RNA–Protein interactions for RNA: ENST00000489241.1

XRN1-213, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 3

Gene XRN1, Length 393 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-213ENST00000489241 OR4C15Q8NGM1 316 aa3.84□□□□□ -1.79
XRN1-213ENST00000489241 CHURC1Q8WUH1 139 aa3.84□□□□□ -1.79
XRN1-213ENST00000489241 SEPT8Q92599 483 aa3.84□□□□□ -1.79
XRN1-213ENST00000489241 ULK4Q96C45 1275 aa3.84□□□□□ -1.79
XRN1-213ENST00000489241 ALG14Q96F25 216 aa3.84□□□□□ -1.79
XRN1-213ENST00000489241 NSMCE2Q96MF7 247 aa3.84□□□□□ -1.79
XRN1-213ENST00000489241 UHRF2Q96PU4 802 aa3.84□□□□□ -1.79
XRN1-213ENST00000489241 KCNK16Q96T55 309 aa3.84□□□□□ -1.79
XRN1-213ENST00000489241 NYXQ9GZU5 481 aa3.84□□□□□ -1.79
XRN1-213ENST00000489241 DDX47Q9H0S4 455 aaKnown RBP3.84□□□□□ -1.79
XRN1-213ENST00000489241 THAP2Q9H0W7 228 aa3.84□□□□□ -1.79
XRN1-213ENST00000489241 DPEP3Q9H4B8 488 aa3.84□□□□□ -1.79
XRN1-213ENST00000489241 EGLN3Q9H6Z9 239 aa3.84□□□□□ -1.79
XRN1-213ENST00000489241 ZNF334Q9HCZ1 680 aaPredicted RBP3.84□□□□□ -1.79
XRN1-213ENST00000489241 FLRT3Q9NZU0 649 aa3.84□□□□□ -1.79
XRN1-213ENST00000489241 PILRBQ9UKJ0 227 aa3.84□□□□□ -1.79
XRN1-213ENST00000489241 MAN1B1Q9UKM7 699 aa3.84□□□□□ -1.79
XRN1-213ENST00000489241 TMCC3Q9ULS5 477 aa3.84□□□□□ -1.79
XRN1-213ENST00000489241 NCKAP1Q9Y2A7 1128 aa3.84□□□□□ -1.79
XRN1-213ENST00000489241 PLEKHA6Q9Y2H5 1048 aa3.84□□□□□ -1.79
XRN1-213ENST00000489241 IGHV4-61A0A0C4DH41 118 aa3.83□□□□□ -1.8
XRN1-213ENST00000489241 CCDC162PA2VCL2 907 aa3.83□□□□□ -1.8
XRN1-213ENST00000489241 ARHGAP42A6NI28 874 aa3.83□□□□□ -1.8
XRN1-213ENST00000489241 SNURFLB1AK76 121 aa3.83□□□□□ -1.8
XRN1-213ENST00000489241 ZNF732B4DXR9 585 aa3.83□□□□□ -1.8
XRN1-213ENST00000489241 RASGRF2O14827 1237 aa3.83□□□□□ -1.8
XRN1-213ENST00000489241 MLNRO43193 412 aa3.83□□□□□ -1.8
XRN1-213ENST00000489241 SMPD2O60906 423 aa3.83□□□□□ -1.8
XRN1-213ENST00000489241 ATP6V1G1O75348 118 aa3.83□□□□□ -1.8
XRN1-213ENST00000489241 CDK2AP2O75956 126 aa3.83□□□□□ -1.8
XRN1-213ENST00000489241 OR6B1O95007 311 aa3.83□□□□□ -1.8
XRN1-213ENST00000489241 IGHV4-59P01825 116 aa3.83□□□□□ -1.8
XRN1-213ENST00000489241 CXCL10P02778 98 aa3.83□□□□□ -1.8
XRN1-213ENST00000489241 PGK2P07205 417 aa3.83□□□□□ -1.8
XRN1-213ENST00000489241 ODC1P11926 461 aa3.83□□□□□ -1.8
XRN1-213ENST00000489241 B4GALT1P15291 398 aa3.83□□□□□ -1.8
XRN1-213ENST00000489241 PAX1P15863 534 aa3.83□□□□□ -1.8
XRN1-213ENST00000489241 CYP3A5P20815 502 aa3.83□□□□□ -1.8
XRN1-213ENST00000489241 ANOS1P23352 680 aa3.83□□□□□ -1.8
XRN1-213ENST00000489241 MARK3P27448 753 aa3.83□□□□□ -1.8
XRN1-213ENST00000489241 GJB2P29033 226 aa3.83□□□□□ -1.8
XRN1-213ENST00000489241 KIF5BP33176 963 aa3.83□□□□□ -1.8
XRN1-213ENST00000489241 DNA2P51530 1060 aa3.83□□□□□ -1.8
XRN1-213ENST00000489241 GMFBP60983 142 aa3.83□□□□□ -1.8
XRN1-213ENST00000489241 MSLNQ13421 630 aaPredicted RBP3.83□□□□□ -1.8
XRN1-213ENST00000489241 P2RY6Q15077 328 aa3.83□□□□□ -1.8
XRN1-213ENST00000489241 STX1AQ16623 288 aa3.83□□□□□ -1.8
XRN1-213ENST00000489241 WDR38Q5JTN6 314 aa3.83□□□□□ -1.8
XRN1-213ENST00000489241 STPG1Q5TH74 334 aa3.83□□□□□ -1.8
XRN1-213ENST00000489241 LCN1P1Q5VSP4 162 aa3.83□□□□□ -1.8
XRN1-213ENST00000489241 GALNT17Q6IS24 598 aa3.83□□□□□ -1.8
XRN1-213ENST00000489241 ADCK1Q86TW2 530 aa3.83□□□□□ -1.8
XRN1-213ENST00000489241 HSCBQ8IWL3 235 aa3.83□□□□□ -1.8
XRN1-213ENST00000489241 KIRREL3Q8IZU9 778 aa3.83□□□□□ -1.8
XRN1-213ENST00000489241 SLC37A3Q8NCC5 494 aa3.83□□□□□ -1.8
XRN1-213ENST00000489241 FCAMRQ8WWV6 532 aa3.83□□□□□ -1.8
XRN1-213ENST00000489241 TMEM143Q96AN5 459 aa3.83□□□□□ -1.8
XRN1-213ENST00000489241 ESAMQ96AP7 390 aa3.83□□□□□ -1.8
XRN1-213ENST00000489241 NXPE2Q96DL1 559 aa3.83□□□□□ -1.8
XRN1-213ENST00000489241 ZNF354BQ96LW1 612 aa3.83□□□□□ -1.8
XRN1-213ENST00000489241 GUCD1Q96NT3 240 aa3.83□□□□□ -1.8
XRN1-213ENST00000489241 NODALQ96S42 347 aa3.83□□□□□ -1.8
XRN1-213ENST00000489241 BICC1Q9H694 974 aaKnown RBP3.83□□□□□ -1.8
XRN1-213ENST00000489241 GPN1Q9HCN4 374 aaPredicted RBP3.83□□□□□ -1.8
XRN1-213ENST00000489241 INTS9Q9NV88 658 aaKnown RBP3.83□□□□□ -1.8
XRN1-213ENST00000489241 TBC1D13Q9NVG8 400 aa3.83□□□□□ -1.8
XRN1-213ENST00000489241 SOHLH2Q9NX45 425 aa3.83□□□□□ -1.8
XRN1-213ENST00000489241 NDUFA13Q9P0J0 144 aa3.83□□□□□ -1.8
XRN1-213ENST00000489241 C19orf25Q9UFG5 118 aaPredicted RBP3.83□□□□□ -1.8
XRN1-213ENST00000489241 SH3BGRL2Q9UJC5 107 aa3.83□□□□□ -1.8
XRN1-213ENST00000489241 FBXL4Q9UKA2 621 aa3.83□□□□□ -1.8
XRN1-213ENST00000489241 COLEC10Q9Y6Z7 277 aa3.83□□□□□ -1.8
XRN1-213ENST00000489241 ATP8B3O60423 1300 aa3.83□□□□□ -1.8
XRN1-213ENST00000489241 FAM205AQ6ZU69 1335 aa3.83□□□□□ -1.8
XRN1-213ENST00000489241 CHUKO15111 745 aa3.82□□□□□ -1.8
XRN1-213ENST00000489241 GMNNO75496 209 aa3.82□□□□□ -1.8
XRN1-213ENST00000489241 NGFP01138 241 aa3.82□□□□□ -1.8
XRN1-213ENST00000489241 MT-ND2P03891 347 aa3.82□□□□□ -1.8
XRN1-213ENST00000489241 GPIP06744 558 aa3.82□□□□□ -1.8
XRN1-213ENST00000489241 ZNF18P17022 549 aa3.82□□□□□ -1.8
XRN1-213ENST00000489241 ARF4P18085 180 aaPredicted RBP3.82□□□□□ -1.8
XRN1-213ENST00000489241 CHRNA3P32297 505 aa3.82□□□□□ -1.8
XRN1-213ENST00000489241 OR1D2P34982 312 aa3.82□□□□□ -1.8
XRN1-213ENST00000489241 ASMTP46597 345 aa3.82□□□□□ -1.8
XRN1-213ENST00000489241 PITPNBP48739 271 aa3.82□□□□□ -1.8
XRN1-213ENST00000489241 TNFSF10P50591 281 aa3.82□□□□□ -1.8
XRN1-213ENST00000489241 OR1D5P58170 312 aa3.82□□□□□ -1.8
XRN1-213ENST00000489241 MYL7Q01449 175 aa3.82□□□□□ -1.8
XRN1-213ENST00000489241 TRIM29Q14134 588 aa3.82□□□□□ -1.8
XRN1-213ENST00000489241 GIT2Q14161 759 aa3.82□□□□□ -1.8
XRN1-213ENST00000489241 KARSQ15046 597 aaKnown RBP3.82□□□□□ -1.8
XRN1-213ENST00000489241 PSRC1Q6PGN9 363 aaPredicted RBP3.82□□□□□ -1.8
XRN1-213ENST00000489241 MACC1Q6ZN28 852 aa3.82□□□□□ -1.8
XRN1-213ENST00000489241 SLC24A5Q71RS6 500 aa3.82□□□□□ -1.8
XRN1-213ENST00000489241 TAF8Q7Z7C8 310 aa3.82□□□□□ -1.8
XRN1-213ENST00000489241 SMIM29Q86T20 159 aa3.82□□□□□ -1.8
XRN1-213ENST00000489241 DCUN1D3Q8IWE4 304 aa3.82□□□□□ -1.8
XRN1-213ENST00000489241 ARL6IP6Q8N6S5 226 aa3.82□□□□□ -1.8
XRN1-213ENST00000489241 RNF149Q8NC42 400 aa3.82□□□□□ -1.8
XRN1-213ENST00000489241 KLHDC9Q8NEP7 349 aa3.82□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms