RNA–Protein interactions for RNA: ENST00000489406.1

UFD1-209, Transcript of ubiquitin recognition factor in ER associated degradation 1, humanhuman

TSL 2

Gene UFD1, Length 994 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UFD1-209ENST00000489406 ICE2Q659A1 982 aa13.85□□□□□ -0.19
UFD1-209ENST00000489406 TMEM214Q6NUQ4 689 aaKnown RBP13.85□□□□□ -0.19
UFD1-209ENST00000489406 VN1R4Q7Z5H5 301 aa13.85□□□□□ -0.19
UFD1-209ENST00000489406 MEX3DQ86XN8 651 aaKnown RBP13.85□□□□□ -0.19
UFD1-209ENST00000489406 B3GNT7Q8NFL0 401 aa13.85□□□□□ -0.19
UFD1-209ENST00000489406 OR6P1Q8NGX9 317 aa13.85□□□□□ -0.19
UFD1-209ENST00000489406 SGMS2Q8NHU3 365 aa13.85□□□□□ -0.19
UFD1-209ENST00000489406 NEIL3Q8TAT5 605 aa13.85□□□□□ -0.19
UFD1-209ENST00000489406 TBC1D20Q96BZ9 403 aa13.85□□□□□ -0.19
UFD1-209ENST00000489406 TRIB1Q96RU8 372 aa13.85□□□□□ -0.19
UFD1-209ENST00000489406 AARSD1Q9BTE6 412 aaKnown RBP13.85□□□□□ -0.19
UFD1-209ENST00000489406 NLE1Q9NVX2 485 aaPredicted RBP13.85□□□□□ -0.19
UFD1-209ENST00000489406 PSD3Q9NYI0 1048 aa13.85□□□□□ -0.19
UFD1-209ENST00000489406 C15orf38-AP3S2A0A0A6YYH1 394 aa13.84□□□□□ -0.19
UFD1-209ENST00000489406 LRRC53A6NM62 1247 aa13.84□□□□□ -0.19
UFD1-209ENST00000489406 SNPHO15079 494 aa13.84□□□□□ -0.19
UFD1-209ENST00000489406 RFPL3SP0C7P2 107 aa13.84□□□□□ -0.19
UFD1-209ENST00000489406 TMIGD3P0DMS9 266 aaPredicted RBP13.84□□□□□ -0.19
UFD1-209ENST00000489406 ZFXP17010 805 aaPredicted RBP13.84□□□□□ -0.19
UFD1-209ENST00000489406 SRD5A1P18405 259 aa13.84□□□□□ -0.19
UFD1-209ENST00000489406 MAOAP21397 527 aa13.84□□□□□ -0.19
UFD1-209ENST00000489406 CRYGSP22914 178 aa13.84□□□□□ -0.19
UFD1-209ENST00000489406 MEF2AQ02078 507 aaPredicted RBP13.84□□□□□ -0.19
UFD1-209ENST00000489406 RELAQ04206 551 aa13.84□□□□□ -0.19
UFD1-209ENST00000489406 PRDX1Q06830 199 aaKnown RBP13.84□□□□□ -0.19
UFD1-209ENST00000489406 FOXF2Q12947 444 aa13.84□□□□□ -0.19
UFD1-209ENST00000489406 FAM174BQ3ZCQ3 159 aa13.84□□□□□ -0.19
UFD1-209ENST00000489406 RNF187Q5TA31 235 aaPredicted RBP13.84□□□□□ -0.19
UFD1-209ENST00000489406 RTL4Q6ZR62 310 aa13.84□□□□□ -0.19
UFD1-209ENST00000489406 ARIH2OSQ8N7S6 290 aa13.84□□□□□ -0.19
UFD1-209ENST00000489406 SACM1LQ9NTJ5 587 aa13.84□□□□□ -0.19
UFD1-209ENST00000489406 ABCF3Q9NUQ8 709 aa13.84□□□□□ -0.19
UFD1-209ENST00000489406 TMEM160Q9NX00 188 aa13.84□□□□□ -0.19
UFD1-209ENST00000489406 SPATA7Q9P0W8 599 aa13.84□□□□□ -0.19
UFD1-209ENST00000489406 MBD3L3A6NE82 208 aaPredicted RBP13.83□□□□□ -0.2
UFD1-209ENST00000489406 C3orf70A6NLC5 250 aaPredicted RBP13.83□□□□□ -0.2
UFD1-209ENST00000489406 ANXA9O76027 345 aa13.83□□□□□ -0.2
UFD1-209ENST00000489406 MYO1DO94832 1006 aa13.83□□□□□ -0.2
UFD1-209ENST00000489406 PROSCO94903 275 aa13.83□□□□□ -0.2
UFD1-209ENST00000489406 CYP1A2P05177 515 aa13.83□□□□□ -0.2
UFD1-209ENST00000489406 JAK1P23458 1154 aa13.83□□□□□ -0.2
UFD1-209ENST00000489406 ACVR1BP36896 505 aa13.83□□□□□ -0.2
UFD1-209ENST00000489406 KRT222Q8N1A0 295 aa13.83□□□□□ -0.2
UFD1-209ENST00000489406 KCT2Q8NC54 265 aa13.83□□□□□ -0.2
UFD1-209ENST00000489406 MBD3L2Q8NHZ7 208 aaPredicted RBP13.83□□□□□ -0.2
UFD1-209ENST00000489406 GSDMBQ8TAX9 411 aa13.83□□□□□ -0.2
UFD1-209ENST00000489406 SMPDL3AQ92484 453 aa13.83□□□□□ -0.2
UFD1-209ENST00000489406 SCYL1Q96KG9 808 aa13.83□□□□□ -0.2
UFD1-209ENST00000489406 RASL10BQ96S79 203 aa13.83□□□□□ -0.2
UFD1-209ENST00000489406 VAT1Q99536 393 aa13.83□□□□□ -0.2
UFD1-209ENST00000489406 TIMP4Q99727 224 aa13.83□□□□□ -0.2
UFD1-209ENST00000489406 CCDC77Q9BR77 488 aa13.83□□□□□ -0.2
UFD1-209ENST00000489406 ZNF703Q9H7S9 590 aaPredicted RBP13.83□□□□□ -0.2
UFD1-209ENST00000489406 SAMD15Q9P1V8 674 aa13.83□□□□□ -0.2
UFD1-209ENST00000489406 CAMK2AQ9UQM7 478 aa13.83□□□□□ -0.2
UFD1-209ENST00000489406 ATG4BQ9Y4P1 393 aa13.83□□□□□ -0.2
UFD1-209ENST00000489406 TCRBV16S1A1N1A0A5B0 115 aa13.82□□□□□ -0.2
UFD1-209ENST00000489406 CD8B2A6NJW9 211 aa13.82□□□□□ -0.2
UFD1-209ENST00000489406 ZNF487B1APH4 448 aa13.82□□□□□ -0.2
UFD1-209ENST00000489406 F8W8V4 182 aa13.82□□□□□ -0.2
UFD1-209ENST00000489406 WWP2O00308 870 aa13.82□□□□□ -0.2
UFD1-209ENST00000489406 ZFAND5O76080 213 aa13.82□□□□□ -0.2
UFD1-209ENST00000489406 CCNDBP1O95273 360 aa13.82□□□□□ -0.2
UFD1-209ENST00000489406 P04436 131 aa13.82□□□□□ -0.2
UFD1-209ENST00000489406 CCL3P10147 92 aa13.82□□□□□ -0.2
UFD1-209ENST00000489406 SKILP12757 684 aa13.82□□□□□ -0.2
UFD1-209ENST00000489406 PECAM1P16284 738 aaPredicted RBP13.82□□□□□ -0.2
UFD1-209ENST00000489406 MSNP26038 577 aaKnown RBP13.82□□□□□ -0.2
UFD1-209ENST00000489406 LOXP28300 417 aaPredicted RBP13.82□□□□□ -0.2
UFD1-209ENST00000489406 CPOXP36551 454 aa13.82□□□□□ -0.2
UFD1-209ENST00000489406 PIGAP37287 484 aa13.82□□□□□ -0.2
UFD1-209ENST00000489406 OLR1P78380 273 aa13.82□□□□□ -0.2
UFD1-209ENST00000489406 TAP2Q03519 686 aa13.82□□□□□ -0.2
UFD1-209ENST00000489406 FAM27E3Q08E93 113 aa13.82□□□□□ -0.2
UFD1-209ENST00000489406 ETFDHQ16134 617 aa13.82□□□□□ -0.2
UFD1-209ENST00000489406 CDKAL1Q5VV42 579 aa13.82□□□□□ -0.2
UFD1-209ENST00000489406 E4F1Q66K89 784 aaPredicted RBP13.82□□□□□ -0.2
UFD1-209ENST00000489406 DENND5AQ6IQ26 1287 aa13.82□□□□□ -0.2
UFD1-209ENST00000489406 C9orf106Q8NAJ2 232 aa13.82□□□□□ -0.2
UFD1-209ENST00000489406 FBXO15Q8NCQ5 510 aaPredicted RBP13.82□□□□□ -0.2
UFD1-209ENST00000489406 NCLNQ969V3 563 aa13.82□□□□□ -0.2
UFD1-209ENST00000489406 NTNG2Q96CW9 530 aa13.82□□□□□ -0.2
UFD1-209ENST00000489406 VMP1Q96GC9 406 aa13.82□□□□□ -0.2
UFD1-209ENST00000489406 ERGIC2Q96RQ1 377 aa13.82□□□□□ -0.2
UFD1-209ENST00000489406 MED18Q9BUE0 208 aa13.82□□□□□ -0.2
UFD1-209ENST00000489406 CARD6Q9BX69 1037 aa13.82□□□□□ -0.2
UFD1-209ENST00000489406 TSSK1BQ9BXA7 367 aa13.82□□□□□ -0.2
UFD1-209ENST00000489406 ANGPTL4Q9BY76 406 aa13.82□□□□□ -0.2
UFD1-209ENST00000489406 ACKR4Q9NPB9 350 aa13.82□□□□□ -0.2
UFD1-209ENST00000489406 NECTIN3Q9NQS3 549 aa13.82□□□□□ -0.2
UFD1-209ENST00000489406 R3HDM2Q9Y2K5 976 aaKnown RBP13.82□□□□□ -0.2
UFD1-209ENST00000489406 MRFAP1Q9Y605 127 aa13.82□□□□□ -0.2
UFD1-209ENST00000489406 NCKAP5O14513 1909 aa13.82□□□□□ -0.2
UFD1-209ENST00000489406 DOCK7Q96N67 2140 aa13.81□□□□□ -0.2
UFD1-209ENST00000489406 LGALS16A8MUM7 142 aa13.81□□□□□ -0.2
UFD1-209ENST00000489406 H7BY64 318 aa13.81□□□□□ -0.2
UFD1-209ENST00000489406 CHST10O43529 356 aa13.81□□□□□ -0.2
UFD1-209ENST00000489406 KIF5CO60282 957 aa13.81□□□□□ -0.2
UFD1-209ENST00000489406 TMCC2O75069 709 aa13.81□□□□□ -0.2
UFD1-209ENST00000489406 AOAHP28039 575 aa13.81□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms