RNA–Protein interactions for RNA: ENST00000491028.1

MCF2L-230, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 4

Gene MCF2L, Length 573 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-230ENST00000491028 ACPPP15309 386 aa17.71■□□□□ 0.43
MCF2L-230ENST00000491028 ALOX12P18054 663 aa17.71■□□□□ 0.43
MCF2L-230ENST00000491028 LBPP18428 481 aa17.71■□□□□ 0.43
MCF2L-230ENST00000491028 ARFIP2P53365 341 aa17.71■□□□□ 0.43
MCF2L-230ENST00000491028 SKP1P63208 163 aa17.71■□□□□ 0.43
MCF2L-230ENST00000491028 TARDBPQ13148 414 aaKnown RBP eCLIP17.71■□□□□ 0.43
MCF2L-230ENST00000491028 FAM53BQ14153 422 aa17.71■□□□□ 0.43
MCF2L-230ENST00000491028 HERC3Q15034 1050 aa17.71■□□□□ 0.43
MCF2L-230ENST00000491028 AP5B1Q2VPB7 878 aa17.71■□□□□ 0.43
MCF2L-230ENST00000491028 C6orf136Q5SQH8 315 aa17.71■□□□□ 0.43
MCF2L-230ENST00000491028 OGFOD2Q6N063 350 aa17.71■□□□□ 0.43
MCF2L-230ENST00000491028 CEACAM20Q6UY09 585 aa17.71■□□□□ 0.43
MCF2L-230ENST00000491028 TMPRSS7Q7RTY8 843 aa17.71■□□□□ 0.43
MCF2L-230ENST00000491028 NUDT13Q86X67 352 aa17.71■□□□□ 0.43
MCF2L-230ENST00000491028 PARP9Q8IXQ6 854 aa17.71■□□□□ 0.43
MCF2L-230ENST00000491028 CEP70Q8NHQ1 597 aa17.71■□□□□ 0.43
MCF2L-230ENST00000491028 MVB12AQ96EY5 273 aa17.71■□□□□ 0.43
MCF2L-230ENST00000491028 APIPQ96GX9 242 aa17.71■□□□□ 0.43
MCF2L-230ENST00000491028 C10orf90Q96M02 699 aa17.71■□□□□ 0.43
MCF2L-230ENST00000491028 QRFPRQ96P65 431 aa17.71■□□□□ 0.43
MCF2L-230ENST00000491028 CCT8L2Q96SF2 557 aa17.71■□□□□ 0.43
MCF2L-230ENST00000491028 C17orf62Q9BQA9 187 aa17.71■□□□□ 0.43
MCF2L-230ENST00000491028 EBF4Q9BQW3 602 aa17.71■□□□□ 0.43
MCF2L-230ENST00000491028 NDC1Q9BTX1 674 aa17.71■□□□□ 0.43
MCF2L-230ENST00000491028 KLHL31Q9H511 634 aa17.71■□□□□ 0.43
MCF2L-230ENST00000491028 TCF7L2Q9NQB0 619 aa17.71■□□□□ 0.43
MCF2L-230ENST00000491028 CUTCQ9NTM9 273 aa17.71■□□□□ 0.43
MCF2L-230ENST00000491028 SLC39A1Q9NY26 324 aa17.71■□□□□ 0.43
MCF2L-230ENST00000491028 ADAM29Q9UKF5 820 aa17.71■□□□□ 0.43
MCF2L-230ENST00000491028 PCDHB3Q9Y5E6 796 aa17.71■□□□□ 0.43
MCF2L-230ENST00000491028 GOLGA8QA0A0J9YX86 632 aa17.7■□□□□ 0.42
MCF2L-230ENST00000491028 DCDC2BA2VCK2 349 aa17.7■□□□□ 0.42
MCF2L-230ENST00000491028 GOLGA8OA6NCC3 632 aa17.7■□□□□ 0.42
MCF2L-230ENST00000491028 C4orf51C9J302 202 aa17.7■□□□□ 0.42
MCF2L-230ENST00000491028 GOLGA8NF8WBI6 632 aa17.7■□□□□ 0.42
MCF2L-230ENST00000491028 AGRPO00253 132 aa17.7■□□□□ 0.42
MCF2L-230ENST00000491028 SAP18O00422 153 aaKnown RBP17.7■□□□□ 0.42
MCF2L-230ENST00000491028 SEC22BO75396 215 aa17.7■□□□□ 0.42
MCF2L-230ENST00000491028 SCELO95171 688 aa17.7■□□□□ 0.42
MCF2L-230ENST00000491028 HBQ1P09105 142 aa17.7■□□□□ 0.42
MCF2L-230ENST00000491028 MAPK1P28482 360 aa17.7■□□□□ 0.42
MCF2L-230ENST00000491028 SSR2P43308 183 aa17.7■□□□□ 0.42
MCF2L-230ENST00000491028 PLA2G16P53816 162 aa17.7■□□□□ 0.42
MCF2L-230ENST00000491028 RAB8AP61006 207 aa17.7■□□□□ 0.42
MCF2L-230ENST00000491028 ERVK-8P63133 956 aa17.7■□□□□ 0.42
MCF2L-230ENST00000491028 RPL38P63173 70 aaKnown RBP17.7■□□□□ 0.42
MCF2L-230ENST00000491028 KIAA0040Q15053 153 aa17.7■□□□□ 0.42
MCF2L-230ENST00000491028 GALNTL6Q49A17 601 aa17.7■□□□□ 0.42
MCF2L-230ENST00000491028 OR4C11Q6IEV9 310 aa17.7■□□□□ 0.42
MCF2L-230ENST00000491028 GALNT18Q6P9A2 607 aa17.7■□□□□ 0.42
MCF2L-230ENST00000491028 COMMD6Q7Z4G1 85 aa17.7■□□□□ 0.42
MCF2L-230ENST00000491028 UBE3DQ7Z6J8 389 aa17.7■□□□□ 0.42
MCF2L-230ENST00000491028 TMEM126BQ8IUX1 230 aa17.7■□□□□ 0.42
MCF2L-230ENST00000491028 C1orf52Q8N6N3 182 aaKnown RBP17.7■□□□□ 0.42
MCF2L-230ENST00000491028 FNDC5Q8NAU1 212 aa17.7■□□□□ 0.42
MCF2L-230ENST00000491028 C10orf82Q8WW14 230 aa17.7■□□□□ 0.42
MCF2L-230ENST00000491028 C11orf24Q96F05 449 aaPredicted RBP17.7■□□□□ 0.42
MCF2L-230ENST00000491028 FCRL1Q96LA6 429 aa17.7■□□□□ 0.42
MCF2L-230ENST00000491028 TEFMQ96QE5 360 aaKnown RBP17.7■□□□□ 0.42
MCF2L-230ENST00000491028 ZPBPQ9BS86 351 aa17.7■□□□□ 0.42
MCF2L-230ENST00000491028 DDA1Q9BW61 102 aa17.7■□□□□ 0.42
MCF2L-230ENST00000491028 ZNF717Q9BY31 904 aaPredicted RBP17.7■□□□□ 0.42
MCF2L-230ENST00000491028 COPS7BQ9H9Q2 264 aaPredicted RBP17.7■□□□□ 0.42
MCF2L-230ENST00000491028 ANKHQ9HCJ1 492 aa17.7■□□□□ 0.42
MCF2L-230ENST00000491028 APMAPQ9HDC9 416 aa17.7■□□□□ 0.42
MCF2L-230ENST00000491028 ZNF749O43361 778 aa17.69■□□□□ 0.42
MCF2L-230ENST00000491028 SCRG1O75711 98 aa17.69■□□□□ 0.42
MCF2L-230ENST00000491028 MYO1DO94832 1006 aa17.69■□□□□ 0.42
MCF2L-230ENST00000491028 PCSK2P16519 638 aa17.69■□□□□ 0.42
MCF2L-230ENST00000491028 ITIH1P19827 911 aa17.69■□□□□ 0.42
MCF2L-230ENST00000491028 TIA1P31483 386 aaKnown RBP eCLIP17.69■□□□□ 0.42
MCF2L-230ENST00000491028 BSGP35613 385 aa17.69■□□□□ 0.42
MCF2L-230ENST00000491028 MTTPP55157 894 aa17.69■□□□□ 0.42
MCF2L-230ENST00000491028 EMX2Q04743 252 aa17.69■□□□□ 0.42
MCF2L-230ENST00000491028 PUM1Q14671 1186 aaKnown RBP eCLIP17.69■□□□□ 0.42
MCF2L-230ENST00000491028 LSM12Q3MHD2 195 aaKnown RBP17.69■□□□□ 0.42
MCF2L-230ENST00000491028 DCAF12Q5T6F0 453 aa17.69■□□□□ 0.42
MCF2L-230ENST00000491028 NXNQ6DKJ4 435 aa17.69■□□□□ 0.42
MCF2L-230ENST00000491028 RHBDD2Q6NTF9 364 aa17.69■□□□□ 0.42
MCF2L-230ENST00000491028 DGLUCYQ7Z3D6 616 aa17.69■□□□□ 0.42
MCF2L-230ENST00000491028 SPATA19Q7Z5L4 167 aa17.69■□□□□ 0.42
MCF2L-230ENST00000491028 PIGWQ7Z7B1 504 aa17.69■□□□□ 0.42
MCF2L-230ENST00000491028 RILPQ96NA2 401 aa17.69■□□□□ 0.42
MCF2L-230ENST00000491028 OR52B2Q96RD2 323 aa17.69■□□□□ 0.42
MCF2L-230ENST00000491028 TAAR9Q96RI9 348 aa17.69■□□□□ 0.42
MCF2L-230ENST00000491028 SLC7A5P2Q9GIP4 190 aa17.69■□□□□ 0.42
MCF2L-230ENST00000491028 DDX31Q9H8H2 851 aaKnown RBP17.69■□□□□ 0.42
MCF2L-230ENST00000491028 ACTR5Q9H9F9 607 aaPredicted RBP17.69■□□□□ 0.42
MCF2L-230ENST00000491028 LHX9Q9NQ69 397 aa17.69■□□□□ 0.42
MCF2L-230ENST00000491028 PRDM7Q9NQW5 492 aa17.69■□□□□ 0.42
MCF2L-230ENST00000491028 TXLNGQ9NUQ3 528 aa17.69■□□□□ 0.42
MCF2L-230ENST00000491028 ASIC5Q9NY37 505 aa17.69■□□□□ 0.42
MCF2L-230ENST00000491028 GIMAP2Q9UG22 337 aa17.69■□□□□ 0.42
MCF2L-230ENST00000491028 PISDQ9UG56 409 aa17.69■□□□□ 0.42
MCF2L-230ENST00000491028 MCM8Q9UJA3 840 aa17.69■□□□□ 0.42
MCF2L-230ENST00000491028 MRPS2Q9Y399 296 aaKnown RBP17.69■□□□□ 0.42
MCF2L-230ENST00000491028 PCDHGA8Q9Y5G5 932 aa17.69■□□□□ 0.42
MCF2L-230ENST00000491028 PCDHGA3Q9Y5H0 932 aa17.69■□□□□ 0.42
MCF2L-230ENST00000491028 A0A1B0GX78 115 aa17.68■□□□□ 0.42
MCF2L-230ENST00000491028 RTCAO00442 366 aaKnown RBP17.68■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 65.4 ms