RNA–Protein interactions for RNA: ENST00000487332.1

RNF220-215, Transcript of ring finger protein 220, humanhuman

TSL 3

Gene RNF220, Length 452 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF220-215ENST00000487332 PRAMEF9Q5VWM5 478 aa9.68□□□□□ -0.86
RNF220-215ENST00000487332 HIST2H2AA3Q6FI13 130 aa9.68□□□□□ -0.86
RNF220-215ENST00000487332 GRHL2Q6ISB3 625 aa9.68□□□□□ -0.86
RNF220-215ENST00000487332 ISLR2Q6UXK2 745 aa9.68□□□□□ -0.86
RNF220-215ENST00000487332 TIFABQ6ZNK6 161 aa9.68□□□□□ -0.86
RNF220-215ENST00000487332 CPEB2Q7Z5Q1 589 aaKnown RBP9.68□□□□□ -0.86
RNF220-215ENST00000487332 PRSS58Q8IYP2 241 aa9.68□□□□□ -0.86
RNF220-215ENST00000487332 ZADH2Q8N4Q0 377 aa9.68□□□□□ -0.86
RNF220-215ENST00000487332 SNX31Q8N9S9 440 aa9.68□□□□□ -0.86
RNF220-215ENST00000487332 SRFBP1Q8NEF9 429 aaKnown RBP9.68□□□□□ -0.86
RNF220-215ENST00000487332 C7orf57Q8NEG2 295 aa9.68□□□□□ -0.86
RNF220-215ENST00000487332 OR2L5Q8NG80 312 aa9.68□□□□□ -0.86
RNF220-215ENST00000487332 C8orf44Q96CB5 159 aa9.68□□□□□ -0.86
RNF220-215ENST00000487332 YIPF2Q9BWQ6 316 aa9.68□□□□□ -0.86
RNF220-215ENST00000487332 ROGDIQ9GZN7 287 aa9.68□□□□□ -0.86
RNF220-215ENST00000487332 AICDAQ9GZX7 198 aa9.68□□□□□ -0.86
RNF220-215ENST00000487332 PPCSQ9HAB8 311 aa9.68□□□□□ -0.86
RNF220-215ENST00000487332 PPT2Q9UMR5 302 aa9.68□□□□□ -0.86
RNF220-215ENST00000487332 NFU1Q9UMS0 254 aa9.68□□□□□ -0.86
RNF220-215ENST00000487332 MMACHCQ9Y4U1 282 aa9.68□□□□□ -0.86
RNF220-215ENST00000487332 BOD1L1Q8NFC6 3051 aa9.68□□□□□ -0.86
RNF220-215ENST00000487332 COL6A6A6NMZ7 2263 aa9.67□□□□□ -0.86
RNF220-215ENST00000487332 IGKV3D-11A0A0A0MRZ8 115 aa9.67□□□□□ -0.86
RNF220-215ENST00000487332 EXOC1LA0A1B0GW35 172 aa9.67□□□□□ -0.86
RNF220-215ENST00000487332 BLACEA4D250 179 aa9.67□□□□□ -0.86
RNF220-215ENST00000487332 C4orf51C9J302 202 aa9.67□□□□□ -0.86
RNF220-215ENST00000487332 FFAR3O14843 346 aa9.67□□□□□ -0.86
RNF220-215ENST00000487332 GPR42O15529 346 aa9.67□□□□□ -0.86
RNF220-215ENST00000487332 CHST10O43529 356 aa9.67□□□□□ -0.86
RNF220-215ENST00000487332 JRKO75564 520 aa9.67□□□□□ -0.86
RNF220-215ENST00000487332 SERPIND1P05546 499 aa9.67□□□□□ -0.86
RNF220-215ENST00000487332 SNRPAP09012 282 aaKnown RBP9.67□□□□□ -0.86
RNF220-215ENST00000487332 ATXN8OSP0DMR3 200 aa9.67□□□□□ -0.86
RNF220-215ENST00000487332 HNRNPH1P31943 449 aaKnown RBP9.67□□□□□ -0.86
RNF220-215ENST00000487332 HNF4AP41235 474 aa9.67□□□□□ -0.86
RNF220-215ENST00000487332 KCNC4Q03721 635 aa9.67□□□□□ -0.86
RNF220-215ENST00000487332 TGM3Q08188 693 aa9.67□□□□□ -0.86
RNF220-215ENST00000487332 CHIT1Q13231 466 aa9.67□□□□□ -0.86
RNF220-215ENST00000487332 RCN2Q14257 317 aa9.67□□□□□ -0.86
RNF220-215ENST00000487332 TERF2Q15554 542 aa9.67□□□□□ -0.86
RNF220-215ENST00000487332 INAQ16352 499 aa9.67□□□□□ -0.86
RNF220-215ENST00000487332 MINDY4Q4G0A6 757 aa9.67□□□□□ -0.86
RNF220-215ENST00000487332 TMEM35AQ53FP2 167 aa9.67□□□□□ -0.86
RNF220-215ENST00000487332 TOR1AIP1Q5JTV8 583 aa9.67□□□□□ -0.86
RNF220-215ENST00000487332 LGSNQ5TDP6 509 aa9.67□□□□□ -0.86
RNF220-215ENST00000487332 LIPJQ5W064 366 aa9.67□□□□□ -0.86
RNF220-215ENST00000487332 H3F3CQ6NXT2 135 aa9.67□□□□□ -0.86
RNF220-215ENST00000487332 RPUSD3Q6P087 351 aaKnown RBP9.67□□□□□ -0.86
RNF220-215ENST00000487332 MED27Q6P2C8 311 aa9.67□□□□□ -0.86
RNF220-215ENST00000487332 TRIM40Q6P9F5 258 aa9.67□□□□□ -0.86
RNF220-215ENST00000487332 ADGRD1Q6QNK2 874 aa9.67□□□□□ -0.86
RNF220-215ENST00000487332 VN1R5Q7Z5H4 357 aa9.67□□□□□ -0.86
RNF220-215ENST00000487332 ANKRD37Q7Z713 158 aa9.67□□□□□ -0.86
RNF220-215ENST00000487332 ATCAYQ86WG3 371 aa9.67□□□□□ -0.86
RNF220-215ENST00000487332 IQCKQ8N0W5 287 aa9.67□□□□□ -0.86
RNF220-215ENST00000487332 LGI4Q8N135 537 aa9.67□□□□□ -0.86
RNF220-215ENST00000487332 CA13Q8N1Q1 262 aa9.67□□□□□ -0.86
RNF220-215ENST00000487332 GALNT11Q8NCW6 608 aa9.67□□□□□ -0.86
RNF220-215ENST00000487332 OR5T3Q8NGG3 340 aa9.67□□□□□ -0.86
RNF220-215ENST00000487332 M1APQ8TC57 530 aa9.67□□□□□ -0.86
RNF220-215ENST00000487332 CPT1CQ8TCG5 803 aa9.67□□□□□ -0.86
RNF220-215ENST00000487332 PSMF1Q92530 271 aa9.67□□□□□ -0.86
RNF220-215ENST00000487332 EXT2Q93063 718 aa9.67□□□□□ -0.86
RNF220-215ENST00000487332 PEX11GQ96HA9 241 aa9.67□□□□□ -0.86
RNF220-215ENST00000487332 THOC3Q96J01 351 aaKnown RBP9.67□□□□□ -0.86
RNF220-215ENST00000487332 QRFPRQ96P65 431 aa9.67□□□□□ -0.86
RNF220-215ENST00000487332 SERINC2Q96SA4 455 aa9.67□□□□□ -0.86
RNF220-215ENST00000487332 BARD1Q99728 777 aaKnown RBP9.67□□□□□ -0.86
RNF220-215ENST00000487332 MS4A8Q9BY19 250 aa9.67□□□□□ -0.86
RNF220-215ENST00000487332 TRIM4Q9C037 500 aa9.67□□□□□ -0.86
RNF220-215ENST00000487332 REXO4Q9GZR2 422 aaKnown RBP9.67□□□□□ -0.86
RNF220-215ENST00000487332 MMP25Q9NPA2 562 aa9.67□□□□□ -0.86
RNF220-215ENST00000487332 PRDM9Q9NQV7 894 aa9.67□□□□□ -0.86
RNF220-215ENST00000487332 PSD3Q9NYI0 1048 aa9.67□□□□□ -0.86
RNF220-215ENST00000487332 ASB1Q9Y576 335 aa9.67□□□□□ -0.86
RNF220-215ENST00000487332 PCDHGA10Q9Y5H3 936 aa9.67□□□□□ -0.86
RNF220-215ENST00000487332 TCRBV16S1A1N1A0A5B0 115 aa9.66□□□□□ -0.86
RNF220-215ENST00000487332 CLEC18AA5D8T8 446 aa9.66□□□□□ -0.86
RNF220-215ENST00000487332 ZNF860A6NHJ4 632 aa9.66□□□□□ -0.86
RNF220-215ENST00000487332 TTLL8A6PVC2 850 aa9.66□□□□□ -0.86
RNF220-215ENST00000487332 H0YIV9 168 aa9.66□□□□□ -0.86
RNF220-215ENST00000487332 PSMD12O00232 456 aaPredicted RBP9.66□□□□□ -0.86
RNF220-215ENST00000487332 E2F3O00716 465 aa9.66□□□□□ -0.86
RNF220-215ENST00000487332 ERI3O43414 337 aaKnown RBP9.66□□□□□ -0.86
RNF220-215ENST00000487332 GFAPP14136 432 aa9.66□□□□□ -0.86
RNF220-215ENST00000487332 GCAP28676 217 aa9.66□□□□□ -0.86
RNF220-215ENST00000487332 GMPRP36959 345 aa9.66□□□□□ -0.86
RNF220-215ENST00000487332 PIK3CBP42338 1070 aa9.66□□□□□ -0.86
RNF220-215ENST00000487332 MTTPP55157 894 aa9.66□□□□□ -0.86
RNF220-215ENST00000487332 RAB38P57729 211 aa9.66□□□□□ -0.86
RNF220-215ENST00000487332 RAB8AP61006 207 aa9.66□□□□□ -0.86
RNF220-215ENST00000487332 RAPSNQ13702 412 aa9.66□□□□□ -0.86
RNF220-215ENST00000487332 ABRAXAS2Q15018 415 aa9.66□□□□□ -0.86
RNF220-215ENST00000487332 RASA2Q15283 850 aa9.66□□□□□ -0.86
RNF220-215ENST00000487332 ABHD17CQ6PCB6 329 aa9.66□□□□□ -0.86
RNF220-215ENST00000487332 CLEC18BQ6UXF7 455 aa9.66□□□□□ -0.86
RNF220-215ENST00000487332 LANCL3Q6ZV70 420 aa9.66□□□□□ -0.86
RNF220-215ENST00000487332 SCUBE1Q8IWY4 988 aa9.66□□□□□ -0.86
RNF220-215ENST00000487332 PARP9Q8IXQ6 854 aa9.66□□□□□ -0.86
RNF220-215ENST00000487332 EFCAB3Q8N7B9 438 aa9.66□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 78.3 ms