RNA–Protein interactions for RNA: ENST00000487354.1

MCF2L-228, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 3

Gene MCF2L, Length 553 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-228ENST00000487354 FBXO6Q9NRD1 293 aaPredicted RBP14.31□□□□□ -0.12
MCF2L-228ENST00000487354 PDE10AQ9Y233 779 aa14.31□□□□□ -0.12
MCF2L-228ENST00000487354 DRG1Q9Y295 367 aaKnown RBP14.31□□□□□ -0.12
MCF2L-228ENST00000487354 DHRS7Q9Y394 339 aa14.31□□□□□ -0.12
MCF2L-228ENST00000487354 A0A0G2JNJ9 132 aa14.3□□□□□ -0.12
MCF2L-228ENST00000487354 FAM237BA0A1B0GVD1 139 aa14.3□□□□□ -0.12
MCF2L-228ENST00000487354 TMEM200CA6NKL6 621 aa14.3□□□□□ -0.12
MCF2L-228ENST00000487354 NDUFS4O43181 175 aa14.3□□□□□ -0.12
MCF2L-228ENST00000487354 PROM1O43490 865 aa14.3□□□□□ -0.12
MCF2L-228ENST00000487354 ZBTB14O43829 449 aa14.3□□□□□ -0.12
MCF2L-228ENST00000487354 AVILO75366 819 aa14.3□□□□□ -0.12
MCF2L-228ENST00000487354 NPPBP16860 134 aa14.3□□□□□ -0.12
MCF2L-228ENST00000487354 ALOX12P18054 663 aa14.3□□□□□ -0.12
MCF2L-228ENST00000487354 JAK1P23458 1154 aa14.3□□□□□ -0.12
MCF2L-228ENST00000487354 ADH7P40394 386 aa14.3□□□□□ -0.12
MCF2L-228ENST00000487354 GPR143P51810 404 aa14.3□□□□□ -0.12
MCF2L-228ENST00000487354 BASP1P80723 227 aaKnown RBP14.3□□□□□ -0.12
MCF2L-228ENST00000487354 HYAL2Q12891 473 aa14.3□□□□□ -0.12
MCF2L-228ENST00000487354 ZNF470Q6ECI4 717 aa14.3□□□□□ -0.12
MCF2L-228ENST00000487354 AGTRAPQ6RW13 159 aa14.3□□□□□ -0.12
MCF2L-228ENST00000487354 LCTLQ6UWM7 567 aa14.3□□□□□ -0.12
MCF2L-228ENST00000487354 KIAA0408Q6ZU52 694 aa14.3□□□□□ -0.12
MCF2L-228ENST00000487354 C17orf64Q86WR6 236 aa14.3□□□□□ -0.12
MCF2L-228ENST00000487354 TMEM139Q8IV31 216 aa14.3□□□□□ -0.12
MCF2L-228ENST00000487354 SYCE1Q8N0S2 351 aa14.3□□□□□ -0.12
MCF2L-228ENST00000487354 CYP4X1Q8N118 509 aa14.3□□□□□ -0.12
MCF2L-228ENST00000487354 ABHD11Q8NFV4 315 aa14.3□□□□□ -0.12
MCF2L-228ENST00000487354 OR4K1Q8NGD4 311 aa14.3□□□□□ -0.12
MCF2L-228ENST00000487354 OR4K3Q96R72 315 aa14.3□□□□□ -0.12
MCF2L-228ENST00000487354 TTYH2Q9BSA4 534 aa14.3□□□□□ -0.12
MCF2L-228ENST00000487354 FAM129AQ9BZQ8 928 aa14.3□□□□□ -0.12
MCF2L-228ENST00000487354 ATG10Q9H0Y0 220 aa14.3□□□□□ -0.12
MCF2L-228ENST00000487354 DEFB127Q9H1M4 99 aa14.3□□□□□ -0.12
MCF2L-228ENST00000487354 Q9UFV3 132 aa14.3□□□□□ -0.12
MCF2L-228ENST00000487354 PPIEQ9UNP9 301 aaKnown RBP14.3□□□□□ -0.12
MCF2L-228ENST00000487354 TRBV11-1A0A0K0K1C0 115 aa14.29□□□□□ -0.12
MCF2L-228ENST00000487354 TGFBR3LH3BV60 316 aa14.29□□□□□ -0.12
MCF2L-228ENST00000487354 FCHO1O14526 889 aa14.29□□□□□ -0.12
MCF2L-228ENST00000487354 CEP104O60308 925 aa14.29□□□□□ -0.12
MCF2L-228ENST00000487354 ITGA10O75578 1167 aa14.29□□□□□ -0.12
MCF2L-228ENST00000487354 ZNF888P0CJ79 500 aaPredicted RBP14.29□□□□□ -0.12
MCF2L-228ENST00000487354 GLI4P10075 376 aa14.29□□□□□ -0.12
MCF2L-228ENST00000487354 DRD2P14416 443 aa14.29□□□□□ -0.12
MCF2L-228ENST00000487354 TPSB2P20231 275 aa14.29□□□□□ -0.12
MCF2L-228ENST00000487354 ADAM8P78325 824 aa14.29□□□□□ -0.12
MCF2L-228ENST00000487354 CTBP1Q13363 440 aa14.29□□□□□ -0.12
MCF2L-228ENST00000487354 SNTB1Q13884 538 aaKnown RBP14.29□□□□□ -0.12
MCF2L-228ENST00000487354 TPSAB1Q15661 275 aa14.29□□□□□ -0.12
MCF2L-228ENST00000487354 PHKG1Q16816 387 aa14.29□□□□□ -0.12
MCF2L-228ENST00000487354 GXYLT1Q4G148 440 aa14.29□□□□□ -0.12
MCF2L-228ENST00000487354 C16orf47Q6ZP98 133 aaPredicted RBP14.29□□□□□ -0.12
MCF2L-228ENST00000487354 ACAD11Q709F0 780 aa14.29□□□□□ -0.12
MCF2L-228ENST00000487354 ZZZ3Q8IYH5 903 aa14.29□□□□□ -0.12
MCF2L-228ENST00000487354 NT5CQ8TCD5 201 aa14.29□□□□□ -0.12
MCF2L-228ENST00000487354 UTP15Q8TED0 518 aaKnown RBP14.29□□□□□ -0.12
MCF2L-228ENST00000487354 GPATCH1Q9BRR8 931 aaKnown RBP14.29□□□□□ -0.12
MCF2L-228ENST00000487354 DEFB126Q9BYW3 111 aa14.29□□□□□ -0.12
MCF2L-228ENST00000487354 PCBD2Q9H0N5 130 aa14.29□□□□□ -0.12
MCF2L-228ENST00000487354 TSPY26PQ9H489 355 aa14.29□□□□□ -0.12
MCF2L-228ENST00000487354 PLEKHA6Q9Y2H5 1048 aa14.29□□□□□ -0.12
MCF2L-228ENST00000487354 ZCWPW2A0A1B0GU75 182 aa14.28□□□□□ -0.12
MCF2L-228ENST00000487354 USP27XA6NNY8 438 aa14.28□□□□□ -0.12
MCF2L-228ENST00000487354 FAM166BA8MTA8 275 aa14.28□□□□□ -0.12
MCF2L-228ENST00000487354 A8MUA0 341 aa14.28□□□□□ -0.12
MCF2L-228ENST00000487354 NPIPA2E9PIF3 369 aa14.28□□□□□ -0.12
MCF2L-228ENST00000487354 NPIPA3F8WFD2 350 aa14.28□□□□□ -0.12
MCF2L-228ENST00000487354 PFDN6O15212 129 aa14.28□□□□□ -0.12
MCF2L-228ENST00000487354 GLSO94925 669 aaPredicted RBP14.28□□□□□ -0.12
MCF2L-228ENST00000487354 SMIM10L1P0DMW3 83 aa14.28□□□□□ -0.12
MCF2L-228ENST00000487354 ACVR2AP27037 513 aa14.28□□□□□ -0.12
MCF2L-228ENST00000487354 SLC1A2P43004 574 aa14.28□□□□□ -0.12
MCF2L-228ENST00000487354 PPP2R2AP63151 447 aa14.28□□□□□ -0.12
MCF2L-228ENST00000487354 NAE1Q13564 534 aa14.28□□□□□ -0.12
MCF2L-228ENST00000487354 PWP1Q13610 501 aa14.28□□□□□ -0.12
MCF2L-228ENST00000487354 SEL1L2Q5TEA6 688 aa14.28□□□□□ -0.12
MCF2L-228ENST00000487354 DRICH1Q6PGQ1 229 aaPredicted RBP14.28□□□□□ -0.12
MCF2L-228ENST00000487354 CAND1Q86VP6 1230 aaKnown RBP14.28□□□□□ -0.12
MCF2L-228ENST00000487354 CLYBLQ8N0X4 340 aa14.28□□□□□ -0.12
MCF2L-228ENST00000487354 AGGF1Q8N302 714 aaeCLIP14.28□□□□□ -0.12
MCF2L-228ENST00000487354 PSD4Q8NDX1 1056 aa14.28□□□□□ -0.12
MCF2L-228ENST00000487354 B3GNT7Q8NFL0 401 aa14.28□□□□□ -0.12
MCF2L-228ENST00000487354 OR2M7Q8NG81 312 aa14.28□□□□□ -0.12
MCF2L-228ENST00000487354 OR5M9Q8NGP3 310 aa14.28□□□□□ -0.12
MCF2L-228ENST00000487354 OR5M3Q8NGP4 307 aa14.28□□□□□ -0.12
MCF2L-228ENST00000487354 SMIM10Q96HG1 83 aa14.28□□□□□ -0.12
MCF2L-228ENST00000487354 ALPK1Q96QP1 1244 aa14.28□□□□□ -0.12
MCF2L-228ENST00000487354 POLDIP3Q9BY77 421 aaKnown RBP14.28□□□□□ -0.12
MCF2L-228ENST00000487354 TTTY12Q9BZ98 90 aa14.28□□□□□ -0.12
MCF2L-228ENST00000487354 PRDM9Q9NQV7 894 aa14.28□□□□□ -0.12
MCF2L-228ENST00000487354 KCMF1Q9P0J7 381 aa14.28□□□□□ -0.12
MCF2L-228ENST00000487354 VPS9D1Q9Y2B5 631 aa14.28□□□□□ -0.12
MCF2L-228ENST00000487354 MPDZO75970 2070 aa14.27□□□□□ -0.12
MCF2L-228ENST00000487354 KIAA1549Q9HCM3 1950 aa14.27□□□□□ -0.12
MCF2L-228ENST00000487354 TRBC2A0A5B9 178 aa14.27□□□□□ -0.13
MCF2L-228ENST00000487354 AP3B1O00203 1094 aa14.27□□□□□ -0.13
MCF2L-228ENST00000487354 EIF3FO00303 357 aaPredicted RBP14.27□□□□□ -0.13
MCF2L-228ENST00000487354 IPO7O95373 1038 aaKnown RBP14.27□□□□□ -0.13
MCF2L-228ENST00000487354 IGHG3P01860 377 aa14.27□□□□□ -0.13
MCF2L-228ENST00000487354 TUBB4AP04350 444 aa14.27□□□□□ -0.13
MCF2L-228ENST00000487354 FOSL1P15407 271 aa14.27□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms