RNA–Protein interactions for RNA: ENST00000495497.1

HDAC4-212, Transcript of histone deacetylase 4, humanhuman

TSL 5

Gene HDAC4, Length 849 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-212ENST00000495497 KCNK9Q9NPC2 374 aa18.41■□□□□ 0.54
HDAC4-212ENST00000495497 ZNF282Q9UDV7 671 aaPredicted RBP18.41■□□□□ 0.54
HDAC4-212ENST00000495497 MID2Q9UJV3 735 aa18.41■□□□□ 0.54
HDAC4-212ENST00000495497 PCDHGA11Q9Y5H2 935 aa18.41■□□□□ 0.54
HDAC4-212ENST00000495497 SEC16AO15027 2179 aa18.4■□□□□ 0.54
HDAC4-212ENST00000495497 VSTM2BA6NLU5 285 aa18.4■□□□□ 0.54
HDAC4-212ENST00000495497 MAGEB17A8MXT2 336 aa18.4■□□□□ 0.54
HDAC4-212ENST00000495497 UBFD1O14562 309 aaKnown RBP18.4■□□□□ 0.54
HDAC4-212ENST00000495497 PRPF4O43172 522 aaKnown RBP eCLIP18.4■□□□□ 0.548e-7■■□□□ 12.1
HDAC4-212ENST00000495497 UMODP07911 640 aa18.4■□□□□ 0.54
HDAC4-212ENST00000495497 ZGLP1P0C6A0 271 aa18.4■□□□□ 0.54
HDAC4-212ENST00000495497 FOLR3P41439 243 aa18.4■□□□□ 0.54
HDAC4-212ENST00000495497 RPS13P62277 151 aaKnown RBP18.4■□□□□ 0.54
HDAC4-212ENST00000495497 OCA2Q04671 838 aa18.4■□□□□ 0.54
HDAC4-212ENST00000495497 MPP2Q14168 576 aa18.4■□□□□ 0.54
HDAC4-212ENST00000495497 ADPRMQ3LIE5 342 aa18.4■□□□□ 0.54
HDAC4-212ENST00000495497 SGO1Q5FBB7 561 aa18.4■□□□□ 0.54
HDAC4-212ENST00000495497 LIPMQ5VYY2 423 aa18.4■□□□□ 0.54
HDAC4-212ENST00000495497 TTC19Q6DKK2 380 aaPredicted RBP18.4■□□□□ 0.54
HDAC4-212ENST00000495497 UBE3DQ7Z6J8 389 aa18.4■□□□□ 0.54
HDAC4-212ENST00000495497 LAPTM4BQ86VI4 370 aa18.4■□□□□ 0.54
HDAC4-212ENST00000495497 OR51Q1Q8NH59 317 aa18.4■□□□□ 0.54
HDAC4-212ENST00000495497 GAL3ST3Q96A11 431 aa18.4■□□□□ 0.54
HDAC4-212ENST00000495497 MIEF2Q96C03 454 aa18.4■□□□□ 0.54
HDAC4-212ENST00000495497 GATA5Q9BWX5 397 aaPredicted RBP18.4■□□□□ 0.54
HDAC4-212ENST00000495497 SHCBP1LQ9BZQ2 653 aa18.4■□□□□ 0.54
HDAC4-212ENST00000495497 DMRT3Q9NQL9 472 aa18.4■□□□□ 0.54
HDAC4-212ENST00000495497 PADI2Q9Y2J8 665 aa18.4■□□□□ 0.54
HDAC4-212ENST00000495497 MAP4K5Q9Y4K4 846 aa18.4■□□□□ 0.54
HDAC4-212ENST00000495497 GOLGA6L10A6NI86 522 aa18.39■□□□□ 0.53
HDAC4-212ENST00000495497 RTCAO00442 366 aaKnown RBP18.39■□□□□ 0.53
HDAC4-212ENST00000495497 JRKO75564 520 aa18.39■□□□□ 0.53
HDAC4-212ENST00000495497 OTX2P32243 289 aa18.39■□□□□ 0.53
HDAC4-212ENST00000495497 ETV4P43268 484 aa18.39■□□□□ 0.53
HDAC4-212ENST00000495497 MC1RQ01726 317 aa18.39■□□□□ 0.53
HDAC4-212ENST00000495497 KLC1Q07866 573 aa18.39■□□□□ 0.53
HDAC4-212ENST00000495497 LCP2Q13094 533 aa18.39■□□□□ 0.53
HDAC4-212ENST00000495497 UGT8Q16880 541 aa18.39■□□□□ 0.53
HDAC4-212ENST00000495497 DEFB109BQ30KR1 87 aa18.39■□□□□ 0.53
HDAC4-212ENST00000495497 GGTA1PQ4G0N0 100 aa18.39■□□□□ 0.53
HDAC4-212ENST00000495497 CFAP157Q5JU67 520 aa18.39■□□□□ 0.53
HDAC4-212ENST00000495497 TCHHL1Q5QJ38 904 aaPredicted RBP18.39■□□□□ 0.53
HDAC4-212ENST00000495497 ABHD17CQ6PCB6 329 aa18.39■□□□□ 0.53
HDAC4-212ENST00000495497 GPRIN3Q6ZVF9 776 aa18.39■□□□□ 0.53
HDAC4-212ENST00000495497 HDXQ7Z353 690 aa18.39■□□□□ 0.53
HDAC4-212ENST00000495497 GPR155Q7Z3F1 870 aa18.39■□□□□ 0.53
HDAC4-212ENST00000495497 ZC3H7AQ8IWR0 971 aaKnown RBP18.39■□□□□ 0.53
HDAC4-212ENST00000495497 CDYL2Q8N8U2 506 aa18.39■□□□□ 0.53
HDAC4-212ENST00000495497 OR2L5Q8NG80 312 aa18.39■□□□□ 0.53
HDAC4-212ENST00000495497 OR2Y1Q8NGV0 311 aa18.39■□□□□ 0.53
HDAC4-212ENST00000495497 SNRNP27Q8WVK2 155 aaKnown RBP18.39■□□□□ 0.53
HDAC4-212ENST00000495497 ARL8AQ96BM9 186 aa18.39■□□□□ 0.53
HDAC4-212ENST00000495497 REPS1Q96D71 796 aa18.39■□□□□ 0.53
HDAC4-212ENST00000495497 CMTM7Q96FZ5 175 aa18.39■□□□□ 0.53
HDAC4-212ENST00000495497 FAR2Q96K12 515 aa18.39■□□□□ 0.53
HDAC4-212ENST00000495497 KCNA7Q96RP8 456 aa18.39■□□□□ 0.53
HDAC4-212ENST00000495497 ZNF382Q96SR6 550 aa18.39■□□□□ 0.53
HDAC4-212ENST00000495497 RBCK1Q9BYM8 510 aa18.39■□□□□ 0.53
HDAC4-212ENST00000495497 WDR54Q9H977 334 aa18.39■□□□□ 0.53
HDAC4-212ENST00000495497 SSU72Q9NP77 194 aaKnown RBP18.39■□□□□ 0.53
HDAC4-212ENST00000495497 MID1IP1Q9NPA3 183 aa18.39■□□□□ 0.53
HDAC4-212ENST00000495497 FARSBQ9NSD9 589 aaKnown RBP18.39■□□□□ 0.53
HDAC4-212ENST00000495497 TRPS1Q9UHF7 1281 aa18.39■□□□□ 0.53
HDAC4-212ENST00000495497 TSC22D4Q9Y3Q8 395 aa18.39■□□□□ 0.53
HDAC4-212ENST00000495497 ACTL7BQ9Y614 415 aa18.39■□□□□ 0.53
HDAC4-212ENST00000495497 IGLV3-12A0A075B6K2 115 aa18.38■□□□□ 0.53
HDAC4-212ENST00000495497 OR2W5A6NFC9 320 aa18.38■□□□□ 0.53
HDAC4-212ENST00000495497 CHST10O43529 356 aa18.38■□□□□ 0.53
HDAC4-212ENST00000495497 TRIM13O60858 407 aa18.38■□□□□ 0.53
HDAC4-212ENST00000495497 ETHE1O95571 254 aa18.38■□□□□ 0.53
HDAC4-212ENST00000495497 MLYCDO95822 493 aa18.38■□□□□ 0.53
HDAC4-212ENST00000495497 CD63P08962 238 aa18.38■□□□□ 0.53
HDAC4-212ENST00000495497 SERPINB1P30740 379 aa18.38■□□□□ 0.53
HDAC4-212ENST00000495497 PIK3CBP42338 1070 aa18.38■□□□□ 0.53
HDAC4-212ENST00000495497 XCR1P46094 333 aa18.38■□□□□ 0.53
HDAC4-212ENST00000495497 MAGOHP61326 146 aaKnown RBP18.38■□□□□ 0.53
HDAC4-212ENST00000495497 FRG2Q64ET8 278 aa18.38■□□□□ 0.53
HDAC4-212ENST00000495497 TRIM40Q6P9F5 258 aa18.38■□□□□ 0.53
HDAC4-212ENST00000495497 ZCCHC23Q6ZST2 131 aa18.38■□□□□ 0.53
HDAC4-212ENST00000495497 FRMD7Q6ZUT3 714 aa18.38■□□□□ 0.53
HDAC4-212ENST00000495497 ADAMTS17Q8TE56 1095 aa18.38■□□□□ 0.53
HDAC4-212ENST00000495497 AGAP11Q8TF27 550 aa18.38■□□□□ 0.53
HDAC4-212ENST00000495497 PEX11GQ96HA9 241 aa18.38■□□□□ 0.53
HDAC4-212ENST00000495497 PKNOX2Q96KN3 472 aa18.38■□□□□ 0.53
HDAC4-212ENST00000495497 QRFPRQ96P65 431 aa18.38■□□□□ 0.53
HDAC4-212ENST00000495497 FRG2BQ96QU4 278 aa18.38■□□□□ 0.53
HDAC4-212ENST00000495497 MESP1Q9BRJ9 268 aa18.38■□□□□ 0.53
HDAC4-212ENST00000495497 SORBS1Q9BX66 1292 aaKnown RBP18.38■□□□□ 0.53
HDAC4-212ENST00000495497 FAM117AQ9C073 453 aa18.38■□□□□ 0.53
HDAC4-212ENST00000495497 MKKSQ9NPJ1 570 aaPredicted RBP18.38■□□□□ 0.53
HDAC4-212ENST00000495497 ADGRE2Q9UHX3 823 aa18.38■□□□□ 0.53
HDAC4-212ENST00000495497 SCN3AQ9NY46 2000 aa18.38■□□□□ 0.53
HDAC4-212ENST00000495497 DSPP15924 2871 aaKnown RBP18.38■□□□□ 0.53
HDAC4-212ENST00000495497 PKD1L2Q7Z442 2459 aa18.38■□□□□ 0.53
HDAC4-212ENST00000495497 EPG5Q9HCE0 2579 aa18.37■□□□□ 0.53
HDAC4-212ENST00000495497 WDR91A4D1P6 747 aa18.37■□□□□ 0.53
HDAC4-212ENST00000495497 PDYNP01213 254 aa18.37■□□□□ 0.53
HDAC4-212ENST00000495497 BPGMP07738 259 aa18.37■□□□□ 0.53
HDAC4-212ENST00000495497 EFNA3P52797 238 aa18.37■□□□□ 0.53
HDAC4-212ENST00000495497 FOXA1P55317 472 aa18.37■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms