RNA–Protein interactions for RNA: ENST00000494646.1

MSH5-218, Transcript of mutS homolog 5, humanhuman

TSL 4

Gene MSH5, Length 528 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-218ENST00000494646 POU4F1Q01851 419 aa9.02□□□□□ -0.97
MSH5-218ENST00000494646 MEP1AQ16819 746 aa9.02□□□□□ -0.97
MSH5-218ENST00000494646 ACER2Q5QJU3 275 aa9.02□□□□□ -0.97
MSH5-218ENST00000494646 PLAG1Q6DJT9 500 aa9.02□□□□□ -0.97
MSH5-218ENST00000494646 SPINK14Q6IE38 97 aa9.02□□□□□ -0.97
MSH5-218ENST00000494646 H3F3CQ6NXT2 135 aa9.02□□□□□ -0.97
MSH5-218ENST00000494646 SYT10Q6XYQ8 523 aa9.02□□□□□ -0.97
MSH5-218ENST00000494646 ABHD13Q7L211 337 aa9.02□□□□□ -0.97
MSH5-218ENST00000494646 FJX1Q86VR8 437 aa9.02□□□□□ -0.97
MSH5-218ENST00000494646 CTAGE3PQ8IX95 158 aa9.02□□□□□ -0.97
MSH5-218ENST00000494646 BEST3Q8N1M1 668 aa9.02□□□□□ -0.97
MSH5-218ENST00000494646 KIF2BQ8N4N8 673 aa9.02□□□□□ -0.97
MSH5-218ENST00000494646 TRPV3Q8NET8 790 aa9.02□□□□□ -0.97
MSH5-218ENST00000494646 CREB3L4Q8TEY5 395 aa9.02□□□□□ -0.97
MSH5-218ENST00000494646 CCT6BQ92526 530 aa9.02□□□□□ -0.97
MSH5-218ENST00000494646 ANKRD7Q92527 254 aa9.02□□□□□ -0.97
MSH5-218ENST00000494646 CDKL2Q92772 493 aa9.02□□□□□ -0.97
MSH5-218ENST00000494646 MRRFQ96E11 262 aaKnown RBP9.02□□□□□ -0.97
MSH5-218ENST00000494646 SMIM10Q96HG1 83 aa9.02□□□□□ -0.97
MSH5-218ENST00000494646 SIGLEC12Q96PQ1 595 aa9.02□□□□□ -0.97
MSH5-218ENST00000494646 LPAR4Q99677 370 aa9.02□□□□□ -0.97
MSH5-218ENST00000494646 NPAS2Q99743 824 aa9.02□□□□□ -0.97
MSH5-218ENST00000494646 MCMBPQ9BTE3 642 aa9.02□□□□□ -0.97
MSH5-218ENST00000494646 HES7Q9BYE0 225 aa9.02□□□□□ -0.97
MSH5-218ENST00000494646 KLHL1Q9NR64 748 aa9.02□□□□□ -0.97
MSH5-218ENST00000494646 GRHL1Q9NZI5 618 aa9.02□□□□□ -0.97
MSH5-218ENST00000494646 TXNDC16Q9P2K2 825 aa9.02□□□□□ -0.97
MSH5-218ENST00000494646 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP9.02□□□□□ -0.97
MSH5-218ENST00000494646 MYOCOSA0A1B0GUC4 107 aa9.01□□□□□ -0.97
MSH5-218ENST00000494646 TCRBV9S1A1TA0A576 114 aa9.01□□□□□ -0.97
MSH5-218ENST00000494646 URADA6NGE7 173 aa9.01□□□□□ -0.97
MSH5-218ENST00000494646 MAGEB17A8MXT2 336 aa9.01□□□□□ -0.97
MSH5-218ENST00000494646 PSMD12O00232 456 aaPredicted RBP9.01□□□□□ -0.97
MSH5-218ENST00000494646 NDC80O14777 642 aa9.01□□□□□ -0.97
MSH5-218ENST00000494646 CLGNO14967 610 aa9.01□□□□□ -0.97
MSH5-218ENST00000494646 EIF3HO15372 352 aaKnown RBP eCLIP9.01□□□□□ -0.97
MSH5-218ENST00000494646 SERPINA6P08185 405 aa9.01□□□□□ -0.97
MSH5-218ENST00000494646 CD1DP15813 335 aa9.01□□□□□ -0.97
MSH5-218ENST00000494646 STMN1P16949 149 aa9.01□□□□□ -0.97
MSH5-218ENST00000494646 GNAZP19086 355 aa9.01□□□□□ -0.97
MSH5-218ENST00000494646 MAOAP21397 527 aa9.01□□□□□ -0.97
MSH5-218ENST00000494646 MST1P26927 711 aa9.01□□□□□ -0.97
MSH5-218ENST00000494646 MAGEA4P43358 317 aa9.01□□□□□ -0.97
MSH5-218ENST00000494646 SLC6A12P48065 614 aa9.01□□□□□ -0.97
MSH5-218ENST00000494646 KCNC1P48547 511 aa9.01□□□□□ -0.97
MSH5-218ENST00000494646 HSPA7P48741 367 aa9.01□□□□□ -0.97
MSH5-218ENST00000494646 HNMTP50135 292 aa9.01□□□□□ -0.97
MSH5-218ENST00000494646 SLC26A5P58743 744 aa9.01□□□□□ -0.97
MSH5-218ENST00000494646 CDKL1Q00532 357 aa9.01□□□□□ -0.97
MSH5-218ENST00000494646 OC90Q02509 493 aaPredicted RBP9.01□□□□□ -0.97
MSH5-218ENST00000494646 CBLBQ13191 982 aa9.01□□□□□ -0.97
MSH5-218ENST00000494646 TUBA3CQ13748 450 aa9.01□□□□□ -0.97
MSH5-218ENST00000494646 RUNX2Q13950 521 aa9.01□□□□□ -0.97
MSH5-218ENST00000494646 SLBPQ14493 270 aaKnown RBP eCLIP9.01□□□□□ -0.97
MSH5-218ENST00000494646 TGFBIQ15582 683 aa9.01□□□□□ -0.97
MSH5-218ENST00000494646 OR4D1Q15615 310 aa9.01□□□□□ -0.97
MSH5-218ENST00000494646 EXT1Q16394 746 aa9.01□□□□□ -0.97
MSH5-218ENST00000494646 ZNF766Q5HY98 468 aa9.01□□□□□ -0.97
MSH5-218ENST00000494646 C1QL3Q5VWW1 255 aa9.01□□□□□ -0.97
MSH5-218ENST00000494646 ZNF324BQ6AW86 544 aaPredicted RBP9.01□□□□□ -0.97
MSH5-218ENST00000494646 ZNF787Q6DD87 383 aa9.01□□□□□ -0.97
MSH5-218ENST00000494646 TUBA3EQ6PEY2 450 aa9.01□□□□□ -0.97
MSH5-218ENST00000494646 GFRALQ6UXV0 394 aa9.01□□□□□ -0.97
MSH5-218ENST00000494646 SLCO4C1Q6ZQN7 724 aa9.01□□□□□ -0.97
MSH5-218ENST00000494646 MAMDC2Q7Z304 686 aaPredicted RBP9.01□□□□□ -0.97
MSH5-218ENST00000494646 ADAMTSL2Q86TH1 951 aa9.01□□□□□ -0.97
MSH5-218ENST00000494646 GPSM1Q86YR5 675 aa9.01□□□□□ -0.97
MSH5-218ENST00000494646 CA13Q8N1Q1 262 aa9.01□□□□□ -0.97
MSH5-218ENST00000494646 PPM1NQ8N819 430 aa9.01□□□□□ -0.97
MSH5-218ENST00000494646 NR4A3Q92570 626 aa9.01□□□□□ -0.97
MSH5-218ENST00000494646 EXT2Q93063 718 aa9.01□□□□□ -0.97
MSH5-218ENST00000494646 TSPAN17Q96FV3 270 aa9.01□□□□□ -0.97
MSH5-218ENST00000494646 FAR2Q96K12 515 aa9.01□□□□□ -0.97
MSH5-218ENST00000494646 OR1F2PQ96R84 312 aa9.01□□□□□ -0.97
MSH5-218ENST00000494646 RBBP8Q99708 897 aa9.01□□□□□ -0.97
MSH5-218ENST00000494646 CPNE1Q99829 537 aa9.01□□□□□ -0.97
MSH5-218ENST00000494646 SLX1AQ9BQ83 275 aa9.01□□□□□ -0.97
MSH5-218ENST00000494646 UTP23Q9BRU9 249 aaKnown RBP9.01□□□□□ -0.97
MSH5-218ENST00000494646 SLC6A16Q9GZN6 736 aa9.01□□□□□ -0.97
MSH5-218ENST00000494646 DERL2Q9GZP9 239 aa9.01□□□□□ -0.97
MSH5-218ENST00000494646 POPDC3Q9HBV1 291 aa9.01□□□□□ -0.97
MSH5-218ENST00000494646 MMP25Q9NPA2 562 aa9.01□□□□□ -0.97
MSH5-218ENST00000494646 NECTIN3Q9NQS3 549 aa9.01□□□□□ -0.97
MSH5-218ENST00000494646 WWOXQ9NZC7 414 aa9.01□□□□□ -0.97
MSH5-218ENST00000494646 ZNF490Q9ULM2 529 aaPredicted RBP9.01□□□□□ -0.97
MSH5-218ENST00000494646 UTP11Q9Y3A2 253 aaKnown RBP9.01□□□□□ -0.97
MSH5-218ENST00000494646 DOPEY1Q5JWR5 2465 aa9□□□□□ -0.97
MSH5-218ENST00000494646 ANKDD1BA6NHY2 528 aa9□□□□□ -0.97
MSH5-218ENST00000494646 FAM159BA6NKW6 160 aa9□□□□□ -0.97
MSH5-218ENST00000494646 ZNHIT1O43257 154 aa9□□□□□ -0.97
MSH5-218ENST00000494646 PRAMEF4O60810 478 aa9□□□□□ -0.97
MSH5-218ENST00000494646 ZG16O60844 167 aa9□□□□□ -0.97
MSH5-218ENST00000494646 UNC5CO95185 931 aa9□□□□□ -0.97
MSH5-218ENST00000494646 WISP3O95389 354 aaPredicted RBP9□□□□□ -0.97
MSH5-218ENST00000494646 C1QAP02745 245 aa9□□□□□ -0.97
MSH5-218ENST00000494646 CYC1P08574 325 aa9□□□□□ -0.97
MSH5-218ENST00000494646 MYBL2P10244 700 aa9□□□□□ -0.97
MSH5-218ENST00000494646 JAK1P23458 1154 aa9□□□□□ -0.97
MSH5-218ENST00000494646 HNRNPH1P31943 449 aaKnown RBP9□□□□□ -0.97
MSH5-218ENST00000494646 SPRP35270 261 aaPredicted RBP9□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 68.8 ms