RNA–Protein interactions for RNA: ENST00000490796.1

SREBF1-216, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 2

Gene SREBF1, Length 698 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-216ENST00000490796 SCMH1Q96GD3 660 aa18.5■□□□□ 0.55
SREBF1-216ENST00000490796 GPR137Q96N19 417 aa18.5■□□□□ 0.55
SREBF1-216ENST00000490796 NPAS2Q99743 824 aa18.5■□□□□ 0.55
SREBF1-216ENST00000490796 DEFB126Q9BYW3 111 aa18.5■□□□□ 0.55
SREBF1-216ENST00000490796 TRIM31Q9BZY9 425 aa18.5■□□□□ 0.55
SREBF1-216ENST00000490796 UNKQ9C0B0 810 aaKnown RBP18.5■□□□□ 0.55
SREBF1-216ENST00000490796 SPNS1Q9H2V7 528 aa18.5■□□□□ 0.55
SREBF1-216ENST00000490796 CHST11Q9NPF2 352 aa18.5■□□□□ 0.55
SREBF1-216ENST00000490796 PRDM9Q9NQV7 894 aa18.5■□□□□ 0.55
SREBF1-216ENST00000490796 NSMCE4AQ9NXX6 385 aa18.5■□□□□ 0.55
SREBF1-216ENST00000490796 CTNNAL1Q9UBT7 734 aa18.5■□□□□ 0.55
SREBF1-216ENST00000490796 NPIPA1Q9UND3 350 aa18.5■□□□□ 0.55
SREBF1-216ENST00000490796 CDC7O00311 574 aa18.49■□□□□ 0.55
SREBF1-216ENST00000490796 MAN1A2O60476 641 aa18.49■□□□□ 0.55
SREBF1-216ENST00000490796 DNAJB6O75190 326 aa18.49■□□□□ 0.55
SREBF1-216ENST00000490796 SERPINA6P08185 405 aa18.49■□□□□ 0.55
SREBF1-216ENST00000490796 HTR1EP28566 365 aa18.49■□□□□ 0.55
SREBF1-216ENST00000490796 CYB561P49447 251 aa18.49■□□□□ 0.55
SREBF1-216ENST00000490796 STXBP1P61764 594 aaKnown RBP18.49■□□□□ 0.55
SREBF1-216ENST00000490796 PDIA2Q13087 525 aaKnown RBP18.49■□□□□ 0.55
SREBF1-216ENST00000490796 FRG1Q14331 258 aaKnown RBP18.49■□□□□ 0.55
SREBF1-216ENST00000490796 C3AR1Q16581 482 aa18.49■□□□□ 0.55
SREBF1-216ENST00000490796 TOR1AIP1Q5JTV8 583 aa18.49■□□□□ 0.55
SREBF1-216ENST00000490796 XKRXQ6PP77 449 aa18.49■□□□□ 0.55
SREBF1-216ENST00000490796 BNC2Q6ZN30 1099 aaPredicted RBP18.49■□□□□ 0.55
SREBF1-216ENST00000490796 PNPLA5Q7Z6Z6 429 aaPredicted RBP18.49■□□□□ 0.55
SREBF1-216ENST00000490796 ADAMTSL2Q86TH1 951 aa18.49■□□□□ 0.55
SREBF1-216ENST00000490796 KIF2BQ8N4N8 673 aa18.49■□□□□ 0.55
SREBF1-216ENST00000490796 ELP5Q8TE02 316 aa18.49■□□□□ 0.55
SREBF1-216ENST00000490796 CCT6BQ92526 530 aa18.49■□□□□ 0.55
SREBF1-216ENST00000490796 ANKRD7Q92527 254 aa18.49■□□□□ 0.55
SREBF1-216ENST00000490796 SLC6A16Q9GZN6 736 aa18.49■□□□□ 0.55
SREBF1-216ENST00000490796 PLAC1Q9HBJ0 212 aa18.49■□□□□ 0.55
SREBF1-216ENST00000490796 PRM3Q9NNZ6 103 aa18.49■□□□□ 0.55
SREBF1-216ENST00000490796 IKZF3Q9UKT9 509 aa18.49■□□□□ 0.55
SREBF1-216ENST00000490796 SAGE2PA6NJ88 616 aa18.48■□□□□ 0.55
SREBF1-216ENST00000490796 A8MUA0 341 aa18.48■□□□□ 0.55
SREBF1-216ENST00000490796 FCHO1O14526 889 aa18.48■□□□□ 0.55
SREBF1-216ENST00000490796 SLC25A12O75746 678 aa18.48■□□□□ 0.55
SREBF1-216ENST00000490796 WDR47O94967 919 aa18.48■□□□□ 0.55
SREBF1-216ENST00000490796 ABOP16442 354 aa18.48■□□□□ 0.55
SREBF1-216ENST00000490796 GNAZP19086 355 aa18.48■□□□□ 0.55
SREBF1-216ENST00000490796 MAOAP21397 527 aa18.48■□□□□ 0.55
SREBF1-216ENST00000490796 PAFAH1B1P43034 410 aa18.48■□□□□ 0.55
SREBF1-216ENST00000490796 BTG2P78543 158 aa18.48■□□□□ 0.55
SREBF1-216ENST00000490796 CDKL1Q00532 357 aa18.48■□□□□ 0.55
SREBF1-216ENST00000490796 PPP1R3AQ16821 1122 aa18.48■□□□□ 0.55
SREBF1-216ENST00000490796 ZC3HC1Q86WB0 502 aaKnown RBP18.48■□□□□ 0.55
SREBF1-216ENST00000490796 SPPL2CQ8IUH8 684 aa18.48■□□□□ 0.55
SREBF1-216ENST00000490796 ANKRD53Q8N9V6 530 aa18.48■□□□□ 0.55
SREBF1-216ENST00000490796 FBXO36Q8NEA4 188 aa18.48■□□□□ 0.55
SREBF1-216ENST00000490796 TTLQ8NG68 377 aa18.48■□□□□ 0.55
SREBF1-216ENST00000490796 FRMD6Q96NE9 622 aa18.48■□□□□ 0.55
SREBF1-216ENST00000490796 TRIM51Q9BSJ1 452 aa18.48■□□□□ 0.55
SREBF1-216ENST00000490796 KLHL31Q9H511 634 aa18.48■□□□□ 0.55
SREBF1-216ENST00000490796 GPAMQ9HCL2 828 aa18.48■□□□□ 0.55
SREBF1-216ENST00000490796 TINAGQ9UJW2 476 aa18.48■□□□□ 0.55
SREBF1-216ENST00000490796 OARD1Q9Y530 152 aa18.48■□□□□ 0.55
SREBF1-216ENST00000490796 PSAT1Q9Y617 370 aa18.48■□□□□ 0.55
SREBF1-216ENST00000490796 PKDREJQ9NTG1 2253 aa18.47■□□□□ 0.55
SREBF1-216ENST00000490796 A0A088AWK7 358 aa18.47■□□□□ 0.55
SREBF1-216ENST00000490796 ASPDHA6ND91 283 aa18.47■□□□□ 0.55
SREBF1-216ENST00000490796 EFCAB8A8MWE9 144 aa18.47■□□□□ 0.55
SREBF1-216ENST00000490796 NEURL1O76050 574 aa18.47■□□□□ 0.55
SREBF1-216ENST00000490796 SEC31AO94979 1220 aaKnown RBP18.47■□□□□ 0.55
SREBF1-216ENST00000490796 COX6B1P14854 86 aa18.47■□□□□ 0.55
SREBF1-216ENST00000490796 ZNF24P17028 368 aa18.47■□□□□ 0.55
SREBF1-216ENST00000490796 ZNF10P21506 573 aaPredicted RBP18.47■□□□□ 0.55
SREBF1-216ENST00000490796 TPP2P29144 1249 aaPredicted RBP18.47■□□□□ 0.55
SREBF1-216ENST00000490796 TAS2R39P59534 338 aa18.47■□□□□ 0.55
SREBF1-216ENST00000490796 GNG11P61952 73 aa18.47■□□□□ 0.55
SREBF1-216ENST00000490796 BTN3A2P78410 334 aa18.47■□□□□ 0.55
SREBF1-216ENST00000490796 ILF2Q12905 390 aaKnown RBP18.47■□□□□ 0.55
SREBF1-216ENST00000490796 ZNF460Q14592 562 aa18.47■□□□□ 0.55
SREBF1-216ENST00000490796 KRT78Q8N1N4 520 aa18.47■□□□□ 0.55
SREBF1-216ENST00000490796 GHDCQ8N2G8 530 aa18.47■□□□□ 0.55
SREBF1-216ENST00000490796 CAPS2Q9BXY5 557 aa18.47■□□□□ 0.55
SREBF1-216ENST00000490796 TXNDC16Q9P2K2 825 aa18.47■□□□□ 0.55
SREBF1-216ENST00000490796 TCRBV16S1A1N1A0A5B0 115 aa18.46■□□□□ 0.55
SREBF1-216ENST00000490796 CCDC188H7C350 402 aa18.46■□□□□ 0.55
SREBF1-216ENST00000490796 ASNA1O43681 348 aa18.46■□□□□ 0.55
SREBF1-216ENST00000490796 C1GALT1C1LP0DN25 315 aa18.46■□□□□ 0.55
SREBF1-216ENST00000490796 PRF1P14222 555 aa18.46■□□□□ 0.55
SREBF1-216ENST00000490796 GRNP28799 593 aaKnown RBP18.46■□□□□ 0.55
SREBF1-216ENST00000490796 HPDP32754 393 aaPredicted RBP18.46■□□□□ 0.55
SREBF1-216ENST00000490796 MLF1P58340 268 aa18.46■□□□□ 0.55
SREBF1-216ENST00000490796 TSNQ15631 228 aaKnown RBP18.46■□□□□ 0.55
SREBF1-216ENST00000490796 EID3Q8N140 333 aa18.46■□□□□ 0.55
SREBF1-216ENST00000490796 CA13Q8N1Q1 262 aa18.46■□□□□ 0.55
SREBF1-216ENST00000490796 GAL3ST3Q96A11 431 aa18.46■□□□□ 0.55
SREBF1-216ENST00000490796 WDR83Q9BRX9 315 aaKnown RBP18.46■□□□□ 0.55
SREBF1-216ENST00000490796 RHOJQ9H4E5 214 aa18.46■□□□□ 0.55
SREBF1-216ENST00000490796 MRPS33Q9Y291 106 aaKnown RBP18.46■□□□□ 0.55
SREBF1-216ENST00000490796 MMACHCQ9Y4U1 282 aa18.46■□□□□ 0.55
SREBF1-216ENST00000490796 SAR1BQ9Y6B6 198 aa18.46■□□□□ 0.55
SREBF1-216ENST00000490796 NCF1BA6NI72 391 aaPredicted RBP18.45■□□□□ 0.54
SREBF1-216ENST00000490796 NCF1CA8MVU1 366 aaPredicted RBP18.45■□□□□ 0.54
SREBF1-216ENST00000490796 CLDN4O14493 209 aa18.45■□□□□ 0.54
SREBF1-216ENST00000490796 NME2P1O60361 137 aa18.45■□□□□ 0.54
SREBF1-216ENST00000490796 WISP2O76076 250 aa18.45■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms