RNA–Protein interactions for RNA: ENST00000487029.1

SNRNP27-204, Transcript of small nuclear ribonucleoprotein U4/U6.U5 subunit 27, humanhuman

TSL 3

Gene SNRNP27, Length 604 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP27-204ENST00000487029 GRB14Q14449 540 aa3.06□□□□□ -1.92
SNRNP27-204ENST00000487029 LASP1Q14847 261 aaKnown RBP3.06□□□□□ -1.92
SNRNP27-204ENST00000487029 TAB1Q15750 504 aa3.06□□□□□ -1.92
SNRNP27-204ENST00000487029 DUSP5Q16690 384 aa3.06□□□□□ -1.92
SNRNP27-204ENST00000487029 SGSM1Q2NKQ1 1148 aa3.06□□□□□ -1.92
SNRNP27-204ENST00000487029 TMEM30BQ3MIR4 351 aa3.06□□□□□ -1.92
SNRNP27-204ENST00000487029 IFI44LQ53G44 452 aa3.06□□□□□ -1.92
SNRNP27-204ENST00000487029 ADAMTSL4-AS1Q5T5F5 129 aa3.06□□□□□ -1.92
SNRNP27-204ENST00000487029 KCTD11Q693B1 232 aa3.06□□□□□ -1.92
SNRNP27-204ENST00000487029 BHLHB9Q6PI77 547 aa3.06□□□□□ -1.92
SNRNP27-204ENST00000487029 C15orf52Q6ZUT6 534 aaKnown RBP3.06□□□□□ -1.92
SNRNP27-204ENST00000487029 NOTCH2NLQ7Z3S9 236 aa3.06□□□□□ -1.92
SNRNP27-204ENST00000487029 TRMT11Q7Z4G4 463 aaKnown RBP3.06□□□□□ -1.92
SNRNP27-204ENST00000487029 PRSS42Q7Z5A4 293 aa3.06□□□□□ -1.92
SNRNP27-204ENST00000487029 ASPGQ86U10 573 aa3.06□□□□□ -1.92
SNRNP27-204ENST00000487029 CCDC185Q8N715 623 aa3.06□□□□□ -1.92
SNRNP27-204ENST00000487029 SMYD1Q8NB12 490 aa3.06□□□□□ -1.92
SNRNP27-204ENST00000487029 OR5T2Q8NGG2 359 aa3.06□□□□□ -1.92
SNRNP27-204ENST00000487029 OR4D10Q8NGI6 311 aa3.06□□□□□ -1.92
SNRNP27-204ENST00000487029 OR6S1Q8NH40 331 aa3.06□□□□□ -1.92
SNRNP27-204ENST00000487029 RFT1Q96AA3 541 aa3.06□□□□□ -1.92
SNRNP27-204ENST00000487029 ANKRD9Q96BM1 317 aaPredicted RBP3.06□□□□□ -1.92
SNRNP27-204ENST00000487029 ZNF486Q96H40 463 aaPredicted RBP3.06□□□□□ -1.92
SNRNP27-204ENST00000487029 C2orf48Q96LS8 159 aa3.06□□□□□ -1.92
SNRNP27-204ENST00000487029 IL12RB2Q99665 862 aa3.06□□□□□ -1.92
SNRNP27-204ENST00000487029 LITAFQ99732 161 aa3.06□□□□□ -1.92
SNRNP27-204ENST00000487029 ACAT2Q9BWD1 397 aa3.06□□□□□ -1.92
SNRNP27-204ENST00000487029 RBM4Q9BWF3 364 aaKnown RBP3.06□□□□□ -1.92
SNRNP27-204ENST00000487029 ACPTQ9BZG2 426 aa3.06□□□□□ -1.92
SNRNP27-204ENST00000487029 NAPBQ9H115 298 aa3.06□□□□□ -1.92
SNRNP27-204ENST00000487029 MIS18AQ9NYP9 233 aa3.06□□□□□ -1.92
SNRNP27-204ENST00000487029 SATB2Q9UPW6 733 aa3.06□□□□□ -1.92
SNRNP27-204ENST00000487029 PPP1R3CQ9UQK1 317 aa3.06□□□□□ -1.92
SNRNP27-204ENST00000487029 MRPS28Q9Y2Q9 187 aaKnown RBP3.06□□□□□ -1.92
SNRNP27-204ENST00000487029 TMED7Q9Y3B3 224 aa3.06□□□□□ -1.92
SNRNP27-204ENST00000487029 PYGO1Q9Y3Y4 419 aa3.06□□□□□ -1.92
SNRNP27-204ENST00000487029 KNSTRNQ9Y448 316 aa3.06□□□□□ -1.92
SNRNP27-204ENST00000487029 NKX6-3A6NJ46 265 aa3.05□□□□□ -1.92
SNRNP27-204ENST00000487029 ZNF732B4DXR9 585 aa3.05□□□□□ -1.92
SNRNP27-204ENST00000487029 EDIL3O43854 480 aa3.05□□□□□ -1.92
SNRNP27-204ENST00000487029 KERAO60938 352 aa3.05□□□□□ -1.92
SNRNP27-204ENST00000487029 CLN5O75503 358 aa3.05□□□□□ -1.92
SNRNP27-204ENST00000487029 IGLV1-44P01699 117 aa3.05□□□□□ -1.92
SNRNP27-204ENST00000487029 NOVP48745 357 aa3.05□□□□□ -1.92
SNRNP27-204ENST00000487029 CLCN4P51793 760 aa3.05□□□□□ -1.92
SNRNP27-204ENST00000487029 ARF5P84085 180 aa3.05□□□□□ -1.92
SNRNP27-204ENST00000487029 AP1B1Q10567 949 aa3.05□□□□□ -1.92
SNRNP27-204ENST00000487029 MAPK11Q15759 364 aa3.05□□□□□ -1.92
SNRNP27-204ENST00000487029 STXBP2Q15833 593 aa3.05□□□□□ -1.92
SNRNP27-204ENST00000487029 ATP1A1-AS1Q5TC04 95 aa3.05□□□□□ -1.92
SNRNP27-204ENST00000487029 TCEAL6Q6IPX3 200 aa3.05□□□□□ -1.92
SNRNP27-204ENST00000487029 SLC27A4Q6P1M0 643 aa3.05□□□□□ -1.92
SNRNP27-204ENST00000487029 PLBD1Q6P4A8 553 aa3.05□□□□□ -1.92
SNRNP27-204ENST00000487029 TMEM126BQ8IUX1 230 aa3.05□□□□□ -1.92
SNRNP27-204ENST00000487029 ZC3H3Q8IXZ2 948 aaKnown RBP3.05□□□□□ -1.92
SNRNP27-204ENST00000487029 ZNF444Q8N0Y2 327 aaPredicted RBP3.05□□□□□ -1.92
SNRNP27-204ENST00000487029 TEX26Q8N6G2 289 aa3.05□□□□□ -1.92
SNRNP27-204ENST00000487029 RNF149Q8NC42 400 aa3.05□□□□□ -1.92
SNRNP27-204ENST00000487029 MGARPQ8TDB4 240 aa3.05□□□□□ -1.92
SNRNP27-204ENST00000487029 ST7LQ8TDW4 575 aa3.05□□□□□ -1.92
SNRNP27-204ENST00000487029 CHURC1Q8WUH1 139 aa3.05□□□□□ -1.92
SNRNP27-204ENST00000487029 SEPT8Q92599 483 aa3.05□□□□□ -1.92
SNRNP27-204ENST00000487029 CASP10Q92851 521 aa3.05□□□□□ -1.92
SNRNP27-204ENST00000487029 ATP6V0A1Q93050 837 aa3.05□□□□□ -1.92
SNRNP27-204ENST00000487029 SNX21Q969T3 373 aa3.05□□□□□ -1.92
SNRNP27-204ENST00000487029 OMA1Q96E52 524 aa3.05□□□□□ -1.92
SNRNP27-204ENST00000487029 CFAP36Q96G28 342 aa3.05□□□□□ -1.92
SNRNP27-204ENST00000487029 C5orf30Q96GV9 206 aa3.05□□□□□ -1.92
SNRNP27-204ENST00000487029 EPSTI1Q96J88 318 aa3.05□□□□□ -1.92
SNRNP27-204ENST00000487029 LURAP1Q96LR2 239 aa3.05□□□□□ -1.92
SNRNP27-204ENST00000487029 ATP6V0BQ99437 205 aa3.05□□□□□ -1.92
SNRNP27-204ENST00000487029 CLEC7AQ9BXN2 247 aa3.05□□□□□ -1.92
SNRNP27-204ENST00000487029 DBNDD1Q9H9R9 158 aa3.05□□□□□ -1.92
SNRNP27-204ENST00000487029 FGF22Q9HCT0 170 aa3.05□□□□□ -1.92
SNRNP27-204ENST00000487029 PLCXD1Q9NUJ7 323 aa3.05□□□□□ -1.92
SNRNP27-204ENST00000487029 DNAJC11Q9NVH1 559 aa3.05□□□□□ -1.92
SNRNP27-204ENST00000487029 COMMD8Q9NX08 183 aa3.05□□□□□ -1.92
SNRNP27-204ENST00000487029 MAD2L2Q9UI95 211 aa3.05□□□□□ -1.92
SNRNP27-204ENST00000487029 POMT2Q9UKY4 750 aa3.05□□□□□ -1.92
SNRNP27-204ENST00000487029 ZNF510Q9Y2H8 683 aa3.05□□□□□ -1.92
SNRNP27-204ENST00000487029 ANGPTL3Q9Y5C1 460 aa3.05□□□□□ -1.92
SNRNP27-204ENST00000487029 SMAD5-AS1Q9Y6J3 95 aa3.05□□□□□ -1.92
SNRNP27-204ENST00000487029 A0A087X002 238 aa3.04□□□□□ -1.92
SNRNP27-204ENST00000487029 CCDC162PA2VCL2 907 aa3.04□□□□□ -1.92
SNRNP27-204ENST00000487029 C5orf51A6NDU8 294 aa3.04□□□□□ -1.92
SNRNP27-204ENST00000487029 NR5A2O00482 541 aa3.04□□□□□ -1.92
SNRNP27-204ENST00000487029 SURF4O15260 269 aa3.04□□□□□ -1.92
SNRNP27-204ENST00000487029 MLNRO43193 412 aa3.04□□□□□ -1.92
SNRNP27-204ENST00000487029 MAGEC1O60732 1142 aa3.04□□□□□ -1.92
SNRNP27-204ENST00000487029 NXPH2O95156 264 aa3.04□□□□□ -1.92
SNRNP27-204ENST00000487029 OLFM2O95897 454 aa3.04□□□□□ -1.92
SNRNP27-204ENST00000487029 HMOX1P09601 288 aa3.04□□□□□ -1.92
SNRNP27-204ENST00000487029 CPA3P15088 417 aa3.04□□□□□ -1.92
SNRNP27-204ENST00000487029 ZNF26P17031 533 aaPredicted RBP3.04□□□□□ -1.92
SNRNP27-204ENST00000487029 CTNNA2P26232 953 aa3.04□□□□□ -1.92
SNRNP27-204ENST00000487029 SLC1A3P43003 542 aa3.04□□□□□ -1.92
SNRNP27-204ENST00000487029 TSFMP43897 325 aaKnown RBP3.04□□□□□ -1.92
SNRNP27-204ENST00000487029 LCP2Q13094 533 aa3.04□□□□□ -1.92
SNRNP27-204ENST00000487029 HLA-BQ31612 363 aa3.04□□□□□ -1.92
SNRNP27-204ENST00000487029 ZFP69Q49AA0 526 aa3.04□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms