RNA–Protein interactions for RNA: ENST00000496030.1

APTX-233, Transcript of aprataxin, human

TSL 3

Gene APTX, Length 633 nt, Biotype retained intron, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
APTX-233	ENST00000496030	MUM1	Q2TAK8	710 aa		11.29	□□□□□ -0.6
APTX-233	ENST00000496030	GGTA1P	Q4G0N0	100 aa		11.29	□□□□□ -0.6
APTX-233	ENST00000496030	NKAIN1	Q4KMZ8	207 aa		11.29	□□□□□ -0.6
APTX-233	ENST00000496030	PAGE2B	Q5JRK9	111 aa		11.29	□□□□□ -0.6
APTX-233	ENST00000496030	LIPM	Q5VYY2	423 aa		11.29	□□□□□ -0.6
APTX-233	ENST00000496030	MED27	Q6P2C8	311 aa		11.29	□□□□□ -0.6
APTX-233	ENST00000496030	FAM198B	Q6UWH4	519 aa		11.29	□□□□□ -0.6
APTX-233	ENST00000496030	FRMD7	Q6ZUT3	714 aa		11.29	□□□□□ -0.6
APTX-233	ENST00000496030	COX15	Q7KZN9	410 aa		11.29	□□□□□ -0.6
APTX-233	ENST00000496030	UBE3D	Q7Z6J8	389 aa		11.29	□□□□□ -0.6
APTX-233	ENST00000496030	MILR1	Q7Z6M3	343 aa		11.29	□□□□□ -0.6
APTX-233	ENST00000496030	VASH2	Q86V25	355 aa		11.29	□□□□□ -0.6
APTX-233	ENST00000496030	PTRH1	Q86Y79	214 aa	Known RBP	11.29	□□□□□ -0.6
APTX-233	ENST00000496030	RNF175	Q8N4F7	328 aa		11.29	□□□□□ -0.6
APTX-233	ENST00000496030	TBC1D19	Q8N5T2	526 aa		11.29	□□□□□ -0.6
APTX-233	ENST00000496030	CCNYL1	Q8N7R7	359 aa		11.29	□□□□□ -0.6
APTX-233	ENST00000496030	AMER3	Q8N944	861 aa		11.29	□□□□□ -0.6
APTX-233	ENST00000496030	CCDC63	Q8NA47	563 aa		11.29	□□□□□ -0.6
APTX-233	ENST00000496030	TTC29	Q8NA56	475 aa	Predicted RBP	11.29	□□□□□ -0.6
APTX-233	ENST00000496030	TRPV3	Q8NET8	790 aa		11.29	□□□□□ -0.6
APTX-233	ENST00000496030	UTP15	Q8TED0	518 aa	Known RBP	11.29	□□□□□ -0.6
APTX-233	ENST00000496030	MR1	Q95460	341 aa		11.29	□□□□□ -0.6
APTX-233	ENST00000496030	ZNF382	Q96SR6	550 aa		11.29	□□□□□ -0.6
APTX-233	ENST00000496030	DPH2	Q9BQC3	489 aa	Predicted RBP	11.29	□□□□□ -0.6
APTX-233	ENST00000496030	STMN4	Q9H169	189 aa	Predicted RBP	11.29	□□□□□ -0.6
APTX-233	ENST00000496030	KCNK9	Q9NPC2	374 aa		11.29	□□□□□ -0.6
APTX-233	ENST00000496030	IRAK4	Q9NWZ3	460 aa		11.29	□□□□□ -0.6
APTX-233	ENST00000496030	MID2	Q9UJV3	735 aa		11.29	□□□□□ -0.6
APTX-233	ENST00000496030	CROT	Q9UKG9	612 aa		11.29	□□□□□ -0.6
APTX-233	ENST00000496030	SPEN	Q96T58	3664 aa	Known RBP	11.29	□□□□□ -0.6
APTX-233	ENST00000496030		A0A0A6YYC8	382 aa	Predicted RBP	11.28	□□□□□ -0.6
APTX-233	ENST00000496030	TMEM120B	A0PK00	339 aa		11.28	□□□□□ -0.6
APTX-233	ENST00000496030	GOLGA6L10	A6NI86	522 aa		11.28	□□□□□ -0.6
APTX-233	ENST00000496030		I3L1I5	382 aa	Predicted RBP	11.28	□□□□□ -0.6
APTX-233	ENST00000496030	TM9SF1	O15321	606 aa		11.28	□□□□□ -0.6
APTX-233	ENST00000496030	OR4F21	O95013	312 aa		11.28	□□□□□ -0.6
APTX-233	ENST00000496030	OTC	P00480	354 aa		11.28	□□□□□ -0.6
APTX-233	ENST00000496030	SERPIND1	P05546	499 aa		11.28	□□□□□ -0.6
APTX-233	ENST00000496030	KLK3	P07288	261 aa	Predicted RBP	11.28	□□□□□ -0.6
APTX-233	ENST00000496030	SLC35G6	P0C7Q6	338 aa		11.28	□□□□□ -0.6
APTX-233	ENST00000496030	LIF	P15018	202 aa		11.28	□□□□□ -0.6
APTX-233	ENST00000496030	PIK3CB	P42338	1070 aa		11.28	□□□□□ -0.6
APTX-233	ENST00000496030	NEK2	P51955	445 aa		11.28	□□□□□ -0.6
APTX-233	ENST00000496030	DCD	P81605	110 aa	Known RBP	11.28	□□□□□ -0.6
APTX-233	ENST00000496030	HIST2H2AC	Q16777	129 aa	Predicted RBP	11.28	□□□□□ -0.6
APTX-233	ENST00000496030	HIST2H2AA3	Q6FI13	130 aa		11.28	□□□□□ -0.6
APTX-233	ENST00000496030	MRPL14	Q6P1L8	145 aa	Known RBP	11.28	□□□□□ -0.6
APTX-233	ENST00000496030	METTL27	Q8N6F8	245 aa	Predicted RBP	11.28	□□□□□ -0.6
APTX-233	ENST00000496030	TTL	Q8NG68	377 aa		11.28	□□□□□ -0.6
APTX-233	ENST00000496030	OR9A4	Q8NGU2	314 aa		11.28	□□□□□ -0.6
APTX-233	ENST00000496030	HUS1B	Q8NHY5	278 aa		11.28	□□□□□ -0.6
APTX-233	ENST00000496030	PPP4R1	Q8TF05	950 aa		11.28	□□□□□ -0.6
APTX-233	ENST00000496030	AGAP11	Q8TF27	550 aa		11.28	□□□□□ -0.6
APTX-233	ENST00000496030	UBE2E3	Q969T4	207 aa		11.28	□□□□□ -0.6
APTX-233	ENST00000496030	ATP6V1E2	Q96A05	226 aa		11.28	□□□□□ -0.6
APTX-233	ENST00000496030	MS4A6E	Q96DS6	147 aa		11.28	□□□□□ -0.6
APTX-233	ENST00000496030	MVB12A	Q96EY5	273 aa		11.28	□□□□□ -0.6
APTX-233	ENST00000496030	PKNOX2	Q96KN3	472 aa		11.28	□□□□□ -0.6
APTX-233	ENST00000496030	ATP6V1G3	Q96LB4	118 aa		11.28	□□□□□ -0.6
APTX-233	ENST00000496030	QRFPR	Q96P65	431 aa		11.28	□□□□□ -0.6
APTX-233	ENST00000496030	F2RL3	Q96RI0	385 aa		11.28	□□□□□ -0.6
APTX-233	ENST00000496030	MS4A8	Q9BY19	250 aa		11.28	□□□□□ -0.6
APTX-233	ENST00000496030	NLN	Q9BYT8	704 aa		11.28	□□□□□ -0.6
APTX-233	ENST00000496030	DRC3	Q9H069	523 aa		11.28	□□□□□ -0.6
APTX-233	ENST00000496030	TXLNG	Q9NUQ3	528 aa		11.28	□□□□□ -0.6
APTX-233	ENST00000496030	PCDHGA11	Q9Y5H2	935 aa		11.28	□□□□□ -0.6
APTX-233	ENST00000496030	FBN2	P35556	2912 aa		11.28	□□□□□ -0.6
APTX-233	ENST00000496030	CRYBG3	Q68DQ2	2970 aa		11.27	□□□□□ -0.61
APTX-233	ENST00000496030	IGLV3-12	A0A075B6K2	115 aa		11.27	□□□□□ -0.61
APTX-233	ENST00000496030	ANKDD1B	A6NHY2	528 aa		11.27	□□□□□ -0.61
APTX-233	ENST00000496030	MAGEB17	A8MXT2	336 aa		11.27	□□□□□ -0.61
APTX-233	ENST00000496030	FFAR3	O14843	346 aa		11.27	□□□□□ -0.61
APTX-233	ENST00000496030	BIRC5	O15392	142 aa		11.27	□□□□□ -0.61
APTX-233	ENST00000496030	GPR42	O15529	346 aa		11.27	□□□□□ -0.61
APTX-233	ENST00000496030	GALR3	O60755	368 aa	Predicted RBP	11.27	□□□□□ -0.61
APTX-233	ENST00000496030	KLF7	O75840	302 aa	Predicted RBP	11.27	□□□□□ -0.61
APTX-233	ENST00000496030	ZWINT	O95229	277 aa		11.27	□□□□□ -0.61
APTX-233	ENST00000496030	NSA2	O95478	260 aa	Known RBP	11.27	□□□□□ -0.61
APTX-233	ENST00000496030	ETHE1	O95571	254 aa		11.27	□□□□□ -0.61
APTX-233	ENST00000496030	ESRRB	O95718	433 aa		11.27	□□□□□ -0.61
APTX-233	ENST00000496030	MLYCD	O95822	493 aa		11.27	□□□□□ -0.61
APTX-233	ENST00000496030	ZNF888	P0CJ79	500 aa	Predicted RBP	11.27	□□□□□ -0.61
APTX-233	ENST00000496030	ALOX12	P18054	663 aa		11.27	□□□□□ -0.61
APTX-233	ENST00000496030	IL1RN	P18510	177 aa		11.27	□□□□□ -0.61
APTX-233	ENST00000496030	TCN2	P20062	427 aa		11.27	□□□□□ -0.61
APTX-233	ENST00000496030	ATP1A2	P50993	1020 aa		11.27	□□□□□ -0.61
APTX-233	ENST00000496030	FOXA1	P55317	472 aa		11.27	□□□□□ -0.61
APTX-233	ENST00000496030	PKNOX1	P55347	436 aa		11.27	□□□□□ -0.61
APTX-233	ENST00000496030	FOXL2	P58012	376 aa		11.27	□□□□□ -0.61
APTX-233	ENST00000496030	RAB8A	P61006	207 aa		11.27	□□□□□ -0.61
APTX-233	ENST00000496030	NAA20	P61599	178 aa		11.27	□□□□□ -0.61
APTX-233	ENST00000496030	RGS1	Q08116	209 aa		11.27	□□□□□ -0.61
APTX-233	ENST00000496030	DNASE1L3	Q13609	305 aa		11.27	□□□□□ -0.61
APTX-233	ENST00000496030	SLC9A5	Q14940	896 aa		11.27	□□□□□ -0.61
APTX-233	ENST00000496030	RBBP7	Q16576	425 aa		11.27	□□□□□ -0.61
APTX-233	ENST00000496030	TOR1AIP1	Q5JTV8	583 aa		11.27	□□□□□ -0.61
APTX-233	ENST00000496030	TCHHL1	Q5QJ38	904 aa	Predicted RBP	11.27	□□□□□ -0.61
APTX-233	ENST00000496030	FAM69B	Q5VUD6	431 aa		11.27	□□□□□ -0.61
APTX-233	ENST00000496030	FRG2	Q64ET8	278 aa		11.27	□□□□□ -0.61
APTX-233	ENST00000496030	PRMT9	Q6P2P2	845 aa		11.27	□□□□□ -0.61

Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms