RNA–Protein interactions for RNA: ENST00000488727.5

CCM2-216, Transcript of CCM2 scaffold protein, humanhuman

TSL 5

Gene CCM2, Length 1,719 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-216ENST00000488727 PRMT9Q6P2P2 845 aa18.49■□□□□ 0.55
CCM2-216ENST00000488727 GPRIN3Q6ZVF9 776 aa18.49■□□□□ 0.55
CCM2-216ENST00000488727 LRRC70Q7Z2Q7 622 aa18.49■□□□□ 0.55
CCM2-216ENST00000488727 BMPERQ8N8U9 685 aa18.49■□□□□ 0.55
CCM2-216ENST00000488727 DNAJC11Q9NVH1 559 aa18.49■□□□□ 0.55
CCM2-216ENST00000488727 TMEM45AQ9NWC5 275 aa18.49■□□□□ 0.55
CCM2-216ENST00000488727 SATB2Q9UPW6 733 aa18.49■□□□□ 0.55
CCM2-216ENST00000488727 TNPO3Q9Y5L0 923 aaKnown RBP18.49■□□□□ 0.55
CCM2-216ENST00000488727 OR2A25A4D2G3 310 aa18.49■□□□□ 0.55
CCM2-216ENST00000488727 EFCAB7A8K855 629 aa18.49■□□□□ 0.55
CCM2-216ENST00000488727 H7BY64 318 aa18.49■□□□□ 0.55
CCM2-216ENST00000488727 CAPNS1P04632 268 aa18.49■□□□□ 0.55
CCM2-216ENST00000488727 LINC00032P0C843 101 aa18.49■□□□□ 0.55
CCM2-216ENST00000488727 CDH1P12830 882 aa18.49■□□□□ 0.55
CCM2-216ENST00000488727 ARL4DP49703 201 aa18.49■□□□□ 0.55
CCM2-216ENST00000488727 RBBP7Q16576 425 aa18.49■□□□□ 0.55
CCM2-216ENST00000488727 SFT2D3Q587I9 215 aa18.49■□□□□ 0.55
CCM2-216ENST00000488727 CATSPEREQ5SY80 951 aa18.49■□□□□ 0.55
CCM2-216ENST00000488727 PAQR7Q86WK9 346 aa18.49■□□□□ 0.55
CCM2-216ENST00000488727 FAM129CQ86XR2 697 aa18.49■□□□□ 0.55
CCM2-216ENST00000488727 CATSPER1Q8NEC5 780 aa18.49■□□□□ 0.55
CCM2-216ENST00000488727 ZUFSPQ96AP4 578 aa18.49■□□□□ 0.55
CCM2-216ENST00000488727 MIEF2Q96C03 454 aa18.49■□□□□ 0.55
CCM2-216ENST00000488727 DUS3LQ96G46 650 aaKnown RBP18.49■□□□□ 0.55
CCM2-216ENST00000488727 TCTN2Q96GX1 697 aa18.49■□□□□ 0.55
CCM2-216ENST00000488727 PRAP1Q96NZ9 151 aa18.49■□□□□ 0.55
CCM2-216ENST00000488727 BTBD9Q96Q07 612 aa18.49■□□□□ 0.55
CCM2-216ENST00000488727 GPATCH1Q9BRR8 931 aaKnown RBP18.49■□□□□ 0.55
CCM2-216ENST00000488727 PDE7BQ9NP56 450 aa18.49■□□□□ 0.55
CCM2-216ENST00000488727 AIG1Q9NVV5 245 aa18.49■□□□□ 0.55
CCM2-216ENST00000488727 OPTCQ9UBM4 332 aa18.49■□□□□ 0.55
CCM2-216ENST00000488727 RIMS3Q9UJD0 308 aa18.49■□□□□ 0.55
CCM2-216ENST00000488727 GPR45Q9Y5Y3 372 aa18.49■□□□□ 0.55
CCM2-216ENST00000488727 E7EQ34 232 aa18.48■□□□□ 0.55
CCM2-216ENST00000488727 K7EPI3 171 aa18.48■□□□□ 0.55
CCM2-216ENST00000488727 PLD2O14939 933 aa18.48■□□□□ 0.55
CCM2-216ENST00000488727 PRAMEF4O60810 478 aa18.48■□□□□ 0.55
CCM2-216ENST00000488727 CTSVO60911 334 aa18.48■□□□□ 0.55
CCM2-216ENST00000488727 ETV5P41161 510 aa18.48■□□□□ 0.55
CCM2-216ENST00000488727 MLLT3P42568 568 aaPredicted RBP18.48■□□□□ 0.55
CCM2-216ENST00000488727 GABRA4P48169 554 aa18.48■□□□□ 0.55
CCM2-216ENST00000488727 EIF3IQ13347 325 aaKnown RBP18.48■□□□□ 0.55
CCM2-216ENST00000488727 DEFB110Q30KQ9 67 aa18.48■□□□□ 0.55
CCM2-216ENST00000488727 IRAK1BP1Q5VVH5 260 aa18.48■□□□□ 0.55
CCM2-216ENST00000488727 PRAMEF9Q5VWM5 478 aa18.48■□□□□ 0.55
CCM2-216ENST00000488727 RNF148Q8N7C7 305 aa18.48■□□□□ 0.55
CCM2-216ENST00000488727 WDR36Q8NI36 951 aaKnown RBP18.48■□□□□ 0.55
CCM2-216ENST00000488727 SLC5A11Q8WWX8 675 aa18.48■□□□□ 0.55
CCM2-216ENST00000488727 HOPXQ9BPY8 73 aaPredicted RBP18.48■□□□□ 0.55
CCM2-216ENST00000488727 CHRNA10Q9GZZ6 450 aa18.48■□□□□ 0.55
CCM2-216ENST00000488727 VCXQ9H320 206 aa18.48■□□□□ 0.55
CCM2-216ENST00000488727 ABCD2Q9UBJ2 740 aa18.48■□□□□ 0.55
CCM2-216ENST00000488727 DYRK1BQ9Y463 629 aa18.48■□□□□ 0.55
CCM2-216ENST00000488727 KCNE2Q9Y6J6 123 aa18.48■□□□□ 0.55
CCM2-216ENST00000488727 CSNK1G2P78368 415 aa18.47■□□□□ 0.55
CCM2-216ENST00000488727 FOXM1Q08050 763 aa18.47■□□□□ 0.55
CCM2-216ENST00000488727 GPR19Q15760 415 aa18.47■□□□□ 0.55
CCM2-216ENST00000488727 ADCK2Q7Z695 626 aa18.47■□□□□ 0.55
CCM2-216ENST00000488727 RETREG3Q86VR2 466 aa18.47■□□□□ 0.55
CCM2-216ENST00000488727 DNAJC22Q8N4W6 341 aa18.47■□□□□ 0.55
CCM2-216ENST00000488727 SNX31Q8N9S9 440 aa18.47■□□□□ 0.55
CCM2-216ENST00000488727 ABHD11Q8NFV4 315 aa18.47■□□□□ 0.55
CCM2-216ENST00000488727 FCRL4Q96PJ5 515 aa18.47■□□□□ 0.55
CCM2-216ENST00000488727 BRINP2Q9C0B6 783 aa18.47■□□□□ 0.55
CCM2-216ENST00000488727 SPNS1Q9H2V7 528 aa18.47■□□□□ 0.55
CCM2-216ENST00000488727 SYNPO2LQ9H987 977 aa18.47■□□□□ 0.55
CCM2-216ENST00000488727 SLC52A3Q9NQ40 469 aa18.47■□□□□ 0.55
CCM2-216ENST00000488727 RIC8BQ9NVN3 520 aa18.47■□□□□ 0.55
CCM2-216ENST00000488727 AKAP7Q9P0M2 348 aaPredicted RBP18.47■□□□□ 0.55
CCM2-216ENST00000488727 ANKMY1Q9P2S6 941 aa18.47■□□□□ 0.55
CCM2-216ENST00000488727 GIMAP2Q9UG22 337 aa18.47■□□□□ 0.55
CCM2-216ENST00000488727 PILRAQ9UKJ1 303 aa18.47■□□□□ 0.55
CCM2-216ENST00000488727 SNX7Q9UNH6 387 aa18.47■□□□□ 0.55
CCM2-216ENST00000488727 DTNAQ9Y4J8 743 aa18.47■□□□□ 0.55
CCM2-216ENST00000488727 SPTBP11277 2137 aa18.47■□□□□ 0.55
CCM2-216ENST00000488727 AKAP13Q12802 2813 aa18.46■□□□□ 0.55
CCM2-216ENST00000488727 PRORSD1PA6NEY8 169 aa18.46■□□□□ 0.55
CCM2-216ENST00000488727 NR5A2O00482 541 aa18.46■□□□□ 0.55
CCM2-216ENST00000488727 HAT1O14929 419 aa18.46■□□□□ 0.55
CCM2-216ENST00000488727 UQCRBP14927 111 aa18.46■□□□□ 0.55
CCM2-216ENST00000488727 CAPN3P20807 821 aa18.46■□□□□ 0.55
CCM2-216ENST00000488727 SPATS1Q496A3 300 aa18.46■□□□□ 0.55
CCM2-216ENST00000488727 TMEM154Q6P9G4 183 aa18.46■□□□□ 0.55
CCM2-216ENST00000488727 BLOC1S3Q6QNY0 202 aa18.46■□□□□ 0.55
CCM2-216ENST00000488727 GOLGA7Q7Z5G4 137 aa18.46■□□□□ 0.55
CCM2-216ENST00000488727 TMPRSS11BQ86T26 416 aa18.46■□□□□ 0.55
CCM2-216ENST00000488727 PLD3Q8IV08 490 aa18.46■□□□□ 0.55
CCM2-216ENST00000488727 ADCY4Q8NFM4 1077 aa18.46■□□□□ 0.55
CCM2-216ENST00000488727 PMEPA1Q969W9 287 aa18.46■□□□□ 0.55
CCM2-216ENST00000488727 LRGUKQ96M69 825 aa18.46■□□□□ 0.55
CCM2-216ENST00000488727 OR6C1Q96RD1 312 aa18.46■□□□□ 0.55
CCM2-216ENST00000488727 APMAPQ9HDC9 416 aa18.46■□□□□ 0.55
CCM2-216ENST00000488727 TMEM184CQ9NVA4 438 aa18.46■□□□□ 0.55
CCM2-216ENST00000488727 GPRC5BQ9NZH0 403 aa18.46■□□□□ 0.55
CCM2-216ENST00000488727 MAP10Q9P2G4 905 aa18.46■□□□□ 0.55
CCM2-216ENST00000488727 PISDQ9UG56 409 aa18.46■□□□□ 0.55
CCM2-216ENST00000488727 SCOCQ9UIL1 159 aa18.46■□□□□ 0.55
CCM2-216ENST00000488727 TIMM22Q9Y584 194 aa18.46■□□□□ 0.55
CCM2-216ENST00000488727 CTSBP07858 339 aa18.46■□□□□ 0.55
CCM2-216ENST00000488727 PIM1P11309 404 aaPredicted RBP18.46■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms