RNA–Protein interactions for RNA: ENST00000488317.1

SRRM1-215, Transcript of serine and arginine repetitive matrix 1, humanhuman

TSL 2

Gene SRRM1, Length 333 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM1-215ENST00000488317 PRKAR2BP31323 418 aa4.28□□□□□ -1.72
SRRM1-215ENST00000488317 SMSP52788 366 aa4.28□□□□□ -1.72
SRRM1-215ENST00000488317 LBX1P52954 281 aa4.28□□□□□ -1.72
SRRM1-215ENST00000488317 CDR2Q01850 454 aa4.28□□□□□ -1.72
SRRM1-215ENST00000488317 GFPT1Q06210 699 aaPredicted RBP4.28□□□□□ -1.72
SRRM1-215ENST00000488317 SLC34A1Q06495 639 aa4.28□□□□□ -1.72
SRRM1-215ENST00000488317 ACKR1Q16570 336 aa4.28□□□□□ -1.72
SRRM1-215ENST00000488317 HFEQ30201 348 aa4.28□□□□□ -1.72
SRRM1-215ENST00000488317 GPR33Q49SQ1 333 aa4.28□□□□□ -1.72
SRRM1-215ENST00000488317 ZNF542PQ5EBM4 170 aa4.28□□□□□ -1.72
SRRM1-215ENST00000488317 SLC25A53Q5H9E4 307 aa4.28□□□□□ -1.72
SRRM1-215ENST00000488317 WBP2NLQ6ICG8 309 aa4.28□□□□□ -1.72
SRRM1-215ENST00000488317 MARK2Q7KZI7 788 aaKnown RBP4.28□□□□□ -1.72
SRRM1-215ENST00000488317 SLC26A9Q7LBE3 791 aa4.28□□□□□ -1.72
SRRM1-215ENST00000488317 GPR141Q7Z602 305 aa4.28□□□□□ -1.72
SRRM1-215ENST00000488317 PRUNE1Q86TP1 453 aa4.28□□□□□ -1.72
SRRM1-215ENST00000488317 RCOR2Q8IZ40 523 aa4.28□□□□□ -1.72
SRRM1-215ENST00000488317 PRSS35Q8N3Z0 413 aa4.28□□□□□ -1.72
SRRM1-215ENST00000488317 ZNF843Q8N446 348 aa4.28□□□□□ -1.72
SRRM1-215ENST00000488317 RTL3Q8N8U3 475 aaKnown RBP4.28□□□□□ -1.72
SRRM1-215ENST00000488317 LRTM2Q8N967 370 aa4.28□□□□□ -1.72
SRRM1-215ENST00000488317 BCL2L2Q92843 193 aaPredicted RBP4.28□□□□□ -1.72
SRRM1-215ENST00000488317 CFAP36Q96G28 342 aa4.28□□□□□ -1.72
SRRM1-215ENST00000488317 CDHR1Q96JP9 859 aa4.28□□□□□ -1.72
SRRM1-215ENST00000488317 ALKBH7Q9BT30 221 aaPredicted RBP4.28□□□□□ -1.72
SRRM1-215ENST00000488317 CCDC94Q9BW85 323 aaPredicted RBP4.28□□□□□ -1.72
SRRM1-215ENST00000488317 SLC39A8Q9C0K1 460 aa4.28□□□□□ -1.72
SRRM1-215ENST00000488317 SHARPINQ9H0F6 387 aa4.28□□□□□ -1.72
SRRM1-215ENST00000488317 TSPY26PQ9H489 355 aa4.28□□□□□ -1.72
SRRM1-215ENST00000488317 ZFP57Q9NU63 452 aa4.28□□□□□ -1.72
SRRM1-215ENST00000488317 AGTPBP1Q9UPW5 1226 aa4.28□□□□□ -1.72
SRRM1-215ENST00000488317 COLEC10Q9Y6Z7 277 aa4.28□□□□□ -1.72
SRRM1-215ENST00000488317 PEAK1Q9H792 1746 aa4.28□□□□□ -1.72
SRRM1-215ENST00000488317 CACNA1IQ9P0X4 2223 aa4.27□□□□□ -1.73
SRRM1-215ENST00000488317 MSH6P52701 1360 aa4.27□□□□□ -1.73
SRRM1-215ENST00000488317 CEP170BQ9Y4F5 1589 aaPredicted RBP4.27□□□□□ -1.73
SRRM1-215ENST00000488317 KDM3BQ7LBC6 1761 aa4.27□□□□□ -1.73
SRRM1-215ENST00000488317 VEGFDO43915 354 aa4.27□□□□□ -1.73
SRRM1-215ENST00000488317 ACSL4O60488 711 aa4.27□□□□□ -1.73
SRRM1-215ENST00000488317 DFFBO76075 338 aa4.27□□□□□ -1.73
SRRM1-215ENST00000488317 NGFP01138 241 aa4.27□□□□□ -1.73
SRRM1-215ENST00000488317 EDN1P05305 212 aa4.27□□□□□ -1.73
SRRM1-215ENST00000488317 PRSS1P07477 247 aa4.27□□□□□ -1.73
SRRM1-215ENST00000488317 GOT1P17174 413 aa4.27□□□□□ -1.73
SRRM1-215ENST00000488317 DUTP33316 252 aaKnown RBP4.27□□□□□ -1.73
SRRM1-215ENST00000488317 DNA2P51530 1060 aa4.27□□□□□ -1.73
SRRM1-215ENST00000488317 UCP2P55851 309 aa4.27□□□□□ -1.73
SRRM1-215ENST00000488317 YBEYP58557 167 aaPredicted RBP4.27□□□□□ -1.73
SRRM1-215ENST00000488317 ERVFC1-1P60608 527 aa4.27□□□□□ -1.73
SRRM1-215ENST00000488317 KCNJ10P78508 379 aa4.27□□□□□ -1.73
SRRM1-215ENST00000488317 MYL7Q01449 175 aa4.27□□□□□ -1.73
SRRM1-215ENST00000488317 RBM39Q14498 530 aaKnown RBP4.27□□□□□ -1.73
SRRM1-215ENST00000488317 ZC2HC1CQ53FD0 456 aaPredicted RBP4.27□□□□□ -1.73
SRRM1-215ENST00000488317 ARHGEF16Q5VV41 709 aa4.27□□□□□ -1.73
SRRM1-215ENST00000488317 KCTD11Q693B1 232 aa4.27□□□□□ -1.73
SRRM1-215ENST00000488317 UGT3A1Q6NUS8 523 aa4.27□□□□□ -1.73
SRRM1-215ENST00000488317 CNSTQ6PJW8 725 aa4.27□□□□□ -1.73
SRRM1-215ENST00000488317 RBMS3Q6XE24 437 aaKnown RBP4.27□□□□□ -1.73
SRRM1-215ENST00000488317 SIGLEC15Q6ZMC9 328 aa4.27□□□□□ -1.73
SRRM1-215ENST00000488317 SLC16A9Q7RTY1 509 aa4.27□□□□□ -1.73
SRRM1-215ENST00000488317 PRSS42Q7Z5A4 293 aa4.27□□□□□ -1.73
SRRM1-215ENST00000488317 RABEPKQ7Z6M1 372 aa4.27□□□□□ -1.73
SRRM1-215ENST00000488317 TMEM126BQ8IUX1 230 aa4.27□□□□□ -1.73
SRRM1-215ENST00000488317 SERPINA12Q8IW75 414 aa4.27□□□□□ -1.73
SRRM1-215ENST00000488317 CCDC60Q8IWA6 550 aaPredicted RBP4.27□□□□□ -1.73
SRRM1-215ENST00000488317 CIARTQ8N365 385 aaPredicted RBP4.27□□□□□ -1.73
SRRM1-215ENST00000488317 RFLNBQ8N5W9 214 aa4.27□□□□□ -1.73
SRRM1-215ENST00000488317 GBP7Q8N8V2 638 aaPredicted RBP4.27□□□□□ -1.73
SRRM1-215ENST00000488317 Q8N9P0 234 aaPredicted RBP4.27□□□□□ -1.73
SRRM1-215ENST00000488317 SMYD1Q8NB12 490 aa4.27□□□□□ -1.73
SRRM1-215ENST00000488317 FCAMRQ8WWV6 532 aa4.27□□□□□ -1.73
SRRM1-215ENST00000488317 PIBF1Q8WXW3 757 aa4.27□□□□□ -1.73
SRRM1-215ENST00000488317 PIK3R3Q92569 461 aa4.27□□□□□ -1.73
SRRM1-215ENST00000488317 RFT1Q96AA3 541 aa4.27□□□□□ -1.73
SRRM1-215ENST00000488317 RBM41Q96IZ5 413 aaKnown RBP4.27□□□□□ -1.73
SRRM1-215ENST00000488317 C4orf45Q96LM5 186 aa4.27□□□□□ -1.73
SRRM1-215ENST00000488317 CDCA3Q99618 268 aaPredicted RBP4.27□□□□□ -1.73
SRRM1-215ENST00000488317 KRTAP4-9Q9BYQ8 210 aa4.27□□□□□ -1.73
SRRM1-215ENST00000488317 P2RY12Q9H244 342 aa4.27□□□□□ -1.73
SRRM1-215ENST00000488317 TNMDQ9H2S6 317 aa4.27□□□□□ -1.73
SRRM1-215ENST00000488317 RAVER2Q9HCJ3 691 aaKnown RBP4.27□□□□□ -1.73
SRRM1-215ENST00000488317 GPR173Q9NS66 373 aa4.27□□□□□ -1.73
SRRM1-215ENST00000488317 INTS9Q9NV88 658 aaKnown RBP4.27□□□□□ -1.73
SRRM1-215ENST00000488317 DNAJC11Q9NVH1 559 aa4.27□□□□□ -1.73
SRRM1-215ENST00000488317 ZKSCAN7Q9P0L1 754 aaPredicted RBP4.27□□□□□ -1.73
SRRM1-215ENST00000488317 FETUBQ9UGM5 382 aa4.27□□□□□ -1.73
SRRM1-215ENST00000488317 MAD2L2Q9UI95 211 aa4.27□□□□□ -1.73
SRRM1-215ENST00000488317 PRDM4Q9UKN5 801 aa4.27□□□□□ -1.73
SRRM1-215ENST00000488317 EXOC6BQ9Y2D4 811 aa4.27□□□□□ -1.73
SRRM1-215ENST00000488317 TDRKHQ9Y2W6 561 aaKnown RBP4.27□□□□□ -1.73
SRRM1-215ENST00000488317 ADGRL3Q9HAR2 1447 aa4.27□□□□□ -1.73
SRRM1-215ENST00000488317 MED1Q15648 1581 aaPredicted RBP4.27□□□□□ -1.73
SRRM1-215ENST00000488317 RPAP1Q9BWH6 1393 aaPredicted RBP4.27□□□□□ -1.73
SRRM1-215ENST00000488317 MARF1Q9Y4F3 1742 aaKnown RBP4.26□□□□□ -1.73
SRRM1-215ENST00000488317 PFASO15067 1338 aa4.26□□□□□ -1.73
SRRM1-215ENST00000488317 A2ML1A8K2U0 1454 aa4.26□□□□□ -1.73
SRRM1-215ENST00000488317 A0A087X0K7 114 aa4.26□□□□□ -1.73
SRRM1-215ENST00000488317 A0A0G2JLW4 131 aa4.26□□□□□ -1.73
SRRM1-215ENST00000488317 TRBV5-5A0A0J9YX44 114 aa4.26□□□□□ -1.73
SRRM1-215ENST00000488317 MAGEB16A2A368 324 aa4.26□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms