RNA–Protein interactions for RNA: ENST00000486941.1

SNRNP40-205, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 2

Gene SNRNP40, Length 743 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-205ENST00000486941 MAZP56270 477 aaKnown RBP3.88□□□□□ -1.79
SNRNP40-205ENST00000486941 POLE2P56282 527 aa3.88□□□□□ -1.79
SNRNP40-205ENST00000486941 CDK3Q00526 305 aa3.88□□□□□ -1.79
SNRNP40-205ENST00000486941 OGDHQ02218 1023 aa3.88□□□□□ -1.79
SNRNP40-205ENST00000486941 EGR4Q05215 589 aa3.88□□□□□ -1.79
SNRNP40-205ENST00000486941 BIRC2Q13490 618 aa3.88□□□□□ -1.79
SNRNP40-205ENST00000486941 ATP1A4Q13733 1029 aa3.88□□□□□ -1.79
SNRNP40-205ENST00000486941 KRT31Q15323 416 aa3.88□□□□□ -1.79
SNRNP40-205ENST00000486941 SYCP1Q15431 976 aa3.88□□□□□ -1.79
SNRNP40-205ENST00000486941 DCAF12Q5T6F0 453 aa3.88□□□□□ -1.79
SNRNP40-205ENST00000486941 ERMARDQ5T6L9 678 aa3.88□□□□□ -1.79
SNRNP40-205ENST00000486941 ACAD10Q6JQN1 1059 aa3.88□□□□□ -1.79
SNRNP40-205ENST00000486941 PPP1R2P3Q6NXS1 205 aa3.88□□□□□ -1.79
SNRNP40-205ENST00000486941 DNAJC24Q6P3W2 148 aa3.88□□□□□ -1.79
SNRNP40-205ENST00000486941 TLDC1Q6P9B6 456 aa3.88□□□□□ -1.79
SNRNP40-205ENST00000486941 DCUN1D2Q6PH85 259 aa3.88□□□□□ -1.79
SNRNP40-205ENST00000486941 WDR74Q6RFH5 385 aaPredicted RBP3.88□□□□□ -1.79
SNRNP40-205ENST00000486941 ARHGAP22Q7Z5H3 698 aa3.88□□□□□ -1.79
SNRNP40-205ENST00000486941 HEATR4Q86WZ0 1026 aa3.88□□□□□ -1.79
SNRNP40-205ENST00000486941 PSTKQ8IV42 348 aaKnown RBP3.88□□□□□ -1.79
SNRNP40-205ENST00000486941 ARHGAP12Q8IWW6 846 aa3.88□□□□□ -1.79
SNRNP40-205ENST00000486941 MCOLN2Q8IZK6 566 aa3.88□□□□□ -1.79
SNRNP40-205ENST00000486941 CACNA2D3Q8IZS8 1091 aa3.88□□□□□ -1.79
SNRNP40-205ENST00000486941 NAGSQ8N159 534 aa3.88□□□□□ -1.79
SNRNP40-205ENST00000486941 PAF1Q8N7H5 531 aa3.88□□□□□ -1.79
SNRNP40-205ENST00000486941 BMPERQ8N8U9 685 aa3.88□□□□□ -1.79
SNRNP40-205ENST00000486941 NPIPB3Q92617 1050 aa3.88□□□□□ -1.79
SNRNP40-205ENST00000486941 ART4Q93070 314 aa3.88□□□□□ -1.79
SNRNP40-205ENST00000486941 KIAA1143Q96AT1 154 aaPredicted RBP3.88□□□□□ -1.79
SNRNP40-205ENST00000486941 NUS1Q96E22 293 aa3.88□□□□□ -1.79
SNRNP40-205ENST00000486941 PHF21BQ96EK2 531 aa3.88□□□□□ -1.79
SNRNP40-205ENST00000486941 DTD2Q96FN9 168 aa3.88□□□□□ -1.79
SNRNP40-205ENST00000486941 SCRN2Q96FV2 425 aa3.88□□□□□ -1.79
SNRNP40-205ENST00000486941 CELF6Q96J87 481 aaKnown RBP3.88□□□□□ -1.79
SNRNP40-205ENST00000486941 SLC45A3Q96JT2 553 aa3.88□□□□□ -1.79
SNRNP40-205ENST00000486941 NSMCE3Q96MG7 304 aa3.88□□□□□ -1.79
SNRNP40-205ENST00000486941 ZNF599Q96NL3 588 aa3.88□□□□□ -1.79
SNRNP40-205ENST00000486941 MCEEQ96PE7 176 aa3.88□□□□□ -1.79
SNRNP40-205ENST00000486941 NUDCD1Q96RS6 583 aa3.88□□□□□ -1.79
SNRNP40-205ENST00000486941 AGPAT1Q99943 283 aa3.88□□□□□ -1.79
SNRNP40-205ENST00000486941 FRMD8Q9BZ67 464 aaPredicted RBP3.88□□□□□ -1.79
SNRNP40-205ENST00000486941 UNKQ9C0B0 810 aaKnown RBP3.88□□□□□ -1.79
SNRNP40-205ENST00000486941 CLSTN2Q9H4D0 955 aa3.88□□□□□ -1.79
SNRNP40-205ENST00000486941 DHX35Q9H5Z1 703 aaKnown RBP3.88□□□□□ -1.79
SNRNP40-205ENST00000486941 PLAC1Q9HBJ0 212 aa3.88□□□□□ -1.79
SNRNP40-205ENST00000486941 NLRC4Q9NPP4 1024 aa3.88□□□□□ -1.79
SNRNP40-205ENST00000486941 FBXO8Q9NRD0 319 aa3.88□□□□□ -1.79
SNRNP40-205ENST00000486941 FAM207AQ9NSI2 230 aaPredicted RBP3.88□□□□□ -1.79
SNRNP40-205ENST00000486941 OCIAD1Q9NX40 245 aa3.88□□□□□ -1.79
SNRNP40-205ENST00000486941 TAB2Q9NYJ8 693 aa3.88□□□□□ -1.79
SNRNP40-205ENST00000486941 PILRAQ9UKJ1 303 aa3.88□□□□□ -1.79
SNRNP40-205ENST00000486941 PHTF1Q9UMS5 762 aa3.88□□□□□ -1.79
SNRNP40-205ENST00000486941 SUFUQ9UMX1 484 aa3.88□□□□□ -1.79
SNRNP40-205ENST00000486941 G3BP2Q9UN86 482 aaKnown RBP3.88□□□□□ -1.79
SNRNP40-205ENST00000486941 SLC17A4Q9Y2C5 497 aa3.88□□□□□ -1.79
SNRNP40-205ENST00000486941 PPIL1Q9Y3C6 166 aa3.88□□□□□ -1.79
SNRNP40-205ENST00000486941 PTGDR2Q9Y5Y4 395 aa3.88□□□□□ -1.79
SNRNP40-205ENST00000486941 SPTBP11277 2137 aa3.88□□□□□ -1.79
SNRNP40-205ENST00000486941 BSNQ9UPA5 3926 aa3.88□□□□□ -1.79
SNRNP40-205ENST00000486941 CENPEQ02224 2701 aa3.87□□□□□ -1.79
SNRNP40-205ENST00000486941 MYO9AB2RTY4 2548 aa3.87□□□□□ -1.79
SNRNP40-205ENST00000486941 CNTRLQ7Z7A1 2325 aa3.87□□□□□ -1.79
SNRNP40-205ENST00000486941 PRRC2CQ9Y520 2896 aaKnown RBP3.87□□□□□ -1.79
SNRNP40-205ENST00000486941 A0A1B0GUV1 79 aa3.87□□□□□ -1.79
SNRNP40-205ENST00000486941 EFCAB7A8K855 629 aa3.87□□□□□ -1.79
SNRNP40-205ENST00000486941 FOXO6A8MYZ6 492 aa3.87□□□□□ -1.79
SNRNP40-205ENST00000486941 DFFAO00273 331 aa3.87□□□□□ -1.79
SNRNP40-205ENST00000486941 EPHB6O15197 1021 aa3.87□□□□□ -1.79
SNRNP40-205ENST00000486941 NKX2-8O15522 239 aa3.87□□□□□ -1.79
SNRNP40-205ENST00000486941 CCNT2O60583 730 aaKnown RBP3.87□□□□□ -1.79
SNRNP40-205ENST00000486941 RAD1O60671 282 aa3.87□□□□□ -1.79
SNRNP40-205ENST00000486941 COQ9O75208 318 aa3.87□□□□□ -1.79
SNRNP40-205ENST00000486941 IGKV3-20P01619 116 aa3.87□□□□□ -1.79
SNRNP40-205ENST00000486941 CCDC172P0C7W6 258 aa3.87□□□□□ -1.79
SNRNP40-205ENST00000486941 ATP1A3P13637 1013 aa3.87□□□□□ -1.79
SNRNP40-205ENST00000486941 FERP16591 822 aa3.87□□□□□ -1.79
SNRNP40-205ENST00000486941 LHCGRP22888 699 aa3.87□□□□□ -1.79
SNRNP40-205ENST00000486941 PSMA2P25787 234 aa3.87□□□□□ -1.79
SNRNP40-205ENST00000486941 MIPP30301 263 aa3.87□□□□□ -1.79
SNRNP40-205ENST00000486941 ACTR1BP42025 376 aa3.87□□□□□ -1.79
SNRNP40-205ENST00000486941 GPR1P46091 355 aa3.87□□□□□ -1.79
SNRNP40-205ENST00000486941 GNPDA1P46926 289 aa3.87□□□□□ -1.79
SNRNP40-205ENST00000486941 SLC37A1P57057 533 aa3.87□□□□□ -1.79
SNRNP40-205ENST00000486941 ACTR1AP61163 376 aa3.87□□□□□ -1.79
SNRNP40-205ENST00000486941 MC1RQ01726 317 aa3.87□□□□□ -1.79
SNRNP40-205ENST00000486941 CRYZQ08257 329 aaKnown RBP3.87□□□□□ -1.79
SNRNP40-205ENST00000486941 SLC10A7Q0GE19 358 aa3.87□□□□□ -1.79
SNRNP40-205ENST00000486941 GPS2Q13227 327 aa3.87□□□□□ -1.79
SNRNP40-205ENST00000486941 MAMLD1Q13495 774 aa3.87□□□□□ -1.79
SNRNP40-205ENST00000486941 DPYSQ14117 519 aa3.87□□□□□ -1.79
SNRNP40-205ENST00000486941 ZNF235Q14590 738 aa3.87□□□□□ -1.79
SNRNP40-205ENST00000486941 IGFBP7Q16270 282 aa3.87□□□□□ -1.79
SNRNP40-205ENST00000486941 CA9Q16790 459 aa3.87□□□□□ -1.79
SNRNP40-205ENST00000486941 PYCR3Q53H96 274 aa3.87□□□□□ -1.79
SNRNP40-205ENST00000486941 PPP6R3Q5H9R7 873 aaPredicted RBP3.87□□□□□ -1.79
SNRNP40-205ENST00000486941 CHCHD2P9Q5T1J5 151 aaPredicted RBP3.87□□□□□ -1.79
SNRNP40-205ENST00000486941 NKAIN2Q5VXU1 208 aa3.87□□□□□ -1.79
SNRNP40-205ENST00000486941 RAET1GQ6H3X3 334 aa3.87□□□□□ -1.79
SNRNP40-205ENST00000486941 PLEKHA7Q6IQ23 1121 aa3.87□□□□□ -1.79
SNRNP40-205ENST00000486941 SLC30A9Q6PML9 568 aa3.87□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms