RNA–Protein interactions for RNA: ENST00000494503.1

UBR4-216, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 3

Gene UBR4, Length 598 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-216ENST00000494503 NIPAL1Q6NVV3 410 aa9.02□□□□□ -0.97
UBR4-216ENST00000494503 PAQR3Q6TCH7 311 aa9.02□□□□□ -0.97
UBR4-216ENST00000494503 TMPRSS11BQ86T26 416 aa9.02□□□□□ -0.97
UBR4-216ENST00000494503 SIAH3Q8IW03 269 aa9.02□□□□□ -0.97
UBR4-216ENST00000494503 LMNTD2Q8IXW0 634 aa9.02□□□□□ -0.97
UBR4-216ENST00000494503 LGI4Q8N135 537 aa9.02□□□□□ -0.97
UBR4-216ENST00000494503 PLPP5Q8NEB5 264 aa9.02□□□□□ -0.97
UBR4-216ENST00000494503 TRIM58Q8NG06 486 aa9.02□□□□□ -0.97
UBR4-216ENST00000494503 TM4SF19Q96DZ7 209 aa9.02□□□□□ -0.97
UBR4-216ENST00000494503 SNF8Q96H20 258 aa9.02□□□□□ -0.97
UBR4-216ENST00000494503 FAR2Q96K12 515 aa9.02□□□□□ -0.97
UBR4-216ENST00000494503 VKORC1Q9BQB6 163 aa9.02□□□□□ -0.97
UBR4-216ENST00000494503 CCDC77Q9BR77 488 aa9.02□□□□□ -0.97
UBR4-216ENST00000494503 MCCC2Q9HCC0 563 aa9.02□□□□□ -0.97
UBR4-216ENST00000494503 AKAP6Q13023 2319 aa9.02□□□□□ -0.97
UBR4-216ENST00000494503 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP9.01□□□□□ -0.97
UBR4-216ENST00000494503 A0A0G2JN53 185 aa9.01□□□□□ -0.97
UBR4-216ENST00000494503 TRBC2A0A5B9 178 aa9.01□□□□□ -0.97
UBR4-216ENST00000494503 FAM166BA8MTA8 275 aa9.01□□□□□ -0.97
UBR4-216ENST00000494503 SLC16A5O15375 505 aa9.01□□□□□ -0.97
UBR4-216ENST00000494503 PEX1O43933 1283 aa9.01□□□□□ -0.97
UBR4-216ENST00000494503 NADKO95544 446 aaPredicted RBP9.01□□□□□ -0.97
UBR4-216ENST00000494503 NPPBP16860 134 aa9.01□□□□□ -0.97
UBR4-216ENST00000494503 PGAM1P18669 254 aa9.01□□□□□ -0.97
UBR4-216ENST00000494503 CDC25BP30305 580 aa9.01□□□□□ -0.97
UBR4-216ENST00000494503 HLCSP50747 726 aa9.01□□□□□ -0.97
UBR4-216ENST00000494503 CLCN2P51788 898 aa9.01□□□□□ -0.97
UBR4-216ENST00000494503 CDKN2DP55273 166 aa9.01□□□□□ -0.97
UBR4-216ENST00000494503 MLF1P58340 268 aa9.01□□□□□ -0.97
UBR4-216ENST00000494503 IL2P60568 153 aa9.01□□□□□ -0.97
UBR4-216ENST00000494503 SLC13A2Q13183 592 aa9.01□□□□□ -0.97
UBR4-216ENST00000494503 PWP1Q13610 501 aa9.01□□□□□ -0.97
UBR4-216ENST00000494503 CRYMQ14894 314 aa9.01□□□□□ -0.97
UBR4-216ENST00000494503 PPP1R7Q15435 360 aa9.01□□□□□ -0.97
UBR4-216ENST00000494503 TOR1AIP1Q5JTV8 583 aa9.01□□□□□ -0.97
UBR4-216ENST00000494503 RBM20Q5T481 1227 aaKnown RBP9.01□□□□□ -0.97
UBR4-216ENST00000494503 HECTD2Q5U5R9 776 aa9.01□□□□□ -0.97
UBR4-216ENST00000494503 ARMC3Q5W041 872 aa9.01□□□□□ -0.97
UBR4-216ENST00000494503 DUPD1Q68J44 220 aa9.01□□□□□ -0.97
UBR4-216ENST00000494503 TTC27Q6P3X3 843 aa9.01□□□□□ -0.97
UBR4-216ENST00000494503 CCDC137Q6PK04 289 aaKnown RBP9.01□□□□□ -0.97
UBR4-216ENST00000494503 PCGF5Q86SE9 256 aa9.01□□□□□ -0.97
UBR4-216ENST00000494503 SULF2Q8IWU5 870 aa9.01□□□□□ -0.97
UBR4-216ENST00000494503 OR5M3Q8NGP4 307 aa9.01□□□□□ -0.97
UBR4-216ENST00000494503 OR10Q1Q8NGQ4 319 aa9.01□□□□□ -0.97
UBR4-216ENST00000494503 FAM57AQ8TBR7 257 aa9.01□□□□□ -0.97
UBR4-216ENST00000494503 ELP5Q8TE02 316 aa9.01□□□□□ -0.97
UBR4-216ENST00000494503 PHF10Q8WUB8 498 aaKnown RBP9.01□□□□□ -0.97
UBR4-216ENST00000494503 SLC5A11Q8WWX8 675 aa9.01□□□□□ -0.97
UBR4-216ENST00000494503 ATL1Q8WXF7 558 aa9.01□□□□□ -0.97
UBR4-216ENST00000494503 NEIL2Q969S2 332 aa9.01□□□□□ -0.97
UBR4-216ENST00000494503 C14orf79Q96F83 325 aa9.01□□□□□ -0.97
UBR4-216ENST00000494503 MS4A14Q96JA4 679 aa9.01□□□□□ -0.97
UBR4-216ENST00000494503 OLFM1Q99784 485 aa9.01□□□□□ -0.97
UBR4-216ENST00000494503 EGFL8Q99944 293 aa9.01□□□□□ -0.97
UBR4-216ENST00000494503 SPOCK3Q9BQ16 436 aa9.01□□□□□ -0.97
UBR4-216ENST00000494503 AIF1LQ9BQI0 150 aa9.01□□□□□ -0.97
UBR4-216ENST00000494503 SGPP1Q9BX95 441 aa9.01□□□□□ -0.97
UBR4-216ENST00000494503 DEFB127Q9H1M4 99 aa9.01□□□□□ -0.97
UBR4-216ENST00000494503 PRDM9Q9NQV7 894 aa9.01□□□□□ -0.97
UBR4-216ENST00000494503 SLC17A6Q9P2U8 582 aa9.01□□□□□ -0.97
UBR4-216ENST00000494503 ASB1Q9Y576 335 aa9.01□□□□□ -0.97
UBR4-216ENST00000494503 EML6Q6ZMW3 1958 aa9.01□□□□□ -0.97
UBR4-216ENST00000494503 HCFC1P51610 2035 aa9□□□□□ -0.97
UBR4-216ENST00000494503 A8MVJ9 347 aa9□□□□□ -0.97
UBR4-216ENST00000494503 G3V3Y1 287 aa9□□□□□ -0.97
UBR4-216ENST00000494503 ACOT7O00154 380 aa9□□□□□ -0.97
UBR4-216ENST00000494503 BANF1O75531 89 aa9□□□□□ -0.97
UBR4-216ENST00000494503 ITGA10O75578 1167 aa9□□□□□ -0.97
UBR4-216ENST00000494503 KRT38O76015 456 aa9□□□□□ -0.97
UBR4-216ENST00000494503 ZWINTO95229 277 aa9□□□□□ -0.97
UBR4-216ENST00000494503 IFNA16P05015 189 aa9□□□□□ -0.97
UBR4-216ENST00000494503 MAGEA6P43360 314 aa9□□□□□ -0.97
UBR4-216ENST00000494503 PGGT1BP53609 377 aa9□□□□□ -0.97
UBR4-216ENST00000494503 BTN3A2P78410 334 aa9□□□□□ -0.97
UBR4-216ENST00000494503 BBS9Q3SYG4 887 aa9□□□□□ -0.97
UBR4-216ENST00000494503 HP1BP3Q5SSJ5 553 aaPredicted RBP9□□□□□ -0.97
UBR4-216ENST00000494503 TMEM211Q6ICI0 200 aa9□□□□□ -0.97
UBR4-216ENST00000494503 QSOX2Q6ZRP7 698 aa9□□□□□ -0.97
UBR4-216ENST00000494503 FRA10AC1Q70Z53 315 aa9□□□□□ -0.97
UBR4-216ENST00000494503 CLNKQ7Z7G1 428 aa9□□□□□ -0.97
UBR4-216ENST00000494503 CCDC71Q8IV32 467 aaPredicted RBP9□□□□□ -0.97
UBR4-216ENST00000494503 PPIL6Q8IXY8 311 aa9□□□□□ -0.97
UBR4-216ENST00000494503 POGLUT1Q8NBL1 392 aa9□□□□□ -0.97
UBR4-216ENST00000494503 C2CD4AQ8NCU7 369 aaPredicted RBP9□□□□□ -0.97
UBR4-216ENST00000494503 MCUQ8NE86 351 aa9□□□□□ -0.97
UBR4-216ENST00000494503 ASB5Q8WWX0 329 aa9□□□□□ -0.97
UBR4-216ENST00000494503 ASB15Q8WXK1 588 aa9□□□□□ -0.97
UBR4-216ENST00000494503 RND1Q92730 232 aa9□□□□□ -0.97
UBR4-216ENST00000494503 CFAP36Q96G28 342 aa9□□□□□ -0.97
UBR4-216ENST00000494503 PDLIM2Q96JY6 352 aa9□□□□□ -0.97
UBR4-216ENST00000494503 DMRTA2Q96SC8 542 aa9□□□□□ -0.97
UBR4-216ENST00000494503 ZNF559Q9BR84 538 aa9□□□□□ -0.97
UBR4-216ENST00000494503 UCK2Q9BZX2 261 aa9□□□□□ -0.97
UBR4-216ENST00000494503 SPNS1Q9H2V7 528 aa9□□□□□ -0.97
UBR4-216ENST00000494503 LIN28AQ9H9Z2 209 aaKnown RBP9□□□□□ -0.97
UBR4-216ENST00000494503 KCNJ16Q9NPI9 418 aa9□□□□□ -0.97
UBR4-216ENST00000494503 TIMMDC1Q9NPL8 285 aa9□□□□□ -0.97
UBR4-216ENST00000494503 NECTIN3Q9NQS3 549 aa9□□□□□ -0.97
UBR4-216ENST00000494503 HPF1Q9NWY4 346 aa9□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms