RNA–Protein interactions for RNA: ENST00000487401.1

SREBF1-215, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 2

Gene SREBF1, Length 477 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-215ENST00000487401 NCF1P14598 390 aaPredicted RBP11.68□□□□□ -0.54
SREBF1-215ENST00000487401 EEF1DP29692 281 aaKnown RBP11.68□□□□□ -0.54
SREBF1-215ENST00000487401 GDF5P43026 501 aa11.68□□□□□ -0.54
SREBF1-215ENST00000487401 ST13P50502 369 aaKnown RBP11.68□□□□□ -0.54
SREBF1-215ENST00000487401 BTG2P78543 158 aa11.68□□□□□ -0.54
SREBF1-215ENST00000487401 MRPS25P82663 173 aaKnown RBP11.68□□□□□ -0.54
SREBF1-215ENST00000487401 ALDH6A1Q02252 535 aaKnown RBP11.68□□□□□ -0.54
SREBF1-215ENST00000487401 SLC25A25Q6KCM7 469 aa11.68□□□□□ -0.54
SREBF1-215ENST00000487401 MTFR2Q6P444 385 aa11.68□□□□□ -0.54
SREBF1-215ENST00000487401 TMIGD1Q6UXZ0 262 aa11.68□□□□□ -0.54
SREBF1-215ENST00000487401 GPSM1Q86YR5 675 aa11.68□□□□□ -0.54
SREBF1-215ENST00000487401 LURAP1LQ8IV03 231 aa11.68□□□□□ -0.54
SREBF1-215ENST00000487401 CEP97Q8IW35 865 aa11.68□□□□□ -0.54
SREBF1-215ENST00000487401 LGI4Q8N135 537 aa11.68□□□□□ -0.54
SREBF1-215ENST00000487401 KRT78Q8N1N4 520 aa11.68□□□□□ -0.54
SREBF1-215ENST00000487401 TCAIMQ8N3R3 496 aa11.68□□□□□ -0.54
SREBF1-215ENST00000487401 SPATA6LQ8N4H0 392 aa11.68□□□□□ -0.54
SREBF1-215ENST00000487401 MDS2Q8NDY4 140 aa11.68□□□□□ -0.54
SREBF1-215ENST00000487401 ELP5Q8TE02 316 aa11.68□□□□□ -0.54
SREBF1-215ENST00000487401 CREB3L4Q8TEY5 395 aa11.68□□□□□ -0.54
SREBF1-215ENST00000487401 RHBDF1Q96CC6 855 aa11.68□□□□□ -0.54
SREBF1-215ENST00000487401 SIGLEC12Q96PQ1 595 aa11.68□□□□□ -0.54
SREBF1-215ENST00000487401 NPAS2Q99743 824 aa11.68□□□□□ -0.54
SREBF1-215ENST00000487401 ERP44Q9BS26 406 aa11.68□□□□□ -0.54
SREBF1-215ENST00000487401 UNKQ9C0B0 810 aaKnown RBP11.68□□□□□ -0.54
SREBF1-215ENST00000487401 DERL2Q9GZP9 239 aa11.68□□□□□ -0.54
SREBF1-215ENST00000487401 DPH5Q9H2P9 285 aa11.68□□□□□ -0.54
SREBF1-215ENST00000487401 CNOT10Q9H9A5 744 aaKnown RBP11.68□□□□□ -0.54
SREBF1-215ENST00000487401 PRM3Q9NNZ6 103 aa11.68□□□□□ -0.54
SREBF1-215ENST00000487401 SAYSD1Q9NPB0 183 aa11.68□□□□□ -0.54
SREBF1-215ENST00000487401 MTO1Q9Y2Z2 717 aaKnown RBP11.68□□□□□ -0.54
SREBF1-215ENST00000487401 SHANK1Q9Y566 2161 aa11.68□□□□□ -0.54
SREBF1-215ENST00000487401 ESPL1Q14674 2120 aa11.68□□□□□ -0.54
SREBF1-215ENST00000487401 A0A088AWK7 358 aa11.67□□□□□ -0.54
SREBF1-215ENST00000487401 CTAGE15A4D2H0 777 aa11.67□□□□□ -0.54
SREBF1-215ENST00000487401 A8MUA0 341 aa11.67□□□□□ -0.54
SREBF1-215ENST00000487401 PRSS44E7EML9 344 aa11.67□□□□□ -0.54
SREBF1-215ENST00000487401 CLGNO14967 610 aa11.67□□□□□ -0.54
SREBF1-215ENST00000487401 EIF3HO15372 352 aaKnown RBP eCLIP11.67□□□□□ -0.54
SREBF1-215ENST00000487401 MAN1A2O60476 641 aa11.67□□□□□ -0.54
SREBF1-215ENST00000487401 PIAS1O75925 651 aa11.67□□□□□ -0.54
SREBF1-215ENST00000487401 SP1P08047 785 aa11.67□□□□□ -0.54
SREBF1-215ENST00000487401 CCDC166P0CW27 439 aa11.67□□□□□ -0.54
SREBF1-215ENST00000487401 SMIM10L1P0DMW3 83 aa11.67□□□□□ -0.54
SREBF1-215ENST00000487401 MAOAP21397 527 aa11.67□□□□□ -0.54
SREBF1-215ENST00000487401 ZNF10P21506 573 aaPredicted RBP11.67□□□□□ -0.54
SREBF1-215ENST00000487401 HPDP32754 393 aaPredicted RBP11.67□□□□□ -0.54
SREBF1-215ENST00000487401 SLC6A12P48065 614 aa11.67□□□□□ -0.54
SREBF1-215ENST00000487401 HYAL2Q12891 473 aa11.67□□□□□ -0.54
SREBF1-215ENST00000487401 CBLBQ13191 982 aa11.67□□□□□ -0.54
SREBF1-215ENST00000487401 SLBPQ14493 270 aaKnown RBP eCLIP11.67□□□□□ -0.54
SREBF1-215ENST00000487401 TGFBIQ15582 683 aa11.67□□□□□ -0.54
SREBF1-215ENST00000487401 MAPKAPK3Q16644 382 aa11.67□□□□□ -0.54
SREBF1-215ENST00000487401 C18orf21Q32NC0 220 aaPredicted RBP11.67□□□□□ -0.54
SREBF1-215ENST00000487401 KRTCAP3Q53RY4 240 aa11.67□□□□□ -0.54
SREBF1-215ENST00000487401 SP5Q6BEB4 398 aaPredicted RBP11.67□□□□□ -0.54
SREBF1-215ENST00000487401 SLCO4C1Q6ZQN7 724 aa11.67□□□□□ -0.54
SREBF1-215ENST00000487401 CTAGE6Q86UF2 777 aa11.67□□□□□ -0.54
SREBF1-215ENST00000487401 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP11.67□□□□□ -0.54
SREBF1-215ENST00000487401 KLHDC8AQ8IYD2 350 aa11.67□□□□□ -0.54
SREBF1-215ENST00000487401 CA13Q8N1Q1 262 aa11.67□□□□□ -0.54
SREBF1-215ENST00000487401 KIF2BQ8N4N8 673 aa11.67□□□□□ -0.54
SREBF1-215ENST00000487401 SNX31Q8N9S9 440 aa11.67□□□□□ -0.54
SREBF1-215ENST00000487401 FAM98AQ8NCA5 519 aaKnown RBP11.67□□□□□ -0.54
SREBF1-215ENST00000487401 SCMH1Q96GD3 660 aa11.67□□□□□ -0.54
SREBF1-215ENST00000487401 SMIM10Q96HG1 83 aa11.67□□□□□ -0.54
SREBF1-215ENST00000487401 CPNE1Q99829 537 aa11.67□□□□□ -0.54
SREBF1-215ENST00000487401 HES7Q9BYE0 225 aa11.67□□□□□ -0.54
SREBF1-215ENST00000487401 DEFB126Q9BYW3 111 aa11.67□□□□□ -0.54
SREBF1-215ENST00000487401 SMYD2Q9NRG4 433 aa11.67□□□□□ -0.54
SREBF1-215ENST00000487401 WWOXQ9NZC7 414 aa11.67□□□□□ -0.54
SREBF1-215ENST00000487401 GPRC5BQ9NZH0 403 aa11.67□□□□□ -0.54
SREBF1-215ENST00000487401 WHRNQ9P202 907 aa11.67□□□□□ -0.54
SREBF1-215ENST00000487401 LRFN1Q9P244 771 aa11.67□□□□□ -0.54
SREBF1-215ENST00000487401 SH3BGRL2Q9UJC5 107 aa11.67□□□□□ -0.54
SREBF1-215ENST00000487401 PYCARDQ9ULZ3 195 aa11.67□□□□□ -0.54
SREBF1-215ENST00000487401 ENTPD4Q9Y227 616 aa11.67□□□□□ -0.54
SREBF1-215ENST00000487401 DOPEY1Q5JWR5 2465 aa11.67□□□□□ -0.54
SREBF1-215ENST00000487401 SPTBN1Q01082 2364 aaKnown RBP11.66□□□□□ -0.54
SREBF1-215ENST00000487401 TCRBV16S1A1N1A0A5B0 115 aa11.66□□□□□ -0.54
SREBF1-215ENST00000487401 ARHGAP10A1A4S6 786 aa11.66□□□□□ -0.54
SREBF1-215ENST00000487401 ANKDD1BA6NHY2 528 aa11.66□□□□□ -0.54
SREBF1-215ENST00000487401 SAGE2PA6NJ88 616 aa11.66□□□□□ -0.54
SREBF1-215ENST00000487401 CXorf49A8MYA2 514 aaPredicted RBP11.66□□□□□ -0.54
SREBF1-215ENST00000487401 CLDN4O14493 209 aa11.66□□□□□ -0.54
SREBF1-215ENST00000487401 HNRNPRO43390 633 aaKnown RBP11.66□□□□□ -0.54
SREBF1-215ENST00000487401 ERI3O43414 337 aaKnown RBP11.66□□□□□ -0.54
SREBF1-215ENST00000487401 B3GALT2O43825 422 aa11.66□□□□□ -0.54
SREBF1-215ENST00000487401 SLC19A2O60779 497 aa11.66□□□□□ -0.54
SREBF1-215ENST00000487401 S100BP04271 92 aaPredicted RBP11.66□□□□□ -0.54
SREBF1-215ENST00000487401 ESRRAP11474 423 aaPredicted RBP11.66□□□□□ -0.54
SREBF1-215ENST00000487401 STMN1P16949 149 aa11.66□□□□□ -0.54
SREBF1-215ENST00000487401 GSTM2P28161 218 aa11.66□□□□□ -0.54
SREBF1-215ENST00000487401 TPP2P29144 1249 aaPredicted RBP11.66□□□□□ -0.54
SREBF1-215ENST00000487401 SSTR1P30872 391 aa11.66□□□□□ -0.54
SREBF1-215ENST00000487401 CA7P43166 264 aa11.66□□□□□ -0.54
SREBF1-215ENST00000487401 CYB561P49447 251 aa11.66□□□□□ -0.54
SREBF1-215ENST00000487401 ATP6V0D1P61421 351 aa11.66□□□□□ -0.54
SREBF1-215ENST00000487401 ART3Q13508 389 aa11.66□□□□□ -0.54
SREBF1-215ENST00000487401 CDKL4Q5MAI5 379 aa11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms