RNA–Protein interactions for RNA: ENST00000488905.1

HDAC6-231, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 492 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-231ENST00000488905 FAM45AQ8TCE6 357 aa17.26■□□□□ 0.35
HDAC6-231ENST00000488905 UTP15Q8TED0 518 aaKnown RBP17.26■□□□□ 0.35
HDAC6-231ENST00000488905 PTCHD1Q96NR3 888 aa17.26■□□□□ 0.35
HDAC6-231ENST00000488905 OSBPL9Q96SU4 736 aa17.26■□□□□ 0.35
HDAC6-231ENST00000488905 OLFM1Q99784 485 aa17.26■□□□□ 0.35
HDAC6-231ENST00000488905 SLC6A16Q9GZN6 736 aa17.26■□□□□ 0.35
HDAC6-231ENST00000488905 PLAC1Q9HBJ0 212 aa17.26■□□□□ 0.35
HDAC6-231ENST00000488905 DNAJC13O75165 2243 aa17.25■□□□□ 0.35
HDAC6-231ENST00000488905 ZNF407Q9C0G0 2248 aa17.25■□□□□ 0.35
HDAC6-231ENST00000488905 IGKV3D-11A0A0A0MRZ8 115 aa17.25■□□□□ 0.35
HDAC6-231ENST00000488905 TCRBV16S1A1N1A0A5B0 115 aa17.25■□□□□ 0.35
HDAC6-231ENST00000488905 CTAGE15A4D2H0 777 aa17.25■□□□□ 0.35
HDAC6-231ENST00000488905 ASNA1O43681 348 aa17.25■□□□□ 0.35
HDAC6-231ENST00000488905 PRMT3O60678 531 aa17.25■□□□□ 0.35
HDAC6-231ENST00000488905 CLDN14O95500 239 aa17.25■□□□□ 0.35
HDAC6-231ENST00000488905 POU3F2P20265 443 aaPredicted RBP17.25■□□□□ 0.35
HDAC6-231ENST00000488905 MAOAP21397 527 aa17.25■□□□□ 0.35
HDAC6-231ENST00000488905 CYB561P49447 251 aa17.25■□□□□ 0.35
HDAC6-231ENST00000488905 BTG2P78543 158 aa17.25■□□□□ 0.35
HDAC6-231ENST00000488905 HSF1Q00613 529 aa17.25■□□□□ 0.35
HDAC6-231ENST00000488905 PPP1R3AQ16821 1122 aa17.25■□□□□ 0.35
HDAC6-231ENST00000488905 BBS9Q3SYG4 887 aa17.25■□□□□ 0.35
HDAC6-231ENST00000488905 TEDDM1Q5T9Z0 273 aa17.25■□□□□ 0.35
HDAC6-231ENST00000488905 NCCRP1Q6ZVX7 275 aaPredicted RBP17.25■□□□□ 0.35
HDAC6-231ENST00000488905 TMPRSS11BQ86T26 416 aa17.25■□□□□ 0.35
HDAC6-231ENST00000488905 CTAGE6Q86UF2 777 aa17.25■□□□□ 0.35
HDAC6-231ENST00000488905 IGDCC3Q8IVU1 814 aa17.25■□□□□ 0.35
HDAC6-231ENST00000488905 CPSF7Q8N684 471 aaKnown RBP17.25■□□□□ 0.35
HDAC6-231ENST00000488905 ANKRD53Q8N9V6 530 aa17.25■□□□□ 0.35
HDAC6-231ENST00000488905 MTFMTQ96DP5 389 aaKnown RBP17.25■□□□□ 0.35
HDAC6-231ENST00000488905 TRIM45Q9H8W5 580 aaPredicted RBP17.25■□□□□ 0.35
HDAC6-231ENST00000488905 PELI2Q9HAT8 420 aa17.25■□□□□ 0.35
HDAC6-231ENST00000488905 GPAMQ9HCL2 828 aa17.25■□□□□ 0.35
HDAC6-231ENST00000488905 PPANQ9NQ55 473 aaKnown RBP17.25■□□□□ 0.35
HDAC6-231ENST00000488905 IKZF3Q9UKT9 509 aa17.25■□□□□ 0.35
HDAC6-231ENST00000488905 DYRK1BQ9Y463 629 aa17.25■□□□□ 0.35
HDAC6-231ENST00000488905 HIVEP1P15822 2718 aa17.24■□□□□ 0.35
HDAC6-231ENST00000488905 URADA6NGE7 173 aa17.24■□□□□ 0.35
HDAC6-231ENST00000488905 C19orf84I3L1E1 186 aa17.24■□□□□ 0.35
HDAC6-231ENST00000488905 PSMD12O00232 456 aaPredicted RBP17.24■□□□□ 0.35
HDAC6-231ENST00000488905 RNH1P13489 461 aaKnown RBP17.24■□□□□ 0.35
HDAC6-231ENST00000488905 HNF4AP41235 474 aa17.24■□□□□ 0.35
HDAC6-231ENST00000488905 ITGA8P53708 1063 aa17.24■□□□□ 0.35
HDAC6-231ENST00000488905 MLF1P58340 268 aa17.24■□□□□ 0.35
HDAC6-231ENST00000488905 RAB8AP61006 207 aa17.24■□□□□ 0.35
HDAC6-231ENST00000488905 HYAL2Q12891 473 aa17.24■□□□□ 0.35
HDAC6-231ENST00000488905 RNFT1Q5M7Z0 435 aa17.24■□□□□ 0.35
HDAC6-231ENST00000488905 ZNF227Q86WZ6 799 aa17.24■□□□□ 0.35
HDAC6-231ENST00000488905 CHERPQ8IWX8 916 aaKnown RBP17.24■□□□□ 0.35
HDAC6-231ENST00000488905 TRPV3Q8NET8 790 aa17.24■□□□□ 0.35
HDAC6-231ENST00000488905 AGAP11Q8TF27 550 aa17.24■□□□□ 0.35
HDAC6-231ENST00000488905 TMEM125Q96AQ2 219 aa17.24■□□□□ 0.35
HDAC6-231ENST00000488905 CFAP36Q96G28 342 aa17.24■□□□□ 0.35
HDAC6-231ENST00000488905 AIF1LQ9BQI0 150 aa17.24■□□□□ 0.35
HDAC6-231ENST00000488905 DDX47Q9H0S4 455 aaKnown RBP17.24■□□□□ 0.35
HDAC6-231ENST00000488905 CLK4Q9HAZ1 481 aaKnown RBP17.24■□□□□ 0.35
HDAC6-231ENST00000488905 PRDM9Q9NQV7 894 aa17.24■□□□□ 0.35
HDAC6-231ENST00000488905 CHMP2BQ9UQN3 213 aa17.24■□□□□ 0.35
HDAC6-231ENST00000488905 VWA7Q9Y334 891 aa17.24■□□□□ 0.35
HDAC6-231ENST00000488905 INTS1Q8N201 2190 aaKnown RBP17.23■□□□□ 0.35
HDAC6-231ENST00000488905 C4orf51C9J302 202 aa17.23■□□□□ 0.35
HDAC6-231ENST00000488905 FCHO1O14526 889 aa17.23■□□□□ 0.35
HDAC6-231ENST00000488905 ZNHIT1O43257 154 aa17.23■□□□□ 0.35
HDAC6-231ENST00000488905 ZNF37AP17032 561 aaPredicted RBP17.23■□□□□ 0.35
HDAC6-231ENST00000488905 TRHRP34981 398 aaPredicted RBP17.23■□□□□ 0.35
HDAC6-231ENST00000488905 HLCSP50747 726 aa17.23■□□□□ 0.35
HDAC6-231ENST00000488905 TRMT10BQ6PF06 316 aaKnown RBP17.23■□□□□ 0.35
HDAC6-231ENST00000488905 THOC6Q86W42 341 aaKnown RBP17.23■□□□□ 0.35
HDAC6-231ENST00000488905 ARMC10Q8N2F6 343 aa17.23■□□□□ 0.35
HDAC6-231ENST00000488905 SLC35F6Q8N357 371 aa17.23■□□□□ 0.35
HDAC6-231ENST00000488905 NFAM1Q8NET5 270 aaPredicted RBP17.23■□□□□ 0.35
HDAC6-231ENST00000488905 PHF10Q8WUB8 498 aaKnown RBP17.23■□□□□ 0.35
HDAC6-231ENST00000488905 SLCO2A1Q92959 643 aa17.23■□□□□ 0.35
HDAC6-231ENST00000488905 PDLIM5Q96HC4 596 aaKnown RBP17.23■□□□□ 0.35
HDAC6-231ENST00000488905 WDR83Q9BRX9 315 aaKnown RBP17.23■□□□□ 0.35
HDAC6-231ENST00000488905 NECTIN3Q9NQS3 549 aa17.23■□□□□ 0.35
HDAC6-231ENST00000488905 ASB1Q9Y576 335 aa17.23■□□□□ 0.35
HDAC6-231ENST00000488905 HCFC1P51610 2035 aa17.23■□□□□ 0.35
HDAC6-231ENST00000488905 PHF3Q92576 2039 aaKnown RBP17.23■□□□□ 0.35
HDAC6-231ENST00000488905 EML6Q6ZMW3 1958 aa17.22■□□□□ 0.35
HDAC6-231ENST00000488905 E9PLN8 166 aa17.22■□□□□ 0.35
HDAC6-231ENST00000488905 CES2O00748 559 aa17.22■□□□□ 0.35
HDAC6-231ENST00000488905 SMIM10L1P0DMW3 83 aa17.22■□□□□ 0.35
HDAC6-231ENST00000488905 ELK3P41970 407 aa17.22■□□□□ 0.35
HDAC6-231ENST00000488905 STEAP4Q687X5 459 aa17.22■□□□□ 0.35
HDAC6-231ENST00000488905 NXPE4Q6UWF7 544 aa17.22■□□□□ 0.35
HDAC6-231ENST00000488905 FGD2Q7Z6J4 655 aa17.22■□□□□ 0.35
HDAC6-231ENST00000488905 DOLPP1Q86YN1 238 aa17.22■□□□□ 0.35
HDAC6-231ENST00000488905 ZNF295-AS1Q8N0V1 137 aa17.22■□□□□ 0.35
HDAC6-231ENST00000488905 CA13Q8N1Q1 262 aa17.22■□□□□ 0.35
HDAC6-231ENST00000488905 POGLUT1Q8NBL1 392 aa17.22■□□□□ 0.35
HDAC6-231ENST00000488905 APCDD1LQ8NCL9 501 aa17.22■□□□□ 0.35
HDAC6-231ENST00000488905 ARMC2Q8NEN0 867 aa17.22■□□□□ 0.35
HDAC6-231ENST00000488905 SMIM10Q96HG1 83 aa17.22■□□□□ 0.35
HDAC6-231ENST00000488905 VKORC1Q9BQB6 163 aa17.22■□□□□ 0.35
HDAC6-231ENST00000488905 DEFB126Q9BYW3 111 aa17.22■□□□□ 0.35
HDAC6-231ENST00000488905 AICDAQ9GZX7 198 aa17.22■□□□□ 0.35
HDAC6-231ENST00000488905 RHBGQ9H310 441 aa17.22■□□□□ 0.35
HDAC6-231ENST00000488905 KLHL31Q9H511 634 aa17.22■□□□□ 0.35
HDAC6-231ENST00000488905 SNX12Q9UMY4 172 aa17.22■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms