RNA–Protein interactions for RNA: ENST00000488454.5

SKA1-204, Transcript of spindle and kinetochore associated complex subunit 1, humanhuman

TSL 3 BASIC

Gene SKA1, Length 669 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA1-204ENST00000488454 ITM2AO43736 263 aa9.79□□□□□ -0.84
SKA1-204ENST00000488454 TIAF1O95411 115 aa9.79□□□□□ -0.84
SKA1-204ENST00000488454 PDYNP01213 254 aa9.79□□□□□ -0.84
SKA1-204ENST00000488454 IL2RAP01589 272 aa9.79□□□□□ -0.84
SKA1-204ENST00000488454 CHRNGP07510 517 aa9.79□□□□□ -0.84
SKA1-204ENST00000488454 RAP1GDS1P52306 607 aa9.79□□□□□ -0.84
SKA1-204ENST00000488454 RPS13P62277 151 aaKnown RBP9.79□□□□□ -0.84
SKA1-204ENST00000488454 DCDP81605 110 aaKnown RBP9.79□□□□□ -0.84
SKA1-204ENST00000488454 ABHD18Q0P651 414 aa9.79□□□□□ -0.84
SKA1-204ENST00000488454 BST1Q10588 318 aa9.79□□□□□ -0.84
SKA1-204ENST00000488454 FAM53BQ14153 422 aa9.79□□□□□ -0.84
SKA1-204ENST00000488454 HERC3Q15034 1050 aa9.79□□□□□ -0.84
SKA1-204ENST00000488454 IMPG1Q17R60 797 aa9.79□□□□□ -0.84
SKA1-204ENST00000488454 C1orf189Q5VU69 101 aa9.79□□□□□ -0.84
SKA1-204ENST00000488454 RHBDD2Q6NTF9 364 aa9.79□□□□□ -0.84
SKA1-204ENST00000488454 TMEM214Q6NUQ4 689 aaKnown RBP9.79□□□□□ -0.84
SKA1-204ENST00000488454 PRMT9Q6P2P2 845 aa9.79□□□□□ -0.84
SKA1-204ENST00000488454 TRIM40Q6P9F5 258 aa9.79□□□□□ -0.84
SKA1-204ENST00000488454 C6orf15Q6UXA7 325 aaPredicted RBP9.79□□□□□ -0.84
SKA1-204ENST00000488454 PRICKLE2Q7Z3G6 844 aa9.79□□□□□ -0.84
SKA1-204ENST00000488454 GBP7Q8N8V2 638 aaPredicted RBP9.79□□□□□ -0.84
SKA1-204ENST00000488454 ZCCHC10Q8TBK6 192 aa9.79□□□□□ -0.84
SKA1-204ENST00000488454 WDR20Q8TBZ3 569 aa9.79□□□□□ -0.84
SKA1-204ENST00000488454 PROKR1Q8TCW9 393 aa9.79□□□□□ -0.84
SKA1-204ENST00000488454 AGR3Q8TD06 166 aa9.79□□□□□ -0.84
SKA1-204ENST00000488454 PMEPA1Q969W9 287 aa9.79□□□□□ -0.84
SKA1-204ENST00000488454 RGMAQ96B86 450 aa9.79□□□□□ -0.84
SKA1-204ENST00000488454 MVB12AQ96EY5 273 aa9.79□□□□□ -0.84
SKA1-204ENST00000488454 SERPINI1Q99574 410 aa9.79□□□□□ -0.84
SKA1-204ENST00000488454 C17orf62Q9BQA9 187 aa9.79□□□□□ -0.84
SKA1-204ENST00000488454 DPH2Q9BQC3 489 aaPredicted RBP9.79□□□□□ -0.84
SKA1-204ENST00000488454 REXO4Q9GZR2 422 aaKnown RBP9.79□□□□□ -0.84
SKA1-204ENST00000488454 BRF2Q9HAW0 419 aa9.79□□□□□ -0.84
SKA1-204ENST00000488454 DMRT3Q9NQL9 472 aa9.79□□□□□ -0.84
SKA1-204ENST00000488454 FOXJ2Q9P0K8 574 aa9.79□□□□□ -0.84
SKA1-204ENST00000488454 DHCR7Q9UBM7 475 aaKnown RBP9.79□□□□□ -0.84
SKA1-204ENST00000488454 ZNF225Q9UK10 706 aa9.79□□□□□ -0.84
SKA1-204ENST00000488454 PADI1Q9ULC6 663 aa9.79□□□□□ -0.84
SKA1-204ENST00000488454 RAP2CQ9Y3L5 183 aa9.79□□□□□ -0.84
SKA1-204ENST00000488454 SLC22A7Q9Y694 548 aa9.79□□□□□ -0.84
SKA1-204ENST00000488454 A0A1B0GX78 115 aa9.78□□□□□ -0.84
SKA1-204ENST00000488454 MAGEB17A8MXT2 336 aa9.78□□□□□ -0.84
SKA1-204ENST00000488454 H3BMH7 237 aa9.78□□□□□ -0.84
SKA1-204ENST00000488454 SLC28A1O00337 649 aa9.78□□□□□ -0.84
SKA1-204ENST00000488454 KLF11O14901 512 aa9.78□□□□□ -0.84
SKA1-204ENST00000488454 DSCR3O14972 297 aa9.78□□□□□ -0.84
SKA1-204ENST00000488454 ERI3O43414 337 aaKnown RBP9.78□□□□□ -0.84
SKA1-204ENST00000488454 WIPF1O43516 503 aa9.78□□□□□ -0.84
SKA1-204ENST00000488454 SH3BGRLO75368 114 aa9.78□□□□□ -0.84
SKA1-204ENST00000488454 LYPLA1O75608 230 aaPredicted RBP9.78□□□□□ -0.84
SKA1-204ENST00000488454 ZNF888P0CJ79 500 aaPredicted RBP9.78□□□□□ -0.84
SKA1-204ENST00000488454 VSIG8P0DPA2 414 aa9.78□□□□□ -0.84
SKA1-204ENST00000488454 HSD3B1P14060 373 aa9.78□□□□□ -0.84
SKA1-204ENST00000488454 ZNF28P17035 718 aa9.78□□□□□ -0.84
SKA1-204ENST00000488454 ALOX12P18054 663 aa9.78□□□□□ -0.84
SKA1-204ENST00000488454 HSD3B2P26439 372 aa9.78□□□□□ -0.84
SKA1-204ENST00000488454 SERPINB3P29508 390 aa9.78□□□□□ -0.84
SKA1-204ENST00000488454 RPL14P50914 215 aaKnown RBP9.78□□□□□ -0.84
SKA1-204ENST00000488454 PLA2G16P53816 162 aa9.78□□□□□ -0.84
SKA1-204ENST00000488454 RAB8AP61006 207 aa9.78□□□□□ -0.84
SKA1-204ENST00000488454 BTN3A2P78410 334 aa9.78□□□□□ -0.84
SKA1-204ENST00000488454 CUL3Q13618 768 aa9.78□□□□□ -0.84
SKA1-204ENST00000488454 MAP7Q14244 749 aa9.78□□□□□ -0.84
SKA1-204ENST00000488454 AP5B1Q2VPB7 878 aa9.78□□□□□ -0.84
SKA1-204ENST00000488454 TBC1D25Q3MII6 688 aa9.78□□□□□ -0.84
SKA1-204ENST00000488454 DEPDC1Q5TB30 811 aa9.78□□□□□ -0.84
SKA1-204ENST00000488454 KHDRBS2Q5VWX1 349 aaKnown RBP9.78□□□□□ -0.84
SKA1-204ENST00000488454 CLEC6AQ6EIG7 209 aa9.78□□□□□ -0.84
SKA1-204ENST00000488454 ADNP2Q6IQ32 1131 aa9.78□□□□□ -0.84
SKA1-204ENST00000488454 VN1R5Q7Z5H4 357 aa9.78□□□□□ -0.84
SKA1-204ENST00000488454 ZFAND4Q86XD8 727 aa9.78□□□□□ -0.84
SKA1-204ENST00000488454 CRLF3Q8IUI8 442 aa9.78□□□□□ -0.84
SKA1-204ENST00000488454 DDIASQ8IXT1 998 aa9.78□□□□□ -0.84
SKA1-204ENST00000488454 NLGN4XQ8N0W4 816 aa9.78□□□□□ -0.84
SKA1-204ENST00000488454 ESX1Q8N693 406 aa9.78□□□□□ -0.84
SKA1-204ENST00000488454 GALNT6Q8NCL4 622 aa9.78□□□□□ -0.84
SKA1-204ENST00000488454 NLGN4YQ8NFZ3 816 aaPredicted RBP9.78□□□□□ -0.84
SKA1-204ENST00000488454 OR2L5Q8NG80 312 aa9.78□□□□□ -0.84
SKA1-204ENST00000488454 UTP15Q8TED0 518 aaKnown RBP9.78□□□□□ -0.84
SKA1-204ENST00000488454 CKAP2Q8WWK9 683 aa9.78□□□□□ -0.84
SKA1-204ENST00000488454 FGF11Q92914 225 aa9.78□□□□□ -0.84
SKA1-204ENST00000488454 MR1Q95460 341 aa9.78□□□□□ -0.84
SKA1-204ENST00000488454 GAL3ST3Q96A11 431 aa9.78□□□□□ -0.84
SKA1-204ENST00000488454 COL26A1Q96A83 441 aa9.78□□□□□ -0.84
SKA1-204ENST00000488454 MS4A6EQ96DS6 147 aa9.78□□□□□ -0.84
SKA1-204ENST00000488454 RNF31Q96EP0 1072 aa9.78□□□□□ -0.84
SKA1-204ENST00000488454 MMABQ96EY8 250 aaPredicted RBP9.78□□□□□ -0.84
SKA1-204ENST00000488454 MAGEB18Q96M61 343 aa9.78□□□□□ -0.84
SKA1-204ENST00000488454 LRFN5Q96NI6 719 aa9.78□□□□□ -0.84
SKA1-204ENST00000488454 KCNC2Q96PR1 638 aa9.78□□□□□ -0.84
SKA1-204ENST00000488454 F2RL3Q96RI0 385 aa9.78□□□□□ -0.84
SKA1-204ENST00000488454 KCNA7Q96RP8 456 aa9.78□□□□□ -0.84
SKA1-204ENST00000488454 CCT7Q99832 543 aa9.78□□□□□ -0.84
SKA1-204ENST00000488454 YIPF2Q9BWQ6 316 aa9.78□□□□□ -0.84
SKA1-204ENST00000488454 MS4A8Q9BY19 250 aa9.78□□□□□ -0.84
SKA1-204ENST00000488454 GRIP2Q9C0E4 1043 aa9.78□□□□□ -0.84
SKA1-204ENST00000488454 ROGDIQ9GZN7 287 aa9.78□□□□□ -0.84
SKA1-204ENST00000488454 OR51B5Q9H339 312 aa9.78□□□□□ -0.84
SKA1-204ENST00000488454 KLHL31Q9H511 634 aa9.78□□□□□ -0.84
SKA1-204ENST00000488454 CCDC86Q9H6F5 360 aaKnown RBP9.78□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms