RNA–Protein interactions for RNA: ENST00000487539.1

CNN3-206, Transcript of calponin 3, humanhuman

TSL 2

Gene CNN3, Length 739 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNN3-206ENST00000487539 P4HTMQ9NXG6 502 aa4.15□□□□□ -1.75
CNN3-206ENST00000487539 TBC1D29Q9UFV1 150 aa4.15□□□□□ -1.75
CNN3-206ENST00000487539 NFU1Q9UMS0 254 aa4.15□□□□□ -1.75
CNN3-206ENST00000487539 USF3Q68DE3 2245 aa4.14□□□□□ -1.75
CNN3-206ENST00000487539 TRRAPQ9Y4A5 3859 aa4.14□□□□□ -1.75
CNN3-206ENST00000487539 SOCS6O14544 535 aa4.14□□□□□ -1.75
CNN3-206ENST00000487539 CLDN11O75508 207 aa4.14□□□□□ -1.75
CNN3-206ENST00000487539 POP4O95707 220 aaKnown RBP4.14□□□□□ -1.75
CNN3-206ENST00000487539 RPN1P04843 607 aaKnown RBP4.14□□□□□ -1.75
CNN3-206ENST00000487539 HOXD4P09016 255 aaPredicted RBP4.14□□□□□ -1.75
CNN3-206ENST00000487539 HOXC4P09017 264 aaPredicted RBP4.14□□□□□ -1.75
CNN3-206ENST00000487539 RAB40ALP0C0E4 278 aa4.14□□□□□ -1.75
CNN3-206ENST00000487539 UNGP13051 313 aaPredicted RBP4.14□□□□□ -1.75
CNN3-206ENST00000487539 NELFEP18615 380 aaKnown RBP4.14□□□□□ -1.75
CNN3-206ENST00000487539 TFEBP19484 476 aa4.14□□□□□ -1.75
CNN3-206ENST00000487539 TNFAIP3P21580 790 aa4.14□□□□□ -1.75
CNN3-206ENST00000487539 RORAP35398 523 aa4.14□□□□□ -1.75
CNN3-206ENST00000487539 PIK3CAP42336 1068 aa4.14□□□□□ -1.75
CNN3-206ENST00000487539 NR4A2P43354 598 aa4.14□□□□□ -1.75
CNN3-206ENST00000487539 GCLMP48507 274 aa4.14□□□□□ -1.75
CNN3-206ENST00000487539 AGTR2P50052 363 aa4.14□□□□□ -1.75
CNN3-206ENST00000487539 CDH4P55283 916 aa4.14□□□□□ -1.75
CNN3-206ENST00000487539 DMPKQ09013 629 aa4.14□□□□□ -1.75
CNN3-206ENST00000487539 ABRQ12979 859 aa4.14□□□□□ -1.75
CNN3-206ENST00000487539 MTA1Q13330 715 aa4.14□□□□□ -1.75
CNN3-206ENST00000487539 C10orf62Q5T681 223 aaPredicted RBP4.14□□□□□ -1.75
CNN3-206ENST00000487539 IYDQ6PHW0 289 aa4.14□□□□□ -1.75
CNN3-206ENST00000487539 PHLDB2Q86SQ0 1253 aa4.14□□□□□ -1.75
CNN3-206ENST00000487539 CHERPQ8IWX8 916 aaKnown RBP4.14□□□□□ -1.75
CNN3-206ENST00000487539 LAS2Q8IYD9 372 aa4.14□□□□□ -1.75
CNN3-206ENST00000487539 DSELQ8IZU8 1212 aa4.14□□□□□ -1.75
CNN3-206ENST00000487539 TTC30BQ8N4P2 665 aa4.14□□□□□ -1.75
CNN3-206ENST00000487539 ATP6V0D2Q8N8Y2 350 aa4.14□□□□□ -1.75
CNN3-206ENST00000487539 ADPRHL1Q8NDY3 354 aa4.14□□□□□ -1.75
CNN3-206ENST00000487539 SRFBP1Q8NEF9 429 aaKnown RBP4.14□□□□□ -1.75
CNN3-206ENST00000487539 OR2AP1Q8NGE2 309 aa4.14□□□□□ -1.75
CNN3-206ENST00000487539 CA5BP1Q8WTZ4 195 aa4.14□□□□□ -1.75
CNN3-206ENST00000487539 IRGQQ8WZA9 623 aa4.14□□□□□ -1.75
CNN3-206ENST00000487539 PPM1MQ96MI6 270 aa4.14□□□□□ -1.75
CNN3-206ENST00000487539 ZNF48Q96MX3 618 aaPredicted RBP4.14□□□□□ -1.75
CNN3-206ENST00000487539 TRMOQ9BU70 441 aa4.14□□□□□ -1.75
CNN3-206ENST00000487539 C19orf24Q9BVV8 132 aa4.14□□□□□ -1.75
CNN3-206ENST00000487539 WASH6PQ9NQA3 447 aa4.14□□□□□ -1.75
CNN3-206ENST00000487539 RASSF1Q9NS23 344 aa4.14□□□□□ -1.75
CNN3-206ENST00000487539 TMEM184CQ9NVA4 438 aa4.14□□□□□ -1.75
CNN3-206ENST00000487539 IL17CQ9P0M4 197 aa4.14□□□□□ -1.75
CNN3-206ENST00000487539 KCNN3Q9UGI6 736 aa4.14□□□□□ -1.75
CNN3-206ENST00000487539 RARRES3Q9UL19 164 aa4.14□□□□□ -1.75
CNN3-206ENST00000487539 ZNF835Q9Y2P0 537 aa4.14□□□□□ -1.75
CNN3-206ENST00000487539 ABCA1O95477 2261 aa4.14□□□□□ -1.75
CNN3-206ENST00000487539 DOCK4Q8N1I0 1966 aa4.13□□□□□ -1.75
CNN3-206ENST00000487539 C2CD4BA6NLJ0 364 aa4.13□□□□□ -1.75
CNN3-206ENST00000487539 MAPK13O15264 365 aa4.13□□□□□ -1.75
CNN3-206ENST00000487539 SCRG1O75711 98 aa4.13□□□□□ -1.75
CNN3-206ENST00000487539 IGKV2-30P06310 120 aa4.13□□□□□ -1.75
CNN3-206ENST00000487539 UMODP07911 640 aa4.13□□□□□ -1.75
CNN3-206ENST00000487539 NPPBP16860 134 aa4.13□□□□□ -1.75
CNN3-206ENST00000487539 UGT1A4P22310 534 aa4.13□□□□□ -1.75
CNN3-206ENST00000487539 CASP1P29466 404 aa4.13□□□□□ -1.75
CNN3-206ENST00000487539 IDUAP35475 653 aa4.13□□□□□ -1.75
CNN3-206ENST00000487539 MMP12P39900 470 aa4.13□□□□□ -1.75
CNN3-206ENST00000487539 STAT6P42226 847 aa4.13□□□□□ -1.75
CNN3-206ENST00000487539 ZNF84P51523 738 aa4.13□□□□□ -1.75
CNN3-206ENST00000487539 GAB1Q13480 694 aa4.13□□□□□ -1.75
CNN3-206ENST00000487539 ALCAMQ13740 583 aa4.13□□□□□ -1.75
CNN3-206ENST00000487539 UGP2Q16851 508 aa4.13□□□□□ -1.75
CNN3-206ENST00000487539 PYCR3Q53H96 274 aa4.13□□□□□ -1.75
CNN3-206ENST00000487539 OTUD1Q5VV17 481 aaPredicted RBP4.13□□□□□ -1.75
CNN3-206ENST00000487539 RPUSD3Q6P087 351 aaKnown RBP4.13□□□□□ -1.75
CNN3-206ENST00000487539 WDR93Q6P2C0 686 aa4.13□□□□□ -1.75
CNN3-206ENST00000487539 PODNL1Q6PEZ8 512 aa4.13□□□□□ -1.75
CNN3-206ENST00000487539 PAMR1Q6UXH9 720 aa4.13□□□□□ -1.75
CNN3-206ENST00000487539 ZNF793Q6ZN11 406 aa4.13□□□□□ -1.75
CNN3-206ENST00000487539 FAM57BQ71RH2 274 aa4.13□□□□□ -1.75
CNN3-206ENST00000487539 PRSS42Q7Z5A4 293 aa4.13□□□□□ -1.75
CNN3-206ENST00000487539 DOLPP1Q86YN1 238 aa4.13□□□□□ -1.75
CNN3-206ENST00000487539 TMEM126BQ8IUX1 230 aa4.13□□□□□ -1.75
CNN3-206ENST00000487539 CCDC71Q8IV32 467 aaPredicted RBP4.13□□□□□ -1.75
CNN3-206ENST00000487539 GUF1Q8N442 669 aaKnown RBP4.13□□□□□ -1.75
CNN3-206ENST00000487539 RPRMLQ8N4K4 120 aa4.13□□□□□ -1.75
CNN3-206ENST00000487539 CLEC1AQ8NC01 280 aa4.13□□□□□ -1.75
CNN3-206ENST00000487539 RASSF8Q8NHQ8 419 aa4.13□□□□□ -1.75
CNN3-206ENST00000487539 AGAP11Q8TF27 550 aa4.13□□□□□ -1.75
CNN3-206ENST00000487539 TM9SF4Q92544 642 aa4.13□□□□□ -1.75
CNN3-206ENST00000487539 ARHGEF2Q92974 986 aaKnown RBP4.13□□□□□ -1.75
CNN3-206ENST00000487539 FAM149B1Q96BN6 582 aa4.13□□□□□ -1.75
CNN3-206ENST00000487539 ARHGEF26Q96DR7 871 aa4.13□□□□□ -1.75
CNN3-206ENST00000487539 TRMT61AQ96FX7 289 aaKnown RBP4.13□□□□□ -1.75
CNN3-206ENST00000487539 RMND5BQ96G75 393 aaPredicted RBP4.13□□□□□ -1.75
CNN3-206ENST00000487539 SLC41A2Q96JW4 573 aa4.13□□□□□ -1.75
CNN3-206ENST00000487539 PRPF18Q99633 342 aaKnown RBP4.13□□□□□ -1.75
CNN3-206ENST00000487539 TUBB6Q9BUF5 446 aa4.13□□□□□ -1.75
CNN3-206ENST00000487539 KCNK6Q9Y257 313 aa4.13□□□□□ -1.75
CNN3-206ENST00000487539 SLC17A4Q9Y2C5 497 aa4.13□□□□□ -1.75
CNN3-206ENST00000487539 LRCH1Q9Y2L9 728 aa4.13□□□□□ -1.75
CNN3-206ENST00000487539 L3MBTL1Q9Y468 752 aa4.13□□□□□ -1.75
CNN3-206ENST00000487539 PCM1Q15154 2024 aa4.12□□□□□ -1.75
CNN3-206ENST00000487539 CMYA5Q8N3K9 4069 aa4.12□□□□□ -1.75
CNN3-206ENST00000487539 A0A0G2JK05 382 aa4.12□□□□□ -1.75
CNN3-206ENST00000487539 A0A1W2PPR1 153 aa4.12□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms