RNA–Protein interactions for RNA: ENST00000490389.1

FARP1-207, Transcript of FERM, ARH/RhoGEF and pleckstrin domain protein 1, humanhuman

TSL 2

Gene FARP1, Length 604 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FARP1-207ENST00000490389 GGTA1PQ4G0N0 100 aa11.78□□□□□ -0.52
FARP1-207ENST00000490389 TRIM40Q6P9F5 258 aa11.78□□□□□ -0.52
FARP1-207ENST00000490389 SCIMPQ6UWF3 145 aa11.78□□□□□ -0.52
FARP1-207ENST00000490389 SHISA6Q6ZSJ9 500 aa11.78□□□□□ -0.52
FARP1-207ENST00000490389 CHSY3Q70JA7 882 aa11.78□□□□□ -0.52
FARP1-207ENST00000490389 PDSS2Q86YH6 399 aa11.78□□□□□ -0.52
FARP1-207ENST00000490389 ARHGEF39Q8N4T4 335 aa11.78□□□□□ -0.52
FARP1-207ENST00000490389 WDR20Q8TBZ3 569 aa11.78□□□□□ -0.52
FARP1-207ENST00000490389 AGR3Q8TD06 166 aa11.78□□□□□ -0.52
FARP1-207ENST00000490389 SELENOMQ8WWX9 145 aa11.78□□□□□ -0.52
FARP1-207ENST00000490389 MS4A6EQ96DS6 147 aa11.78□□□□□ -0.52
FARP1-207ENST00000490389 MVB12AQ96EY5 273 aa11.78□□□□□ -0.52
FARP1-207ENST00000490389 CMTM7Q96FZ5 175 aa11.78□□□□□ -0.52
FARP1-207ENST00000490389 SEC16BQ96JE7 1060 aa11.78□□□□□ -0.52
FARP1-207ENST00000490389 CNDP1Q96KN2 507 aa11.78□□□□□ -0.52
FARP1-207ENST00000490389 CCNL2Q96S94 520 aaPredicted RBP11.78□□□□□ -0.52
FARP1-207ENST00000490389 C17orf62Q9BQA9 187 aa11.78□□□□□ -0.52
FARP1-207ENST00000490389 CENPKQ9BS16 269 aa11.78□□□□□ -0.52
FARP1-207ENST00000490389 AICDAQ9GZX7 198 aa11.78□□□□□ -0.52
FARP1-207ENST00000490389 COPS7BQ9H9Q2 264 aaPredicted RBP11.78□□□□□ -0.52
FARP1-207ENST00000490389 SLC22A11Q9NSA0 550 aa11.78□□□□□ -0.52
FARP1-207ENST00000490389 FARSBQ9NSD9 589 aaKnown RBP11.78□□□□□ -0.52
FARP1-207ENST00000490389 CTSFQ9UBX1 484 aa11.78□□□□□ -0.52
FARP1-207ENST00000490389 ADGRE2Q9UHX3 823 aa11.78□□□□□ -0.52
FARP1-207ENST00000490389 SNX6Q9UNH7 406 aa11.78□□□□□ -0.52
FARP1-207ENST00000490389 CHD8Q9HCK8 2581 aa11.78□□□□□ -0.52
FARP1-207ENST00000490389 APC2O95996 2303 aa11.78□□□□□ -0.52
FARP1-207ENST00000490389 C21orf140B9A014 251 aa11.77□□□□□ -0.53
FARP1-207ENST00000490389 C4orf51C9J302 202 aa11.77□□□□□ -0.53
FARP1-207ENST00000490389 RTCAO00442 366 aaKnown RBP11.77□□□□□ -0.53
FARP1-207ENST00000490389 MANBAO00462 879 aa11.77□□□□□ -0.53
FARP1-207ENST00000490389 NPHS1O60500 1241 aa11.77□□□□□ -0.53
FARP1-207ENST00000490389 GALR3O60755 368 aaPredicted RBP11.77□□□□□ -0.53
FARP1-207ENST00000490389 NSA2O95478 260 aaKnown RBP11.77□□□□□ -0.53
FARP1-207ENST00000490389 TBX6O95947 436 aaPredicted RBP11.77□□□□□ -0.53
FARP1-207ENST00000490389 PDYNP01213 254 aa11.77□□□□□ -0.53
FARP1-207ENST00000490389 ENO1P06733 434 aaKnown RBP11.77□□□□□ -0.53
FARP1-207ENST00000490389 DHRS4L1P0CG22 281 aa11.77□□□□□ -0.53
FARP1-207ENST00000490389 SERPINB3P29508 390 aa11.77□□□□□ -0.53
FARP1-207ENST00000490389 HTR6P50406 440 aa11.77□□□□□ -0.53
FARP1-207ENST00000490389 FOXA1P55317 472 aa11.77□□□□□ -0.53
FARP1-207ENST00000490389 WDR4P57081 412 aaKnown RBP11.77□□□□□ -0.53
FARP1-207ENST00000490389 SKP1P63208 163 aa11.77□□□□□ -0.53
FARP1-207ENST00000490389 OCA2Q04671 838 aa11.77□□□□□ -0.53
FARP1-207ENST00000490389 TLE3Q04726 772 aa11.77□□□□□ -0.53
FARP1-207ENST00000490389 DSG2Q14126 1118 aa11.77□□□□□ -0.53
FARP1-207ENST00000490389 RCN2Q14257 317 aa11.77□□□□□ -0.53
FARP1-207ENST00000490389 ARL13AQ5H913 290 aaPredicted RBP11.77□□□□□ -0.53
FARP1-207ENST00000490389 KHDRBS2Q5VWX1 349 aaKnown RBP11.77□□□□□ -0.53
FARP1-207ENST00000490389 CLEC6AQ6EIG7 209 aa11.77□□□□□ -0.53
FARP1-207ENST00000490389 ZNF517Q6ZMY9 492 aaPredicted RBP11.77□□□□□ -0.53
FARP1-207ENST00000490389 COX15Q7KZN9 410 aa11.77□□□□□ -0.53
FARP1-207ENST00000490389 CUZD1Q86UP6 607 aa11.77□□□□□ -0.53
FARP1-207ENST00000490389 OR2L5Q8NG80 312 aa11.77□□□□□ -0.53
FARP1-207ENST00000490389 OR5T3Q8NGG3 340 aa11.77□□□□□ -0.53
FARP1-207ENST00000490389 GAL3ST3Q96A11 431 aa11.77□□□□□ -0.53
FARP1-207ENST00000490389 TRMOQ9BU70 441 aa11.77□□□□□ -0.53
FARP1-207ENST00000490389 EFHD1Q9BUP0 239 aa11.77□□□□□ -0.53
FARP1-207ENST00000490389 RBCK1Q9BYM8 510 aa11.77□□□□□ -0.53
FARP1-207ENST00000490389 SLC29A3Q9BZD2 475 aa11.77□□□□□ -0.53
FARP1-207ENST00000490389 ACTL8Q9H568 366 aa11.77□□□□□ -0.53
FARP1-207ENST00000490389 SOX17Q9H6I2 414 aaPredicted RBP11.77□□□□□ -0.53
FARP1-207ENST00000490389 EML4Q9HC35 981 aaKnown RBP11.77□□□□□ -0.53
FARP1-207ENST00000490389 TNFRSF12AQ9NP84 129 aa11.77□□□□□ -0.53
FARP1-207ENST00000490389 KCND3Q9UK17 655 aa11.77□□□□□ -0.53
FARP1-207ENST00000490389 FARSAQ9Y285 508 aaKnown RBP11.77□□□□□ -0.53
FARP1-207ENST00000490389 PTRH2Q9Y3E5 179 aaKnown RBP11.77□□□□□ -0.53
FARP1-207ENST00000490389 SPTBP11277 2137 aa11.77□□□□□ -0.53
FARP1-207ENST00000490389 SDK2Q58EX2 2172 aa11.77□□□□□ -0.53
FARP1-207ENST00000490389 PCM1Q15154 2024 aa11.76□□□□□ -0.53
FARP1-207ENST00000490389 A0A088AWK7 358 aa11.76□□□□□ -0.53
FARP1-207ENST00000490389 SRRM3A6NNA2 597 aaPredicted RBP11.76□□□□□ -0.53
FARP1-207ENST00000490389 H0YIG0 161 aa11.76□□□□□ -0.53
FARP1-207ENST00000490389 CNOT3O75175 753 aaKnown RBP11.76□□□□□ -0.53
FARP1-207ENST00000490389 DNAJB6O75190 326 aa11.76□□□□□ -0.53
FARP1-207ENST00000490389 ULK1O75385 1050 aa11.76□□□□□ -0.53
FARP1-207ENST00000490389 LYPLA1O75608 230 aaPredicted RBP11.76□□□□□ -0.53
FARP1-207ENST00000490389 ETHE1O95571 254 aa11.76□□□□□ -0.53
FARP1-207ENST00000490389 HSPA4LO95757 839 aa11.76□□□□□ -0.53
FARP1-207ENST00000490389 SERPINE1P05121 402 aa11.76□□□□□ -0.53
FARP1-207ENST00000490389 PRKAR1AP10644 381 aa11.76□□□□□ -0.53
FARP1-207ENST00000490389 WT1P19544 449 aaPredicted RBP11.76□□□□□ -0.53
FARP1-207ENST00000490389 ZNF10P21506 573 aaPredicted RBP11.76□□□□□ -0.53
FARP1-207ENST00000490389 PTX3P26022 381 aaPredicted RBP11.76□□□□□ -0.53
FARP1-207ENST00000490389 PTPN4P29074 926 aa11.76□□□□□ -0.53
FARP1-207ENST00000490389 SSR2P43308 183 aa11.76□□□□□ -0.53
FARP1-207ENST00000490389 TMEM35AQ53FP2 167 aa11.76□□□□□ -0.53
FARP1-207ENST00000490389 HSP90B2PQ58FF3 399 aa11.76□□□□□ -0.53
FARP1-207ENST00000490389 VWA2Q5GFL6 755 aa11.76□□□□□ -0.53
FARP1-207ENST00000490389 DEPDC1Q5TB30 811 aa11.76□□□□□ -0.53
FARP1-207ENST00000490389 MFSD4BQ5TF39 518 aa11.76□□□□□ -0.53
FARP1-207ENST00000490389 ABHD17CQ6PCB6 329 aa11.76□□□□□ -0.53
FARP1-207ENST00000490389 CCDC81Q6ZN84 652 aa11.76□□□□□ -0.53
FARP1-207ENST00000490389 OVCH1Q7RTY7 1134 aa11.76□□□□□ -0.53
FARP1-207ENST00000490389 TMEM151BQ8IW70 566 aa11.76□□□□□ -0.53
FARP1-207ENST00000490389 SHISA5Q8N114 240 aa11.76□□□□□ -0.53
FARP1-207ENST00000490389 AFAP1L2Q8N4X5 818 aa11.76□□□□□ -0.53
FARP1-207ENST00000490389 AMER3Q8N944 861 aa11.76□□□□□ -0.53
FARP1-207ENST00000490389 OR51Q1Q8NH59 317 aa11.76□□□□□ -0.53
FARP1-207ENST00000490389 STARD8Q92502 1023 aa11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms