RNA–Protein interactions for RNA: ENST00000488106.1

RHBDD3-205, Transcript of rhomboid domain containing 3, humanhuman

TSL 5

Gene RHBDD3, Length 640 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDD3-205ENST00000488106 GAL3ST3Q96A11 431 aa22.35■■□□□ 1.17
RHBDD3-205ENST00000488106 MTBPQ96DY7 904 aa22.35■■□□□ 1.17
RHBDD3-205ENST00000488106 SMAD5Q99717 465 aaKnown RBP22.35■■□□□ 1.17
RHBDD3-205ENST00000488106 EPN3Q9H201 632 aa22.35■■□□□ 1.17
RHBDD3-205ENST00000488106 IGHV1-45A0A0A0MS14 117 aa22.34■■□□□ 1.17
RHBDD3-205ENST00000488106 ERI3O43414 337 aaKnown RBP22.34■■□□□ 1.17
RHBDD3-205ENST00000488106 CLEC3AO75596 197 aa22.34■■□□□ 1.17
RHBDD3-205ENST00000488106 ALPPP05187 535 aa22.34■■□□□ 1.17
RHBDD3-205ENST00000488106 PCNAP12004 261 aa22.34■■□□□ 1.17
RHBDD3-205ENST00000488106 COL6A2P12110 1019 aa22.34■■□□□ 1.17
RHBDD3-205ENST00000488106 Q0VFX4 171 aa22.34■■□□□ 1.17
RHBDD3-205ENST00000488106 NADK2Q4G0N4 442 aa22.34■■□□□ 1.17
RHBDD3-205ENST00000488106 IRAK1BP1Q5VVH5 260 aa22.34■■□□□ 1.17
RHBDD3-205ENST00000488106 NDUFAF7Q7L592 441 aa22.34■■□□□ 1.17
RHBDD3-205ENST00000488106 MS4A6EQ96DS6 147 aa22.34■■□□□ 1.17
RHBDD3-205ENST00000488106 PHF21BQ96EK2 531 aa22.34■■□□□ 1.17
RHBDD3-205ENST00000488106 THOC3Q96J01 351 aaKnown RBP22.34■■□□□ 1.17
RHBDD3-205ENST00000488106 FAR2Q96K12 515 aa22.34■■□□□ 1.17
RHBDD3-205ENST00000488106 OR1F2PQ96R84 312 aa22.34■■□□□ 1.17
RHBDD3-205ENST00000488106 RHBGQ9H310 441 aa22.34■■□□□ 1.17
RHBDD3-205ENST00000488106 ZNF552Q9H707 407 aaPredicted RBP22.34■■□□□ 1.17
RHBDD3-205ENST00000488106 TBK1Q9UHD2 729 aa22.34■■□□□ 1.17
RHBDD3-205ENST00000488106 PCDHGB7Q9Y5F8 929 aa22.34■■□□□ 1.17
RHBDD3-205ENST00000488106 IQANK1A0A1B0GTG1 560 aa22.33■■□□□ 1.17
RHBDD3-205ENST00000488106 LRIT2A6NDA9 550 aa22.33■■□□□ 1.17
RHBDD3-205ENST00000488106 SMIM24O75264 130 aa22.33■■□□□ 1.17
RHBDD3-205ENST00000488106 WFS1O76024 890 aa22.33■■□□□ 1.17
RHBDD3-205ENST00000488106 FHP07954 510 aa22.33■■□□□ 1.17
RHBDD3-205ENST00000488106 SMIM10L1P0DMW3 83 aa22.33■■□□□ 1.17
RHBDD3-205ENST00000488106 EEF1DP29692 281 aaKnown RBP22.33■■□□□ 1.17
RHBDD3-205ENST00000488106 CASRP41180 1078 aa22.33■■□□□ 1.17
RHBDD3-205ENST00000488106 SOX8P57073 446 aa22.33■■□□□ 1.17
RHBDD3-205ENST00000488106 BTN3A2P78410 334 aa22.33■■□□□ 1.17
RHBDD3-205ENST00000488106 GTF2H2Q13888 395 aa22.33■■□□□ 1.17
RHBDD3-205ENST00000488106 PCBP2Q15366 365 aaKnown RBP eCLIP22.33■■□□□ 1.17
RHBDD3-205ENST00000488106 GTF2H2CQ6P1K8 395 aa22.33■■□□□ 1.17
RHBDD3-205ENST00000488106 MED27Q6P2C8 311 aa22.33■■□□□ 1.17
RHBDD3-205ENST00000488106 TMEM205Q6UW68 189 aa22.33■■□□□ 1.17
RHBDD3-205ENST00000488106 GOLGA7Q7Z5G4 137 aa22.33■■□□□ 1.17
RHBDD3-205ENST00000488106 TBC1D20Q96BZ9 403 aa22.33■■□□□ 1.17
RHBDD3-205ENST00000488106 SMIM10Q96HG1 83 aa22.33■■□□□ 1.17
RHBDD3-205ENST00000488106 SEC16BQ96JE7 1060 aa22.33■■□□□ 1.17
RHBDD3-205ENST00000488106 CCDC77Q9BR77 488 aa22.33■■□□□ 1.17
RHBDD3-205ENST00000488106 MFRPQ9BY79 579 aa22.33■■□□□ 1.17
RHBDD3-205ENST00000488106 REXO4Q9GZR2 422 aaKnown RBP22.33■■□□□ 1.17
RHBDD3-205ENST00000488106 LANCL2Q9NS86 450 aa22.33■■□□□ 1.17
RHBDD3-205ENST00000488106 FETUBQ9UGM5 382 aa22.33■■□□□ 1.17
RHBDD3-205ENST00000488106 LOC102723996A0A087X1L8 192 aa22.32■■□□□ 1.16
RHBDD3-205ENST00000488106 IGHV3-20A0A0C4DH32 117 aa22.32■■□□□ 1.16
RHBDD3-205ENST00000488106 GOLGA8RI6L899 631 aa22.32■■□□□ 1.16
RHBDD3-205ENST00000488106 PCDH17O14917 1159 aa22.32■■□□□ 1.16
RHBDD3-205ENST00000488106 DPM1O60762 260 aa22.32■■□□□ 1.16
RHBDD3-205ENST00000488106 TBX6O95947 436 aaPredicted RBP22.32■■□□□ 1.16
RHBDD3-205ENST00000488106 SHBGP04278 402 aa22.32■■□□□ 1.16
RHBDD3-205ENST00000488106 ARL1P40616 181 aaPredicted RBP22.32■■□□□ 1.16
RHBDD3-205ENST00000488106 CASP2P42575 452 aa22.32■■□□□ 1.16
RHBDD3-205ENST00000488106 PLA2G16P53816 162 aa22.32■■□□□ 1.16
RHBDD3-205ENST00000488106 TLE1Q04724 770 aa22.32■■□□□ 1.16
RHBDD3-205ENST00000488106 E2F2Q14209 437 aa22.32■■□□□ 1.16
RHBDD3-205ENST00000488106 ABRAXAS2Q15018 415 aa22.32■■□□□ 1.16
RHBDD3-205ENST00000488106 PCOLCEQ15113 449 aa22.32■■□□□ 1.16
RHBDD3-205ENST00000488106 GRHL2Q6ISB3 625 aa22.32■■□□□ 1.16
RHBDD3-205ENST00000488106 TRIM40Q6P9F5 258 aa22.32■■□□□ 1.16
RHBDD3-205ENST00000488106 UBE2E3Q969T4 207 aa22.32■■□□□ 1.16
RHBDD3-205ENST00000488106 MRPL57Q9BQC6 102 aaKnown RBP22.32■■□□□ 1.16
RHBDD3-205ENST00000488106 LHPPQ9H008 270 aa22.32■■□□□ 1.16
RHBDD3-205ENST00000488106 MRPL46Q9H2W6 279 aaKnown RBP22.32■■□□□ 1.16
RHBDD3-205ENST00000488106 ACTR8Q9H981 624 aa22.32■■□□□ 1.16
RHBDD3-205ENST00000488106 RIC8BQ9NVN3 520 aa22.32■■□□□ 1.16
RHBDD3-205ENST00000488106 LUZP4Q9P127 313 aa22.32■■□□□ 1.16
RHBDD3-205ENST00000488106 C19orf25Q9UFG5 118 aaPredicted RBP22.32■■□□□ 1.16
RHBDD3-205ENST00000488106 TMCO1Q9UM00 188 aa22.32■■□□□ 1.16
RHBDD3-205ENST00000488106 TNPO3Q9Y5L0 923 aaKnown RBP22.32■■□□□ 1.16
RHBDD3-205ENST00000488106 A0A1W2PQ72 361 aa22.31■■□□□ 1.16
RHBDD3-205ENST00000488106 SMIM23A6NLE4 172 aa22.31■■□□□ 1.16
RHBDD3-205ENST00000488106 ESPNB1AK53 854 aa22.31■■□□□ 1.16
RHBDD3-205ENST00000488106 J3QKU1 62 aa22.31■■□□□ 1.16
RHBDD3-205ENST00000488106 PSMD12O00232 456 aaPredicted RBP22.31■■□□□ 1.16
RHBDD3-205ENST00000488106 E2F3O00716 465 aa22.31■■□□□ 1.16
RHBDD3-205ENST00000488106 KLHL41O60662 606 aa22.31■■□□□ 1.16
RHBDD3-205ENST00000488106 B4GALT2O60909 372 aa22.31■■□□□ 1.16
RHBDD3-205ENST00000488106 SH3BGRLO75368 114 aa22.31■■□□□ 1.16
RHBDD3-205ENST00000488106 SEC24DO94855 1032 aaPredicted RBP22.31■■□□□ 1.16
RHBDD3-205ENST00000488106 CELA2AP08217 269 aa22.31■■□□□ 1.16
RHBDD3-205ENST00000488106 CYC1P08574 325 aa22.31■■□□□ 1.16
RHBDD3-205ENST00000488106 RNH1P13489 461 aaKnown RBP22.31■■□□□ 1.16
RHBDD3-205ENST00000488106 IL10P22301 178 aa22.31■■□□□ 1.16
RHBDD3-205ENST00000488106 HPDP32754 393 aaPredicted RBP22.31■■□□□ 1.16
RHBDD3-205ENST00000488106 VSNL1P62760 191 aa22.31■■□□□ 1.16
RHBDD3-205ENST00000488106 RHAGQ02094 409 aa22.31■■□□□ 1.16
RHBDD3-205ENST00000488106 DDX39BQ13838 428 aaKnown RBP22.31■■□□□ 1.16
RHBDD3-205ENST00000488106 TIFABQ6ZNK6 161 aa22.31■■□□□ 1.16
RHBDD3-205ENST00000488106 KBTBD2Q8IY47 623 aa22.31■■□□□ 1.16
RHBDD3-205ENST00000488106 AMER2Q8N7J2 671 aa22.31■■□□□ 1.16
RHBDD3-205ENST00000488106 OR2L5Q8NG80 312 aa22.31■■□□□ 1.16
RHBDD3-205ENST00000488106 TSLPQ969D9 159 aa22.31■■□□□ 1.16
RHBDD3-205ENST00000488106 F2RL3Q96RI0 385 aa22.31■■□□□ 1.16
RHBDD3-205ENST00000488106 ZNF700Q9H0M5 742 aa22.31■■□□□ 1.16
RHBDD3-205ENST00000488106 IPPKQ9H8X2 491 aa22.31■■□□□ 1.16
RHBDD3-205ENST00000488106 C5AR2Q9P296 337 aa22.31■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms