RNA–Protein interactions for RNA: ENST00000488558.2

CUL4A-209, Transcript of cullin 4A, humanhuman

TSL 3 BASIC

Gene CUL4A, Length 1,111 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUL4A-209ENST00000488558 PRAMEF2O60811 474 aa21.71■■□□□ 1.07
CUL4A-209ENST00000488558 H2AFYO75367 372 aaKnown RBP21.71■■□□□ 1.07
CUL4A-209ENST00000488558 B3GALT4O96024 378 aa21.71■■□□□ 1.07
CUL4A-209ENST00000488558 RNH1P13489 461 aaKnown RBP21.71■■□□□ 1.07
CUL4A-209ENST00000488558 STX2P32856 288 aa21.71■■□□□ 1.07
CUL4A-209ENST00000488558 OR4D2P58180 307 aa21.71■■□□□ 1.07
CUL4A-209ENST00000488558 SLC26A5P58743 744 aa21.71■■□□□ 1.07
CUL4A-209ENST00000488558 RAB8AP61006 207 aa21.71■■□□□ 1.07
CUL4A-209ENST00000488558 ACTN3Q08043 901 aaPredicted RBP21.71■■□□□ 1.07
CUL4A-209ENST00000488558 NAB1Q13506 487 aa21.71■■□□□ 1.07
CUL4A-209ENST00000488558 SLBPQ14493 270 aaKnown RBP eCLIP21.71■■□□□ 1.07
CUL4A-209ENST00000488558 SULT1C3Q6IMI6 304 aa21.71■■□□□ 1.07
CUL4A-209ENST00000488558 ZDHHC24Q6UX98 284 aa21.71■■□□□ 1.07
CUL4A-209ENST00000488558 GPSM1Q86YR5 675 aa21.71■■□□□ 1.07
CUL4A-209ENST00000488558 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP21.71■■□□□ 1.07
CUL4A-209ENST00000488558 LGI4Q8N135 537 aa21.71■■□□□ 1.07
CUL4A-209ENST00000488558 KRT78Q8N1N4 520 aa21.71■■□□□ 1.07
CUL4A-209ENST00000488558 NR4A3Q92570 626 aa21.71■■□□□ 1.07
CUL4A-209ENST00000488558 GAL3ST3Q96A11 431 aa21.71■■□□□ 1.07
CUL4A-209ENST00000488558 MAGEB10Q96LZ2 347 aaPredicted RBP21.71■■□□□ 1.07
CUL4A-209ENST00000488558 DNAJC11Q9NVH1 559 aa21.71■■□□□ 1.07
CUL4A-209ENST00000488558 WWOXQ9NZC7 414 aa21.71■■□□□ 1.07
CUL4A-209ENST00000488558 NCF1BA6NI72 391 aaPredicted RBP21.7■■□□□ 1.06
CUL4A-209ENST00000488558 A8MUI8 341 aa21.7■■□□□ 1.06
CUL4A-209ENST00000488558 NCF1CA8MVU1 366 aaPredicted RBP21.7■■□□□ 1.06
CUL4A-209ENST00000488558 DNAJB6O75190 326 aa21.7■■□□□ 1.06
CUL4A-209ENST00000488558 F10P00742 488 aa21.7■■□□□ 1.06
CUL4A-209ENST00000488558 NCF1P14598 390 aaPredicted RBP21.7■■□□□ 1.06
CUL4A-209ENST00000488558 HPDP32754 393 aaPredicted RBP21.7■■□□□ 1.06
CUL4A-209ENST00000488558 MAGEA4P43358 317 aa21.7■■□□□ 1.06
CUL4A-209ENST00000488558 TDGF1P3P51864 188 aa21.7■■□□□ 1.06
CUL4A-209ENST00000488558 MEP1AQ16819 746 aa21.7■■□□□ 1.06
CUL4A-209ENST00000488558 C18orf21Q32NC0 220 aaPredicted RBP21.7■■□□□ 1.06
CUL4A-209ENST00000488558 KBTBD12Q3ZCT8 623 aa21.7■■□□□ 1.06
CUL4A-209ENST00000488558 C4orf17Q53FE4 359 aa21.7■■□□□ 1.06
CUL4A-209ENST00000488558 TOR1AIP1Q5JTV8 583 aa21.7■■□□□ 1.06
CUL4A-209ENST00000488558 CTAGE3PQ8IX95 158 aa21.7■■□□□ 1.06
CUL4A-209ENST00000488558 BEST3Q8N1M1 668 aa21.7■■□□□ 1.06
CUL4A-209ENST00000488558 C17orf53Q8N3J3 647 aaPredicted RBP21.7■■□□□ 1.06
CUL4A-209ENST00000488558 SLC5A8Q8N695 610 aa21.7■■□□□ 1.06
CUL4A-209ENST00000488558 AMER2Q8N7J2 671 aa21.7■■□□□ 1.06
CUL4A-209ENST00000488558 KIAA1191Q96A73 305 aa21.7■■□□□ 1.06
CUL4A-209ENST00000488558 WDR34Q96EX3 536 aa21.7■■□□□ 1.06
CUL4A-209ENST00000488558 AICDAQ9GZX7 198 aa21.7■■□□□ 1.06
CUL4A-209ENST00000488558 KLHL31Q9H511 634 aa21.7■■□□□ 1.06
CUL4A-209ENST00000488558 IGKV3D-11A0A0A0MRZ8 115 aa21.69■■□□□ 1.06
CUL4A-209ENST00000488558 C4orf51C9J302 202 aa21.69■■□□□ 1.06
CUL4A-209ENST00000488558 PSMD12O00232 456 aaPredicted RBP21.69■■□□□ 1.06
CUL4A-209ENST00000488558 TAPBPO15533 448 aa21.69■■□□□ 1.06
CUL4A-209ENST00000488558 PRMT3O60678 531 aa21.69■■□□□ 1.06
CUL4A-209ENST00000488558 CLEC3AO75596 197 aa21.69■■□□□ 1.06
CUL4A-209ENST00000488558 CRYABP02511 175 aaKnown RBP21.69■■□□□ 1.06
CUL4A-209ENST00000488558 HNF4AP41235 474 aa21.69■■□□□ 1.06
CUL4A-209ENST00000488558 TAS2R50P59544 299 aa21.69■■□□□ 1.06
CUL4A-209ENST00000488558 CKAP4Q07065 602 aaKnown RBP21.69■■□□□ 1.06
CUL4A-209ENST00000488558 OR4D1Q15615 310 aa21.69■■□□□ 1.06
CUL4A-209ENST00000488558 CCDC25Q86WR0 208 aa21.69■■□□□ 1.06
CUL4A-209ENST00000488558 CRLF3Q8IUI8 442 aa21.69■■□□□ 1.06
CUL4A-209ENST00000488558 CA13Q8N1Q1 262 aa21.69■■□□□ 1.06
CUL4A-209ENST00000488558 SPATA6LQ8N4H0 392 aa21.69■■□□□ 1.06
CUL4A-209ENST00000488558 DNAJB8Q8NHS0 232 aa21.69■■□□□ 1.06
CUL4A-209ENST00000488558 PTCHD1Q96NR3 888 aa21.69■■□□□ 1.06
CUL4A-209ENST00000488558 NPLQ9BXD5 320 aaPredicted RBP21.69■■□□□ 1.06
CUL4A-209ENST00000488558 UNKQ9C0B0 810 aaKnown RBP21.69■■□□□ 1.06
CUL4A-209ENST00000488558 PRDM9Q9NQV7 894 aa21.69■■□□□ 1.06
CUL4A-209ENST00000488558 UNC79Q9P2D8 2635 aa21.68■■□□□ 1.06
CUL4A-209ENST00000488558 TCRBV16S1A1N1A0A5B0 115 aa21.68■■□□□ 1.06
CUL4A-209ENST00000488558 B4GALT2O60909 372 aa21.68■■□□□ 1.06
CUL4A-209ENST00000488558 STK16O75716 305 aa21.68■■□□□ 1.06
CUL4A-209ENST00000488558 RASAL1O95294 804 aa21.68■■□□□ 1.06
CUL4A-209ENST00000488558 GUCY2DQ02846 1103 aa21.68■■□□□ 1.06
CUL4A-209ENST00000488558 ADPRMQ3LIE5 342 aa21.68■■□□□ 1.06
CUL4A-209ENST00000488558 PPM1NQ8N819 430 aa21.68■■□□□ 1.06
CUL4A-209ENST00000488558 ELP5Q8TE02 316 aa21.68■■□□□ 1.06
CUL4A-209ENST00000488558 MS4A6EQ96DS6 147 aa21.68■■□□□ 1.06
CUL4A-209ENST00000488558 PTCD3Q96EY7 689 aaKnown RBP21.68■■□□□ 1.06
CUL4A-209ENST00000488558 FAR2Q96K12 515 aa21.68■■□□□ 1.06
CUL4A-209ENST00000488558 NPAS2Q99743 824 aa21.68■■□□□ 1.06
CUL4A-209ENST00000488558 EFCAB11Q9BUY7 163 aa21.68■■□□□ 1.06
CUL4A-209ENST00000488558 PTBP2Q9UKA9 531 aaKnown RBP21.68■■□□□ 1.06
CUL4A-209ENST00000488558 MMACHCQ9Y4U1 282 aa21.68■■□□□ 1.06
CUL4A-209ENST00000488558 A0A088AWK7 358 aa21.67■■□□□ 1.06
CUL4A-209ENST00000488558 LRIT2A6NDA9 550 aa21.67■■□□□ 1.06
CUL4A-209ENST00000488558 SAGE2PA6NJ88 616 aa21.67■■□□□ 1.06
CUL4A-209ENST00000488558 CLGNO14967 610 aa21.67■■□□□ 1.06
CUL4A-209ENST00000488558 STSP08842 583 aa21.67■■□□□ 1.06
CUL4A-209ENST00000488558 ZNF10P21506 573 aaPredicted RBP21.67■■□□□ 1.06
CUL4A-209ENST00000488558 HNRNPH1P31943 449 aaKnown RBP21.67■■□□□ 1.06
CUL4A-209ENST00000488558 HSPA7P48741 367 aa21.67■■□□□ 1.06
CUL4A-209ENST00000488558 PER3P56645 1201 aa21.67■■□□□ 1.06
CUL4A-209ENST00000488558 TUBA3CQ13748 450 aa21.67■■□□□ 1.06
CUL4A-209ENST00000488558 PDK4Q16654 411 aa21.67■■□□□ 1.06
CUL4A-209ENST00000488558 TUBA3EQ6PEY2 450 aa21.67■■□□□ 1.06
CUL4A-209ENST00000488558 MAMDC2Q7Z304 686 aaPredicted RBP21.67■■□□□ 1.06
CUL4A-209ENST00000488558 MDS2Q8NDY4 140 aa21.67■■□□□ 1.06
CUL4A-209ENST00000488558 ARMC2Q8NEN0 867 aa21.67■■□□□ 1.06
CUL4A-209ENST00000488558 ADAMTS18Q8TE60 1221 aa21.67■■□□□ 1.06
CUL4A-209ENST00000488558 FBF1Q8TES7 1133 aa21.67■■□□□ 1.06
CUL4A-209ENST00000488558 CD274Q9NZQ7 290 aa21.67■■□□□ 1.06
CUL4A-209ENST00000488558 RNF112Q9ULX5 631 aa21.67■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms