RNA–Protein interactions for RNA: ENST00000489037.1

BRCA1-218, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 4

Gene BRCA1, Length 455 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-218ENST00000489037 WFS1O76024 890 aa13.48□□□□□ -0.25
BRCA1-218ENST00000489037 FHP07954 510 aa13.48□□□□□ -0.25
BRCA1-218ENST00000489037 PCNAP12004 261 aa13.48□□□□□ -0.25
BRCA1-218ENST00000489037 COX6A1P12074 109 aa13.48□□□□□ -0.25
BRCA1-218ENST00000489037 RNH1P13489 461 aaKnown RBP13.48□□□□□ -0.25
BRCA1-218ENST00000489037 MTHFD2P13995 350 aa13.48□□□□□ -0.25
BRCA1-218ENST00000489037 SERPINB1P30740 379 aa13.48□□□□□ -0.25
BRCA1-218ENST00000489037 ARL1P40616 181 aaPredicted RBP13.48□□□□□ -0.25
BRCA1-218ENST00000489037 SNRPNP63162 240 aaKnown RBP13.48□□□□□ -0.25
BRCA1-218ENST00000489037 OLR1P78380 273 aa13.48□□□□□ -0.25
BRCA1-218ENST00000489037 PHEXP78562 749 aa13.48□□□□□ -0.25
BRCA1-218ENST00000489037 TLE1Q04724 770 aa13.48□□□□□ -0.25
BRCA1-218ENST00000489037 ACTN3Q08043 901 aaPredicted RBP13.48□□□□□ -0.25
BRCA1-218ENST00000489037 HYAL2Q12891 473 aa13.48□□□□□ -0.25
BRCA1-218ENST00000489037 NAA30Q147X3 362 aaPredicted RBP13.48□□□□□ -0.25
BRCA1-218ENST00000489037 PCBP2Q15366 365 aaKnown RBP eCLIP13.48□□□□□ -0.252e-7■■■□□ 17.1
BRCA1-218ENST00000489037 METTL2BQ6P1Q9 378 aaKnown RBP13.48□□□□□ -0.25
BRCA1-218ENST00000489037 CPEB2Q7Z5Q1 589 aaKnown RBP13.48□□□□□ -0.25
BRCA1-218ENST00000489037 MYLK4Q86YV6 388 aaPredicted RBP13.48□□□□□ -0.25
BRCA1-218ENST00000489037 PLD6Q8N2A8 252 aaKnown RBP13.48□□□□□ -0.25
BRCA1-218ENST00000489037 LRRN4CLQ8ND94 238 aa13.48□□□□□ -0.25
BRCA1-218ENST00000489037 SRFBP1Q8NEF9 429 aaKnown RBP13.48□□□□□ -0.25
BRCA1-218ENST00000489037 ARMC2Q8NEN0 867 aa13.48□□□□□ -0.25
BRCA1-218ENST00000489037 OR5T3Q8NGG3 340 aa13.48□□□□□ -0.25
BRCA1-218ENST00000489037 UBLCP1Q8WVY7 318 aaPredicted RBP13.48□□□□□ -0.25
BRCA1-218ENST00000489037 ATP6V1E2Q96A05 226 aa13.48□□□□□ -0.25
BRCA1-218ENST00000489037 GPR78Q96P69 363 aa13.48□□□□□ -0.25
BRCA1-218ENST00000489037 NPLQ9BXD5 320 aaPredicted RBP13.48□□□□□ -0.25
BRCA1-218ENST00000489037 TRIM4Q9C037 500 aa13.48□□□□□ -0.25
BRCA1-218ENST00000489037 REXO4Q9GZR2 422 aaKnown RBP13.48□□□□□ -0.25
BRCA1-218ENST00000489037 ZNF700Q9H0M5 742 aa13.48□□□□□ -0.25
BRCA1-218ENST00000489037 EPN3Q9H201 632 aa13.48□□□□□ -0.25
BRCA1-218ENST00000489037 RHBGQ9H310 441 aa13.48□□□□□ -0.25
BRCA1-218ENST00000489037 SLAMF7Q9NQ25 335 aa13.48□□□□□ -0.25
BRCA1-218ENST00000489037 FETUBQ9UGM5 382 aa13.48□□□□□ -0.25
BRCA1-218ENST00000489037 ADGRE2Q9UHX3 823 aa13.48□□□□□ -0.25
BRCA1-218ENST00000489037 RP1L1Q8IWN7 2480 aaPredicted RBP13.48□□□□□ -0.25
BRCA1-218ENST00000489037 BOD1L1Q8NFC6 3051 aa13.48□□□□□ -0.25
BRCA1-218ENST00000489037 LRIT2A6NDA9 550 aa13.47□□□□□ -0.25
BRCA1-218ENST00000489037 B3GALT2O43825 422 aa13.47□□□□□ -0.25
BRCA1-218ENST00000489037 KLK8O60259 260 aa13.47□□□□□ -0.25
BRCA1-218ENST00000489037 CDC123O75794 336 aaPredicted RBP13.47□□□□□ -0.25
BRCA1-218ENST00000489037 SERPINA7P05543 415 aa13.47□□□□□ -0.25
BRCA1-218ENST00000489037 SMIM10L1P0DMW3 83 aa13.47□□□□□ -0.25
BRCA1-218ENST00000489037 GTF2H2Q13888 395 aa13.47□□□□□ -0.25
BRCA1-218ENST00000489037 RCN2Q14257 317 aa13.47□□□□□ -0.25
BRCA1-218ENST00000489037 NSDHLQ15738 373 aa13.47□□□□□ -0.25
BRCA1-218ENST00000489037 NADK2Q4G0N4 442 aa13.47□□□□□ -0.25
BRCA1-218ENST00000489037 LIPJQ5W064 366 aa13.47□□□□□ -0.25
BRCA1-218ENST00000489037 GTF2H2CQ6P1K8 395 aa13.47□□□□□ -0.25
BRCA1-218ENST00000489037 ISLR2Q6UXK2 745 aa13.47□□□□□ -0.25
BRCA1-218ENST00000489037 TIFABQ6ZNK6 161 aa13.47□□□□□ -0.25
BRCA1-218ENST00000489037 RIPOR1Q6ZS17 1223 aa13.47□□□□□ -0.25
BRCA1-218ENST00000489037 CHSY3Q70JA7 882 aa13.47□□□□□ -0.25
BRCA1-218ENST00000489037 GSPT2Q8IYD1 628 aaKnown RBP13.47□□□□□ -0.25
BRCA1-218ENST00000489037 EFCAB3Q8N7B9 438 aa13.47□□□□□ -0.25
BRCA1-218ENST00000489037 PLPP5Q8NEB5 264 aa13.47□□□□□ -0.25
BRCA1-218ENST00000489037 OR2L5Q8NG80 312 aa13.47□□□□□ -0.25
BRCA1-218ENST00000489037 REPS1Q96D71 796 aa13.47□□□□□ -0.25
BRCA1-218ENST00000489037 MS4A6EQ96DS6 147 aa13.47□□□□□ -0.25
BRCA1-218ENST00000489037 SMIM10Q96HG1 83 aa13.47□□□□□ -0.25
BRCA1-218ENST00000489037 MRPL57Q9BQC6 102 aaKnown RBP13.47□□□□□ -0.25
BRCA1-218ENST00000489037 CENPKQ9BS16 269 aa13.47□□□□□ -0.25
BRCA1-218ENST00000489037 MFRPQ9BY79 579 aa13.47□□□□□ -0.25
BRCA1-218ENST00000489037 RBCK1Q9BYM8 510 aa13.47□□□□□ -0.25
BRCA1-218ENST00000489037 TXLNGYQ9BZA5 131 aa13.47□□□□□ -0.25
BRCA1-218ENST00000489037 ROGDIQ9GZN7 287 aa13.47□□□□□ -0.25
BRCA1-218ENST00000489037 MRPL46Q9H2W6 279 aaKnown RBP13.47□□□□□ -0.25
BRCA1-218ENST00000489037 ACTR8Q9H981 624 aa13.47□□□□□ -0.25
BRCA1-218ENST00000489037 ZNF358Q9NW07 568 aa13.47□□□□□ -0.25
BRCA1-218ENST00000489037 PSMC3IPQ9P2W1 217 aaPredicted RBP13.47□□□□□ -0.25
BRCA1-218ENST00000489037 XPR1Q9UBH6 696 aa13.47□□□□□ -0.25
BRCA1-218ENST00000489037 ZNF490Q9ULM2 529 aaPredicted RBP13.47□□□□□ -0.25
BRCA1-218ENST00000489037 ASB1Q9Y576 335 aa13.47□□□□□ -0.25
BRCA1-218ENST00000489037 PCDHGA11Q9Y5H2 935 aa13.47□□□□□ -0.25
BRCA1-218ENST00000489037 NBASA2RRP1 2371 aa13.47□□□□□ -0.25
BRCA1-218ENST00000489037 A0A1W2PQ72 361 aa13.46□□□□□ -0.25
BRCA1-218ENST00000489037 MAGEB17A8MXT2 336 aa13.46□□□□□ -0.25
BRCA1-218ENST00000489037 PRMT3O60678 531 aa13.46□□□□□ -0.25
BRCA1-218ENST00000489037 UGDHO60701 494 aa13.46□□□□□ -0.25
BRCA1-218ENST00000489037 B4GALT2O60909 372 aa13.46□□□□□ -0.25
BRCA1-218ENST00000489037 B3GALT4O96024 378 aa13.46□□□□□ -0.25
BRCA1-218ENST00000489037 EPORP19235 508 aa13.46□□□□□ -0.25
BRCA1-218ENST00000489037 TAC1P20366 129 aa13.46□□□□□ -0.25
BRCA1-218ENST00000489037 TNFRSF8P28908 595 aa13.46□□□□□ -0.25
BRCA1-218ENST00000489037 PLA2G16P53816 162 aa13.46□□□□□ -0.25
BRCA1-218ENST00000489037 PCDH1Q08174 1060 aa13.46□□□□□ -0.25
BRCA1-218ENST00000489037 ABRAXAS2Q15018 415 aa13.46□□□□□ -0.25
BRCA1-218ENST00000489037 PCOLCEQ15113 449 aa13.46□□□□□ -0.25
BRCA1-218ENST00000489037 CRB2Q5IJ48 1285 aa13.46□□□□□ -0.25
BRCA1-218ENST00000489037 COLEC12Q5KU26 742 aa13.46□□□□□ -0.25
BRCA1-218ENST00000489037 GRHL2Q6ISB3 625 aa13.46□□□□□ -0.25
BRCA1-218ENST00000489037 JMJD6Q6NYC1 403 aaPredicted RBP13.46□□□□□ -0.25
BRCA1-218ENST00000489037 IGFL3Q6UXB1 125 aa13.46□□□□□ -0.25
BRCA1-218ENST00000489037 ANKRD37Q7Z713 158 aa13.46□□□□□ -0.25
BRCA1-218ENST00000489037 LCA5Q86VQ0 697 aa13.46□□□□□ -0.25
BRCA1-218ENST00000489037 PTGR2Q8N8N7 351 aaPredicted RBP13.46□□□□□ -0.25
BRCA1-218ENST00000489037 ADAMTS18Q8TE60 1221 aa13.46□□□□□ -0.25
BRCA1-218ENST00000489037 PNPLA2Q96AD5 504 aa13.46□□□□□ -0.25
BRCA1-218ENST00000489037 PHF21BQ96EK2 531 aa13.46□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms