RNA–Protein interactions for RNA: ENST00000491967.1

SMARCB1-207, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 1 (best)

Gene SMARCB1, Length 605 nt, Biotype processed transcript, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-207ENST00000491967 LRIT2A6NDA9 550 aa7.85□□□□□ -1.15
SMARCB1-207ENST00000491967 URADA6NGE7 173 aa7.85□□□□□ -1.15
SMARCB1-207ENST00000491967 ZNF860A6NHJ4 632 aa7.85□□□□□ -1.15
SMARCB1-207ENST00000491967 A8MUI8 341 aa7.85□□□□□ -1.15
SMARCB1-207ENST00000491967 EIF3HO15372 352 aaKnown RBP eCLIP7.85□□□□□ -1.15
SMARCB1-207ENST00000491967 PRMT3O60678 531 aa7.85□□□□□ -1.15
SMARCB1-207ENST00000491967 B3GALT4O96024 378 aa7.85□□□□□ -1.15
SMARCB1-207ENST00000491967 F10P00742 488 aa7.85□□□□□ -1.15
SMARCB1-207ENST00000491967 C1GALT1C1LP0DN25 315 aa7.85□□□□□ -1.15
SMARCB1-207ENST00000491967 RNH1P13489 461 aaKnown RBP7.85□□□□□ -1.15
SMARCB1-207ENST00000491967 GNAZP19086 355 aa7.85□□□□□ -1.15
SMARCB1-207ENST00000491967 AGAP20933 346 aa7.85□□□□□ -1.15
SMARCB1-207ENST00000491967 OR4D2P58180 307 aa7.85□□□□□ -1.15
SMARCB1-207ENST00000491967 MLF1P58340 268 aa7.85□□□□□ -1.15
SMARCB1-207ENST00000491967 BTG2P78543 158 aa7.85□□□□□ -1.15
SMARCB1-207ENST00000491967 POU4F1Q01851 419 aa7.85□□□□□ -1.15
SMARCB1-207ENST00000491967 PDIA2Q13087 525 aaKnown RBP7.85□□□□□ -1.15
SMARCB1-207ENST00000491967 TGFBIQ15582 683 aa7.85□□□□□ -1.15
SMARCB1-207ENST00000491967 OR1C1Q15619 314 aa7.85□□□□□ -1.15
SMARCB1-207ENST00000491967 ZKSCAN8Q15776 578 aaPredicted RBP7.85□□□□□ -1.15
SMARCB1-207ENST00000491967 FCRLBQ6BAA4 426 aa7.85□□□□□ -1.15
SMARCB1-207ENST00000491967 SPINK14Q6IE38 97 aa7.85□□□□□ -1.15
SMARCB1-207ENST00000491967 GFRALQ6UXV0 394 aa7.85□□□□□ -1.15
SMARCB1-207ENST00000491967 ADAMTSL2Q86TH1 951 aa7.85□□□□□ -1.15
SMARCB1-207ENST00000491967 RPS19BP1Q86WX3 136 aaKnown RBP7.85□□□□□ -1.15
SMARCB1-207ENST00000491967 SLC5A8Q8N695 610 aa7.85□□□□□ -1.15
SMARCB1-207ENST00000491967 APCDD1LQ8NCL9 501 aa7.85□□□□□ -1.15
SMARCB1-207ENST00000491967 BBOF1Q8ND07 529 aa7.85□□□□□ -1.15
SMARCB1-207ENST00000491967 FBXO36Q8NEA4 188 aa7.85□□□□□ -1.15
SMARCB1-207ENST00000491967 SUN3Q8TAQ9 357 aa7.85□□□□□ -1.15
SMARCB1-207ENST00000491967 ALKBH8Q96BT7 664 aaKnown RBP7.85□□□□□ -1.15
SMARCB1-207ENST00000491967 MS4A6EQ96DS6 147 aa7.85□□□□□ -1.15
SMARCB1-207ENST00000491967 VPS39Q96JC1 886 aa7.85□□□□□ -1.15
SMARCB1-207ENST00000491967 FRMD6Q96NE9 622 aa7.85□□□□□ -1.15
SMARCB1-207ENST00000491967 QRFPRQ96P65 431 aa7.85□□□□□ -1.15
SMARCB1-207ENST00000491967 NAPGQ99747 312 aaPredicted RBP7.85□□□□□ -1.15
SMARCB1-207ENST00000491967 UTP23Q9BRU9 249 aaKnown RBP7.85□□□□□ -1.15
SMARCB1-207ENST00000491967 NPLQ9BXD5 320 aaPredicted RBP7.85□□□□□ -1.15
SMARCB1-207ENST00000491967 DERL2Q9GZP9 239 aa7.85□□□□□ -1.15
SMARCB1-207ENST00000491967 PRDM9Q9NQV7 894 aa7.85□□□□□ -1.15
SMARCB1-207ENST00000491967 GPRC5BQ9NZH0 403 aa7.85□□□□□ -1.15
SMARCB1-207ENST00000491967 WHRNQ9P202 907 aa7.85□□□□□ -1.15
SMARCB1-207ENST00000491967 ZFATQ9P243 1243 aa7.85□□□□□ -1.15
SMARCB1-207ENST00000491967 SEC14L3Q9UDX4 400 aa7.85□□□□□ -1.15
SMARCB1-207ENST00000491967 ZNF490Q9ULM2 529 aaPredicted RBP7.85□□□□□ -1.15
SMARCB1-207ENST00000491967 MMACHCQ9Y4U1 282 aa7.85□□□□□ -1.15
SMARCB1-207ENST00000491967 PDZD2O15018 2839 aa7.85□□□□□ -1.15
SMARCB1-207ENST00000491967 TEP1Q99973 2627 aaKnown RBP7.84□□□□□ -1.15
SMARCB1-207ENST00000491967 EML6Q6ZMW3 1958 aa7.84□□□□□ -1.15
SMARCB1-207ENST00000491967 NPEPPSL1A6NEC2 478 aa7.84□□□□□ -1.15
SMARCB1-207ENST00000491967 FAM187AA6NFU0 413 aa7.84□□□□□ -1.15
SMARCB1-207ENST00000491967 SAGE2PA6NJ88 616 aa7.84□□□□□ -1.15
SMARCB1-207ENST00000491967 FAM159BA6NKW6 160 aa7.84□□□□□ -1.15
SMARCB1-207ENST00000491967 GABRR3A8MPY1 467 aa7.84□□□□□ -1.15
SMARCB1-207ENST00000491967 EFCAB8A8MWE9 144 aa7.84□□□□□ -1.15
SMARCB1-207ENST00000491967 CXorf49A8MYA2 514 aaPredicted RBP7.84□□□□□ -1.15
SMARCB1-207ENST00000491967 FAM227AF5H4B4 570 aa7.84□□□□□ -1.15
SMARCB1-207ENST00000491967 CYR61O00622 381 aa7.84□□□□□ -1.15
SMARCB1-207ENST00000491967 NDC80O14777 642 aa7.84□□□□□ -1.15
SMARCB1-207ENST00000491967 TAPBPO15533 448 aa7.84□□□□□ -1.15
SMARCB1-207ENST00000491967 HNRNPRO43390 633 aaKnown RBP7.84□□□□□ -1.15
SMARCB1-207ENST00000491967 NME2P1O60361 137 aa7.84□□□□□ -1.15
SMARCB1-207ENST00000491967 B4GALT2O60909 372 aa7.84□□□□□ -1.15
SMARCB1-207ENST00000491967 CLEC3AO75596 197 aa7.84□□□□□ -1.15
SMARCB1-207ENST00000491967 CDC123O75794 336 aaPredicted RBP7.84□□□□□ -1.15
SMARCB1-207ENST00000491967 UNC5CO95185 931 aa7.84□□□□□ -1.15
SMARCB1-207ENST00000491967 SP1P08047 785 aa7.84□□□□□ -1.15
SMARCB1-207ENST00000491967 GSTA2P09210 222 aa7.84□□□□□ -1.15
SMARCB1-207ENST00000491967 EPORP19235 508 aa7.84□□□□□ -1.15
SMARCB1-207ENST00000491967 NME2P22392 152 aa7.84□□□□□ -1.15
SMARCB1-207ENST00000491967 CASP2P42575 452 aa7.84□□□□□ -1.15
SMARCB1-207ENST00000491967 GDF5P43026 501 aa7.84□□□□□ -1.15
SMARCB1-207ENST00000491967 GNG11P61952 73 aa7.84□□□□□ -1.15
SMARCB1-207ENST00000491967 OLR1P78380 273 aa7.84□□□□□ -1.15
SMARCB1-207ENST00000491967 GUCY2DQ02846 1103 aa7.84□□□□□ -1.15
SMARCB1-207ENST00000491967 ACTN3Q08043 901 aaPredicted RBP7.84□□□□□ -1.15
SMARCB1-207ENST00000491967 RUNX2Q13950 521 aa7.84□□□□□ -1.15
SMARCB1-207ENST00000491967 ZNF460Q14592 562 aa7.84□□□□□ -1.15
SMARCB1-207ENST00000491967 TSNQ15631 228 aaKnown RBP7.84□□□□□ -1.15
SMARCB1-207ENST00000491967 C18orf21Q32NC0 220 aaPredicted RBP7.84□□□□□ -1.15
SMARCB1-207ENST00000491967 RNFT1Q5M7Z0 435 aa7.84□□□□□ -1.15
SMARCB1-207ENST00000491967 ZNF468Q5VIY5 522 aaPredicted RBP7.84□□□□□ -1.15
SMARCB1-207ENST00000491967 SP5Q6BEB4 398 aaPredicted RBP7.84□□□□□ -1.15
SMARCB1-207ENST00000491967 SLC25A25Q6KCM7 469 aa7.84□□□□□ -1.15
SMARCB1-207ENST00000491967 MTFR2Q6P444 385 aa7.84□□□□□ -1.15
SMARCB1-207ENST00000491967 TMIGD1Q6UXZ0 262 aa7.84□□□□□ -1.15
SMARCB1-207ENST00000491967 RPTNQ6XPR3 784 aa7.84□□□□□ -1.15
SMARCB1-207ENST00000491967 VN1R5Q7Z5H4 357 aa7.84□□□□□ -1.15
SMARCB1-207ENST00000491967 FJX1Q86VR8 437 aa7.84□□□□□ -1.15
SMARCB1-207ENST00000491967 ANKMY2Q8IV38 441 aa7.84□□□□□ -1.15
SMARCB1-207ENST00000491967 CA13Q8N1Q1 262 aa7.84□□□□□ -1.15
SMARCB1-207ENST00000491967 ACBD4Q8NC06 268 aa7.84□□□□□ -1.15
SMARCB1-207ENST00000491967 TTLQ8NG68 377 aa7.84□□□□□ -1.15
SMARCB1-207ENST00000491967 ADAMTS18Q8TE60 1221 aa7.84□□□□□ -1.15
SMARCB1-207ENST00000491967 CCDC120Q96HB5 630 aa7.84□□□□□ -1.15
SMARCB1-207ENST00000491967 CAPZA3Q96KX2 299 aa7.84□□□□□ -1.15
SMARCB1-207ENST00000491967 MAGEB10Q96LZ2 347 aaPredicted RBP7.84□□□□□ -1.15
SMARCB1-207ENST00000491967 GPR137Q96N19 417 aa7.84□□□□□ -1.15
SMARCB1-207ENST00000491967 TSNARE1Q96NA8 513 aa7.84□□□□□ -1.15
SMARCB1-207ENST00000491967 PTCHD1Q96NR3 888 aa7.84□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms