RNA–Protein interactions for RNA: ENST00000494938.2

SCAP-213, Transcript of SREBF chaperone, humanhuman

TSL 4

Gene SCAP, Length 579 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAP-213ENST00000494938 E2F3O00716 465 aa13.55□□□□□ -0.24
SCAP-213ENST00000494938 PCDH17O14917 1159 aa13.55□□□□□ -0.24
SCAP-213ENST00000494938 SLU7O95391 586 aaKnown RBP13.55□□□□□ -0.24
SCAP-213ENST00000494938 STXBP1P61764 594 aaKnown RBP13.55□□□□□ -0.24
SCAP-213ENST00000494938 KLRB1Q12918 225 aa13.55□□□□□ -0.24
SCAP-213ENST00000494938 PCOLCEQ15113 449 aa13.55□□□□□ -0.24
SCAP-213ENST00000494938 HIST2H2ACQ16777 129 aaPredicted RBP13.55□□□□□ -0.24
SCAP-213ENST00000494938 PAGE2BQ5JRK9 111 aa13.55□□□□□ -0.24
SCAP-213ENST00000494938 VWA5B1Q5TIE3 1220 aa13.55□□□□□ -0.24
SCAP-213ENST00000494938 HIST2H2AA3Q6FI13 130 aa13.55□□□□□ -0.24
SCAP-213ENST00000494938 NIPAL1Q6NVV3 410 aa13.55□□□□□ -0.24
SCAP-213ENST00000494938 METTL2BQ6P1Q9 378 aaKnown RBP13.55□□□□□ -0.24
SCAP-213ENST00000494938 GOLGA7Q7Z5G4 137 aa13.55□□□□□ -0.24
SCAP-213ENST00000494938 CYP4X1Q8N118 509 aa13.55□□□□□ -0.24
SCAP-213ENST00000494938 PTGR2Q8N8N7 351 aaPredicted RBP13.55□□□□□ -0.24
SCAP-213ENST00000494938 TEX19Q8NA77 164 aa13.55□□□□□ -0.24
SCAP-213ENST00000494938 OR7G3Q8NG95 312 aa13.55□□□□□ -0.24
SCAP-213ENST00000494938 ZNF473Q8WTR7 871 aaKnown RBP13.55□□□□□ -0.24
SCAP-213ENST00000494938 CCT6BQ92526 530 aa13.55□□□□□ -0.24
SCAP-213ENST00000494938 TBC1D20Q96BZ9 403 aa13.55□□□□□ -0.24
SCAP-213ENST00000494938 IMMP1LQ96LU5 166 aa13.55□□□□□ -0.24
SCAP-213ENST00000494938 OR1F2PQ96R84 312 aa13.55□□□□□ -0.24
SCAP-213ENST00000494938 F2RL3Q96RI0 385 aa13.55□□□□□ -0.24
SCAP-213ENST00000494938 CCDC77Q9BR77 488 aa13.55□□□□□ -0.24
SCAP-213ENST00000494938 MRPL46Q9H2W6 279 aaKnown RBP13.55□□□□□ -0.24
SCAP-213ENST00000494938 ZBTB20Q9HC78 741 aaPredicted RBP13.55□□□□□ -0.24
SCAP-213ENST00000494938 ZNF160Q9HCG1 818 aa13.55□□□□□ -0.24
SCAP-213ENST00000494938 PRDM7Q9NQW5 492 aa13.55□□□□□ -0.24
SCAP-213ENST00000494938 TMEM216Q9P0N5 145 aa13.55□□□□□ -0.24
SCAP-213ENST00000494938 C5AR2Q9P296 337 aa13.55□□□□□ -0.24
SCAP-213ENST00000494938 PSMC3IPQ9P2W1 217 aaPredicted RBP13.55□□□□□ -0.24
SCAP-213ENST00000494938 HEMK1Q9Y5R4 338 aaPredicted RBP13.55□□□□□ -0.24
SCAP-213ENST00000494938 A0A0G2JN53 185 aa13.54□□□□□ -0.24
SCAP-213ENST00000494938 A0A1W2PPM1 405 aa13.54□□□□□ -0.24
SCAP-213ENST00000494938 STX16-NPEPL1H3BU86 382 aa13.54□□□□□ -0.24
SCAP-213ENST00000494938 OR7A17O14581 309 aa13.54□□□□□ -0.24
SCAP-213ENST00000494938 STX16O14662 325 aa13.54□□□□□ -0.24
SCAP-213ENST00000494938 SLC28A2O43868 658 aa13.54□□□□□ -0.24
SCAP-213ENST00000494938 FHP07954 510 aa13.54□□□□□ -0.24
SCAP-213ENST00000494938 CYC1P08574 325 aa13.54□□□□□ -0.24
SCAP-213ENST00000494938 C8orf89P0DMQ9 161 aa13.54□□□□□ -0.24
SCAP-213ENST00000494938 EEF1DP29692 281 aaKnown RBP13.54□□□□□ -0.24
SCAP-213ENST00000494938 CASRP41180 1078 aa13.54□□□□□ -0.24
SCAP-213ENST00000494938 PLA2G16P53816 162 aa13.54□□□□□ -0.24
SCAP-213ENST00000494938 EEF1A2Q05639 463 aaKnown RBP13.54□□□□□ -0.24
SCAP-213ENST00000494938 GTF2H2Q13888 395 aa13.54□□□□□ -0.24
SCAP-213ENST00000494938 MINDY4Q4G0A6 757 aa13.54□□□□□ -0.24
SCAP-213ENST00000494938 NADK2Q4G0N4 442 aa13.54□□□□□ -0.24
SCAP-213ENST00000494938 LIPJQ5W064 366 aa13.54□□□□□ -0.24
SCAP-213ENST00000494938 GRHL2Q6ISB3 625 aa13.54□□□□□ -0.24
SCAP-213ENST00000494938 GTF2H2CQ6P1K8 395 aa13.54□□□□□ -0.24
SCAP-213ENST00000494938 MED27Q6P2C8 311 aa13.54□□□□□ -0.24
SCAP-213ENST00000494938 ABHD17CQ6PCB6 329 aa13.54□□□□□ -0.24
SCAP-213ENST00000494938 ATG14Q6ZNE5 492 aa13.54□□□□□ -0.24
SCAP-213ENST00000494938 LANCL3Q6ZV70 420 aa13.54□□□□□ -0.24
SCAP-213ENST00000494938 PRICKLE2Q7Z3G6 844 aa13.54□□□□□ -0.24
SCAP-213ENST00000494938 ANKRD37Q7Z713 158 aa13.54□□□□□ -0.24
SCAP-213ENST00000494938 TDRPQ86YL5 185 aa13.54□□□□□ -0.24
SCAP-213ENST00000494938 CA13Q8N1Q1 262 aa13.54□□□□□ -0.24
SCAP-213ENST00000494938 RBMXL3Q8N7X1 1067 aaKnown RBP13.54□□□□□ -0.24
SCAP-213ENST00000494938 L3MBTL4Q8NA19 623 aa13.54□□□□□ -0.24
SCAP-213ENST00000494938 OR2L5Q8NG80 312 aa13.54□□□□□ -0.24
SCAP-213ENST00000494938 ACMSDQ8TDX5 336 aa13.54□□□□□ -0.24
SCAP-213ENST00000494938 UBLCP1Q8WVY7 318 aaPredicted RBP13.54□□□□□ -0.24
SCAP-213ENST00000494938 PSMF1Q92530 271 aa13.54□□□□□ -0.24
SCAP-213ENST00000494938 GAL3ST3Q96A11 431 aa13.54□□□□□ -0.24
SCAP-213ENST00000494938 VPS50Q96JG6 964 aa13.54□□□□□ -0.24
SCAP-213ENST00000494938 WDR77Q9BQA1 342 aaPredicted RBP13.54□□□□□ -0.24
SCAP-213ENST00000494938 RBCK1Q9BYM8 510 aa13.54□□□□□ -0.24
SCAP-213ENST00000494938 REXO4Q9GZR2 422 aaKnown RBP13.54□□□□□ -0.24
SCAP-213ENST00000494938 LHPPQ9H008 270 aa13.54□□□□□ -0.24
SCAP-213ENST00000494938 IPPKQ9H8X2 491 aa13.54□□□□□ -0.24
SCAP-213ENST00000494938 TBK1Q9UHD2 729 aa13.54□□□□□ -0.24
SCAP-213ENST00000494938 ANAPC2Q9UJX6 822 aa13.54□□□□□ -0.24
SCAP-213ENST00000494938 TMCO1Q9UM00 188 aa13.54□□□□□ -0.24
SCAP-213ENST00000494938 ANGPTL3Q9Y5C1 460 aa13.54□□□□□ -0.24
SCAP-213ENST00000494938 ANKRD12Q6UB98 2062 aa13.54□□□□□ -0.24
SCAP-213ENST00000494938 MED13Q9UHV7 2174 aa13.54□□□□□ -0.24
SCAP-213ENST00000494938 NSG1A0A0A6YYJ2 146 aa13.53□□□□□ -0.24
SCAP-213ENST00000494938 IGHV3-20A0A0C4DH32 117 aa13.53□□□□□ -0.24
SCAP-213ENST00000494938 GOLGA8RI6L899 631 aa13.53□□□□□ -0.24
SCAP-213ENST00000494938 ERI3O43414 337 aaKnown RBP13.53□□□□□ -0.24
SCAP-213ENST00000494938 B4GALT2O60909 372 aa13.53□□□□□ -0.24
SCAP-213ENST00000494938 SMIM24O75264 130 aa13.53□□□□□ -0.24
SCAP-213ENST00000494938 CDC123O75794 336 aaPredicted RBP13.53□□□□□ -0.24
SCAP-213ENST00000494938 CELA2AP08217 269 aa13.53□□□□□ -0.24
SCAP-213ENST00000494938 PRR35P0CG20 571 aa13.53□□□□□ -0.24
SCAP-213ENST00000494938 PYGBP11216 843 aa13.53□□□□□ -0.24
SCAP-213ENST00000494938 ITGA3P26006 1051 aa13.53□□□□□ -0.24
SCAP-213ENST00000494938 HSD17B3P37058 310 aa13.53□□□□□ -0.24
SCAP-213ENST00000494938 SKP1P63208 163 aa13.53□□□□□ -0.24
SCAP-213ENST00000494938 BTG2P78543 158 aa13.53□□□□□ -0.24
SCAP-213ENST00000494938 MFSD4BQ5TF39 518 aa13.53□□□□□ -0.24
SCAP-213ENST00000494938 IGFL2Q6UWQ7 119 aa13.53□□□□□ -0.24
SCAP-213ENST00000494938 IGFL3Q6UXB1 125 aa13.53□□□□□ -0.24
SCAP-213ENST00000494938 CPEB2Q7Z5Q1 589 aaKnown RBP13.53□□□□□ -0.24
SCAP-213ENST00000494938 RNF175Q8N4F7 328 aa13.53□□□□□ -0.24
SCAP-213ENST00000494938 METTL21AQ8WXB1 218 aa13.53□□□□□ -0.24
SCAP-213ENST00000494938 UBE2E3Q969T4 207 aa13.53□□□□□ -0.24
SCAP-213ENST00000494938 THOC3Q96J01 351 aaKnown RBP13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms