RNA–Protein interactions for RNA: ENST00000490283.1

SEC13-218, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2

Gene SEC13, Length 740 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-218ENST00000490283 LRRC70Q7Z2Q7 622 aa16.44■□□□□ 0.22
SEC13-218ENST00000490283 PLPP5Q8NEB5 264 aa16.44■□□□□ 0.22
SEC13-218ENST00000490283 ARMC2Q8NEN0 867 aa16.44■□□□□ 0.22
SEC13-218ENST00000490283 OR1N1Q8NGS0 311 aa16.44■□□□□ 0.22
SEC13-218ENST00000490283 PSMF1Q92530 271 aa16.44■□□□□ 0.22
SEC13-218ENST00000490283 GAL3ST3Q96A11 431 aa16.44■□□□□ 0.22
SEC13-218ENST00000490283 PTCD3Q96EY7 689 aaKnown RBP16.44■□□□□ 0.22
SEC13-218ENST00000490283 EFCAB11Q9BUY7 163 aa16.44■□□□□ 0.22
SEC13-218ENST00000490283 NT5DC2Q9H857 520 aa16.44■□□□□ 0.22
SEC13-218ENST00000490283 ASH1LQ9NR48 2969 aaKnown RBP16.43■□□□□ 0.22
SEC13-218ENST00000490283 CLEC18AA5D8T8 446 aa16.43■□□□□ 0.22
SEC13-218ENST00000490283 OR2W5A6NFC9 320 aa16.43■□□□□ 0.22
SEC13-218ENST00000490283 SYCE1LA8MT33 242 aa16.43■□□□□ 0.22
SEC13-218ENST00000490283 A8MUI8 341 aa16.43■□□□□ 0.22
SEC13-218ENST00000490283 TAPBPO15533 448 aa16.43■□□□□ 0.22
SEC13-218ENST00000490283 PRMT3O60678 531 aa16.43■□□□□ 0.22
SEC13-218ENST00000490283 B4GALT2O60909 372 aa16.43■□□□□ 0.22
SEC13-218ENST00000490283 CELA2AP08217 269 aa16.43■□□□□ 0.22
SEC13-218ENST00000490283 EFNA3P52797 238 aa16.43■□□□□ 0.22
SEC13-218ENST00000490283 TAS2R50P59544 299 aa16.43■□□□□ 0.22
SEC13-218ENST00000490283 BTN3A2P78410 334 aa16.43■□□□□ 0.22
SEC13-218ENST00000490283 ZNF33BQ06732 778 aa16.43■□□□□ 0.22
SEC13-218ENST00000490283 TGM3Q08188 693 aa16.43■□□□□ 0.22
SEC13-218ENST00000490283 MRPL49Q13405 166 aaKnown RBP16.43■□□□□ 0.22
SEC13-218ENST00000490283 FAM83EQ2M2I3 478 aa16.43■□□□□ 0.22
SEC13-218ENST00000490283 GLE1Q53GS7 698 aaKnown RBP16.43■□□□□ 0.22
SEC13-218ENST00000490283 FBXO48Q5FWF7 155 aa16.43■□□□□ 0.22
SEC13-218ENST00000490283 MROH9Q5TGP6 573 aa16.43■□□□□ 0.22
SEC13-218ENST00000490283 KLC3Q6P597 504 aa16.43■□□□□ 0.22
SEC13-218ENST00000490283 PAPD4Q6PIY7 484 aaKnown RBP16.43■□□□□ 0.22
SEC13-218ENST00000490283 CLEC18BQ6UXF7 455 aa16.43■□□□□ 0.22
SEC13-218ENST00000490283 CLEC18CQ8NCF0 446 aa16.43■□□□□ 0.22
SEC13-218ENST00000490283 PRR7Q8TB68 274 aa16.43■□□□□ 0.22
SEC13-218ENST00000490283 M1APQ8TC57 530 aa16.43■□□□□ 0.22
SEC13-218ENST00000490283 CREB3L4Q8TEY5 395 aa16.43■□□□□ 0.22
SEC13-218ENST00000490283 IFT81Q8WYA0 676 aa16.43■□□□□ 0.22
SEC13-218ENST00000490283 HAS2Q92819 552 aa16.43■□□□□ 0.22
SEC13-218ENST00000490283 RHBGQ9H310 441 aa16.43■□□□□ 0.22
SEC13-218ENST00000490283 KCNK13Q9HB14 408 aa16.43■□□□□ 0.22
SEC13-218ENST00000490283 LANCL2Q9NS86 450 aa16.43■□□□□ 0.22
SEC13-218ENST00000490283 PTBP2Q9UKA9 531 aaKnown RBP16.43■□□□□ 0.22
SEC13-218ENST00000490283 IKBKGQ9Y6K9 419 aa16.43■□□□□ 0.22
SEC13-218ENST00000490283 CCDC189A1A4V9 331 aa16.42■□□□□ 0.22
SEC13-218ENST00000490283 ANKUB1A6NFN9 424 aa16.42■□□□□ 0.22
SEC13-218ENST00000490283 ERI3O43414 337 aaKnown RBP16.42■□□□□ 0.22
SEC13-218ENST00000490283 KERAO60938 352 aa16.42■□□□□ 0.22
SEC13-218ENST00000490283 CLEC3AO75596 197 aa16.42■□□□□ 0.22
SEC13-218ENST00000490283 B3GALT4O96024 378 aa16.42■□□□□ 0.22
SEC13-218ENST00000490283 SERPINB8P50452 374 aa16.42■□□□□ 0.22
SEC13-218ENST00000490283 IRF8Q02556 426 aa16.42■□□□□ 0.22
SEC13-218ENST00000490283 HYAL2Q12891 473 aa16.42■□□□□ 0.22
SEC13-218ENST00000490283 TRIM40Q6P9F5 258 aa16.42■□□□□ 0.22
SEC13-218ENST00000490283 QSOX2Q6ZRP7 698 aa16.42■□□□□ 0.22
SEC13-218ENST00000490283 TAOK1Q7L7X3 1001 aa16.42■□□□□ 0.22
SEC13-218ENST00000490283 CATSPER1Q8NEC5 780 aa16.42■□□□□ 0.22
SEC13-218ENST00000490283 TSLPQ969D9 159 aa16.42■□□□□ 0.22
SEC13-218ENST00000490283 UBE2E3Q969T4 207 aa16.42■□□□□ 0.22
SEC13-218ENST00000490283 ESAMQ96AP7 390 aa16.42■□□□□ 0.22
SEC13-218ENST00000490283 ZNF354BQ96LW1 612 aa16.42■□□□□ 0.22
SEC13-218ENST00000490283 PTCHD1Q96NR3 888 aa16.42■□□□□ 0.22
SEC13-218ENST00000490283 FMO2Q99518 471 aa16.42■□□□□ 0.22
SEC13-218ENST00000490283 CD244Q9BZW8 370 aa16.42■□□□□ 0.22
SEC13-218ENST00000490283 RNF32Q9H0A6 362 aa16.42■□□□□ 0.22
SEC13-218ENST00000490283 KLHL31Q9H511 634 aa16.42■□□□□ 0.22
SEC13-218ENST00000490283 COPS7BQ9H9Q2 264 aaPredicted RBP16.42■□□□□ 0.22
SEC13-218ENST00000490283 PLA2G3Q9NZ20 509 aa16.42■□□□□ 0.22
SEC13-218ENST00000490283 STMN3Q9NZ72 180 aa16.42■□□□□ 0.22
SEC13-218ENST00000490283 NINJ2Q9NZG7 142 aa16.42■□□□□ 0.22
SEC13-218ENST00000490283 COPG2Q9UBF2 871 aa16.42■□□□□ 0.22
SEC13-218ENST00000490283 OPTCQ9UBM4 332 aa16.42■□□□□ 0.22
SEC13-218ENST00000490283 RP1L1Q8IWN7 2480 aaPredicted RBP16.42■□□□□ 0.22
SEC13-218ENST00000490283 B3GALT2O43825 422 aa16.41■□□□□ 0.22
SEC13-218ENST00000490283 WDPCPO95876 746 aa16.41■□□□□ 0.22
SEC13-218ENST00000490283 INHBAP08476 426 aa16.41■□□□□ 0.22
SEC13-218ENST00000490283 SMIM10L1P0DMW3 83 aa16.41■□□□□ 0.22
SEC13-218ENST00000490283 TYK2P29597 1187 aa16.41■□□□□ 0.22
SEC13-218ENST00000490283 TNFSF10P50591 281 aa16.41■□□□□ 0.22
SEC13-218ENST00000490283 BMPR2Q13873 1038 aa16.41■□□□□ 0.22
SEC13-218ENST00000490283 DOC2AQ14183 400 aa16.41■□□□□ 0.22
SEC13-218ENST00000490283 RCN2Q14257 317 aa16.41■□□□□ 0.22
SEC13-218ENST00000490283 INAQ16352 499 aa16.41■□□□□ 0.22
SEC13-218ENST00000490283 EIF2S3LQ2VIR3 472 aaKnown RBP16.41■□□□□ 0.22
SEC13-218ENST00000490283 RPUSD3Q6P087 351 aaKnown RBP16.41■□□□□ 0.22
SEC13-218ENST00000490283 ISCA2Q86U28 154 aa16.41■□□□□ 0.22
SEC13-218ENST00000490283 RELL1Q8IUW5 271 aa16.41■□□□□ 0.22
SEC13-218ENST00000490283 CYP4X1Q8N118 509 aa16.41■□□□□ 0.22
SEC13-218ENST00000490283 SLC5A8Q8N695 610 aa16.41■□□□□ 0.22
SEC13-218ENST00000490283 BCORP1Q8N888 145 aa16.41■□□□□ 0.22
SEC13-218ENST00000490283 KIF18AQ8NI77 898 aa16.41■□□□□ 0.22
SEC13-218ENST00000490283 ADAMTS18Q8TE60 1221 aa16.41■□□□□ 0.22
SEC13-218ENST00000490283 GRHL3Q8TE85 626 aa16.41■□□□□ 0.22
SEC13-218ENST00000490283 TRIM44Q96DX7 344 aaPredicted RBP16.41■□□□□ 0.22
SEC13-218ENST00000490283 SMIM10Q96HG1 83 aa16.41■□□□□ 0.22
SEC13-218ENST00000490283 NPLQ9BXD5 320 aaPredicted RBP16.41■□□□□ 0.22
SEC13-218ENST00000490283 REXO4Q9GZR2 422 aaKnown RBP16.41■□□□□ 0.22
SEC13-218ENST00000490283 ACSS3Q9H6R3 686 aa16.41■□□□□ 0.22
SEC13-218ENST00000490283 MMP25Q9NPA2 562 aa16.41■□□□□ 0.22
SEC13-218ENST00000490283 PRDM9Q9NQV7 894 aa16.41■□□□□ 0.22
SEC13-218ENST00000490283 SNX15Q9NRS6 342 aa16.41■□□□□ 0.22
SEC13-218ENST00000490283 IGSF5Q9NSI5 407 aa16.41■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms