5A6NGN9 336 aa11.05□□□□□ -0.64
CDCA7-208ENST00000496441 GLOD5A6NK44 160 aa11.05□□□□□ -0.64
CDCA7-208ENST00000496441 ZNF99A8MXY4 864 aaPredicted RBP11.05□□□□□ -0.64
CDCA7-208ENST00000496441 UGDHO60701 494 aa11.05□□□□□ -0.64
CDCA7-208ENST00000496441 UGT2B11O75310 529 aa11.05□□□□□ -0.64
CDCA7-208ENST00000496441 ALPPL2P10696 532 aa11.05□□□□□ -0.64
CDCA7-208ENST00000496441 PNLIPRP1P54315 467 aa11.05□□□□□ -0.64
CDCA7-208ENST00000496441 NCS1P62166 190 aa11.05□□□□□ -0.64
CDCA7-208ENST00000496441 HTRA4P83105 476 aaPredicted RBP11.05□□□□□ -0.64
CDCA7-208ENST00000496441 SCARB2Q14108 478 aa11.05□□□□□ -0.64
CDCA7-208ENST00000496441 NR1D2Q14995 579 aa11.05□□□□□ -0.64
CDCA7-208ENST00000496441 FAM78AQ5JUQ0 283 aa11.05□□□□□ -0.64
CDCA7-208ENST00000496441 FAM109BQ6ICB4 259 aaPredicted RBP11.05□□□□□ -0.64
CDCA7-208ENST00000496441 TTC23LQ6PF05 361 aa11.05□□□□□ -0.64
CDCA7-208ENST00000496441 TMIGD1Q6UXZ0 262 aa11.05□□□□□ -0.64
CDCA7-208ENST00000496441 SLC5A8Q8N695 610 aa11.05□□□□□ -0.64
CDCA7-208ENST00000496441 CELF5Q8N6W0 485 aaKnown RBP11.05□□□□□ -0.64
CDCA7-208ENST00000496441 C16orf78Q8WTQ4 265 aa11.05□□□□□ -0.64
CDCA7-208ENST00000496441 FAR1Q8WVX9 515 aa11.05□□□□□ -0.64
CDCA7-208ENST00000496441 C11orf24Q96F05 449 aaPredicted RBP11.05□□□□□ -0.64
CDCA7-208ENST00000496441 SLC6A16Q9GZN6 736 aa11.05□□□□□ -0.64
CDCA7-208ENST00000496441 TRIT1Q9H3H1 467 aaKnown RBP11.05□□□□□ -0.64
CDCA7-208ENST00000496441 DMRT3Q9NQL9 472 aa11.05□□□□□ -0.64
CDCA7-208ENST00000496441 SCN3BQ9NY72 215 aa11.05□□□□□ -0.64
CDCA7-208ENST00000496441 SLC6A14Q9UN76 642 aa11.05□□□□□ -0.64
CDCA7-208ENST00000496441 SNX11Q9Y5W9 270 aa11.05□□□□□ -0.64
CDCA7-208ENST00000496441 PLXNA2O75051 1894 aa11.05□□□□□ -0.64
CDCA7-208ENST00000496441 ANKDD1BA6NHY2 528 aa11.05□□□□□ -0.64
CDCA7-208ENST00000496441 QSOX1O00391 747 aa11.05□□□□□ -0.64
CDCA7-208ENST00000496441 TPST2O60704 377 aa11.05□□□□□ -0.64
CDCA7-208ENST00000496441 EPHA5P54756 1037 aa11.05□□□□□ -0.64
CDCA7-208ENST00000496441 TMBIM6P55061 237 aa11.05□□□□□ -0.64
CDCA7-208ENST00000496441 PERM1Q5SV97 790 aa11.05□□□□□ -0.64
CDCA7-208ENST00000496441 ERICH5Q6P6B1 374 aa11.05□□□□□ -0.64
CDCA7-208ENST00000496441 SLCO6A1Q86UG4 719 aa11.05□□□□□ -0.64
CDCA7-208ENST00000496441 GALNT13Q8IUC8 556 aa11.05□□□□□ -0.64
CDCA7-208ENST00000496441 P3H2Q8IVL5 708 aa11.05□□□□□ -0.64
CDCA7-208ENST00000496441 TMCO5AQ8N6Q1 288 aa11.05□□□□□ -0.64
CDCA7-208ENST00000496441 TFGQ92734 400 aaPredicted RBP11.05□□□□□ -0.64
CDCA7-208ENST00000496441 EXOSC8Q96B26 276 aaKnown RBP11.05□□□□□ -0.64
CDCA7-208ENST00000496441 PLEKHA8Q96JA3 519 aa11.05□□□□□ -0.64
CDCA7-208ENST00000496441 COQ10AQ96MF6 247 aa11.05□□□□□ -0.64
CDCA7-208ENST00000496441 VPS35Q96QK1 796 aa11.05□□□□□ -0.64
CDCA7-208ENST00000496441 APOL4Q9BPW4 351 aa11.05□□□□□ -0.64
CDCA7-208ENST00000496441 NIPSNAP1Q9BPW8 284 aa11.05□□□□□ -0.64
CDCA7-208ENST00000496441 DOHHQ9BU89 302 aa11.05□□□□□ -0.64
CDCA7-208ENST00000496441 TBC1D23Q9NUY8 699 aa11.05□□□□□ -0.64
CDCA7-208ENST00000496441 PCDHGA10Q9Y5H3 936 aa11.05□□□□□ -0.64
CDCA7-208ENST00000496441 SDK1Q7Z5N4 2213 aa11.05□□□□□ -0.64
CDCA7-208ENST00000496441 A0A1W2PRB8 838 aa11.05□□□□□ -0.64
CDCA7-208ENST00000496441 LINC01553A4QN01 128 aa11.05□□□□□ -0.64
CDCA7-208ENST00000496441 M0R3G1 203 aa11.05□□□□□ -0.64
CDCA7-208ENST00000496441 SLC9A3R1O14745 358 aaPredicted RBP11.05□□□□□ -0.64
CDCA7-208ENST00000496441 SLC16A6O15403 523 aa11.05□□□□□ -0.64
CDCA7-208ENST00000496441 HSMCR30P0CW71 290 aa11.05□□□□□ -0.64
CDCA7-208ENST00000496441 DDX6P26196 483 aaKnown RBP eCLIP11.05□□□□□ -0.64
CDCA7-208ENST00000496441 MASP1P48740 699 aa11.05□□□□□ -0.64
CDCA7-208ENST00000496441 PRAMEF14Q5SWL7 426 aa11.05□□□□□ -0.64
CDCA7-208ENST00000496441 ANXA8L1Q5VT79 327 aa11.05□□□□□ -0.64
CDCA7-208ENST00000496441 PRAMEF13Q5VWM6 474 aa11.05□□□□□ -0.64
CDCA7-208ENST00000496441 KIAA1614Q5VZ46 1190 aa11.05□□□□□ -0.64
CDCA7-208ENST00000496441 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP11.05□□□□□ -0.64
CDCA7-208ENST00000496441 SLC16A12Q6ZSM3 486 aa11.05□□□□□ -0.64
CDCA7-208ENST00000496441 ALDH16A1Q8IZ83 802 aa11.05□□□□□ -0.64
CDCA7-208ENST00000496441 CACTIN-AS1Q8N1I8 211 aa11.05□□□□□ -0.64
CDCA7-208ENST00000496441 SETD9Q8NE22 299 aa11.05□□□□□ -0.64
CDCA7-208ENST00000496441 OR52E4Q8NGH9 312 aa11.05□□□□□ -0.64
CDCA7-208ENST00000496441 FNDC8Q8TC99 324 aa11.05□□□□□ -0.64
CDCA7-208ENST00000496441 CXorf40AQ8TE69 158 aa11.05□□□□□ -0.64
CDCA7-208ENST00000496441 JPH3Q8WXH2 748 aaPredicted RBP11.05□□□□□ -0.64
CDCA7-208ENST00000496441 SUSD6Q92537 303 aa11.05□□□□□ -0.64
CDCA7-208ENST00000496441 TAMM41Q96BW9 452 aa11.05□□□□□ -0.64
CDCA7-208ENST00000496441 ZNF707Q96C28 371 aaPredicted RBP11.05□□□□□ -0.64
CDCA7-208ENST00000496441 C7orf34Q96L11 122 aa11.05□□□□□ -0.64
CDCA7-208ENST00000496441 HHIPQ96QV1 700 aa11.05□□□□□ -0.64
CDCA7-208ENST00000496441 DOK1Q99704 481 aa11.05□□□□□ -0.64
CDCA7-208ENST00000496441 TUBA1CQ9BQE3 449 aa11.05□□□□□ -0.64
CDCA7-208ENST00000496441 ALOXE3Q9BYJ1 711 aa11.05□□□□□ -0.64
CDCA7-208ENST00000496441 BRF2Q9HAW0 419 aa11.05□□□□□ -0.64
CDCA7-208ENST00000496441 RAD18Q9NS91 495 aa11.05□□□□□ -0.64
CDCA7-208ENST00000496441 NDUFAF4Q9P032 175 aa11.05□□□□□ -0.64
CDCA7-208ENST00000496441 NME6O75414 186 aaPredicted RBP11.04□□□□□ -0.64
CDCA7-208ENST00000496441 PAK4O96013 591 aaPredicted RBP11.04□□□□□ -0.64
CDCA7-208ENST00000496441 C9P02748 559 aa11.04□□□□□ -0.64
CDCA7-208ENST00000496441 PCMT1P22061 227 aa11.04□□□□□ -0.64
CDCA7-208ENST00000496441 OPRL1P41146 370 aa11.04□□□□□ -0.64
CDCA7-208ENST00000496441 IL12RB1P42701 662 aa11.04□□□□□ -0.64
CDCA7-208ENST00000496441 EXOC3L2Q2M3D2 409 aa11.04□□□□□ -0.64
CDCA7-208ENST00000496441 HNRNPA1L2Q32P51 320 aaKnown RBP11.04□□□□□ -0.64
CDCA7-208ENST00000496441 RFX4Q33E94 735 aa11.04□□□□□ -0.64
CDCA7-208ENST00000496441 PAGE2BQ5JRK9 111 aa11.04□□□□□ -0.64
CDCA7-208ENST00000496441 C1orf53Q5VUE5 145 aa11.04□□□□□ -0.64
CDCA7-208ENST00000496441 NXPE4Q6UWF7 544 aa11.04□□□□□ -0.64
CDCA7-208ENST00000496441 GANCQ8TET4 914 aa11.04□□□□□ -0.64
CDCA7-208ENST00000496441 FAM129BQ96TA1 746 aa11.04□□□□□ -0.64
CDCA7-208ENST00000496441 ZDHHC5Q9C0B5 715 aa11.04□□□□□ -0.64
CDCA7-208ENST00000496441 ZCCHC2Q9C0B9 1178 aaKnown RBP11.04□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms