RNA–Protein interactions for RNA: ENST00000486927.1

ATL2-215, Transcript of atlastin GTPase 2, human

TSL 4

Gene ATL2, Length 553 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ATL2-215	ENST00000486927	RFC3	P40938	356 aa		11.91	□□□□□ -0.5
ATL2-215	ENST00000486927	CCR8	P51685	355 aa		11.91	□□□□□ -0.5
ATL2-215	ENST00000486927	OLR1	P78380	273 aa		11.91	□□□□□ -0.5
ATL2-215	ENST00000486927	SARNP	P82979	210 aa	Known RBP	11.91	□□□□□ -0.5
ATL2-215	ENST00000486927	GSTA5	Q7RTV2	222 aa		11.91	□□□□□ -0.5
ATL2-215	ENST00000486927	TGIF2LY	Q8IUE0	185 aa		11.91	□□□□□ -0.5
ATL2-215	ENST00000486927	CYP4X1	Q8N118	509 aa		11.91	□□□□□ -0.5
ATL2-215	ENST00000486927	OR56A3	Q8NH54	315 aa		11.91	□□□□□ -0.5
ATL2-215	ENST00000486927	UTP15	Q8TED0	518 aa	Known RBP	11.91	□□□□□ -0.5
ATL2-215	ENST00000486927	NRGN	Q92686	78 aa		11.91	□□□□□ -0.5
ATL2-215	ENST00000486927	NINJ1	Q92982	152 aa		11.91	□□□□□ -0.5
ATL2-215	ENST00000486927	OR4K3	Q96R72	315 aa		11.91	□□□□□ -0.5
ATL2-215	ENST00000486927	DESI2	Q9BSY9	194 aa		11.91	□□□□□ -0.5
ATL2-215	ENST00000486927	HAUS8	Q9BT25	410 aa		11.91	□□□□□ -0.5
ATL2-215	ENST00000486927	AARSD1	Q9BTE6	412 aa	Known RBP	11.91	□□□□□ -0.5
ATL2-215	ENST00000486927	CCDC68	Q9H2F9	335 aa		11.91	□□□□□ -0.5
ATL2-215	ENST00000486927	NECTIN3	Q9NQS3	549 aa		11.91	□□□□□ -0.5
ATL2-215	ENST00000486927	PRDM9	Q9NQV7	894 aa		11.91	□□□□□ -0.5
ATL2-215	ENST00000486927	ZFAT	Q9P243	1243 aa		11.91	□□□□□ -0.5
ATL2-215	ENST00000486927	ZFP69B	Q9UJL9	534 aa		11.91	□□□□□ -0.5
ATL2-215	ENST00000486927	TMEM200C	A6NKL6	621 aa		11.9	□□□□□ -0.5
ATL2-215	ENST00000486927	NDUFS4	O43181	175 aa		11.9	□□□□□ -0.5
ATL2-215	ENST00000486927	CEP104	O60308	925 aa		11.9	□□□□□ -0.5
ATL2-215	ENST00000486927	CDC40	O60508	579 aa	Known RBP eCLIP	11.9	□□□□□ -0.5
ATL2-215	ENST00000486927	MAOA	P21397	527 aa		11.9	□□□□□ -0.5
ATL2-215	ENST00000486927	AHR	P35869	848 aa		11.9	□□□□□ -0.5
ATL2-215	ENST00000486927	SLC1A2	P43004	574 aa		11.9	□□□□□ -0.5
ATL2-215	ENST00000486927	SCTR	P47872	440 aa		11.9	□□□□□ -0.5
ATL2-215	ENST00000486927	CLCN2	P51788	898 aa		11.9	□□□□□ -0.5
ATL2-215	ENST00000486927	NUP107	P57740	925 aa		11.9	□□□□□ -0.5
ATL2-215	ENST00000486927	SKP1	P63208	163 aa		11.9	□□□□□ -0.5
ATL2-215	ENST00000486927	HYAL2	Q12891	473 aa		11.9	□□□□□ -0.5
ATL2-215	ENST00000486927	THOC5	Q13769	683 aa	Known RBP	11.9	□□□□□ -0.5
ATL2-215	ENST00000486927	TERF2	Q15554	542 aa		11.9	□□□□□ -0.5
ATL2-215	ENST00000486927	PHKG1	Q16816	387 aa		11.9	□□□□□ -0.5
ATL2-215	ENST00000486927	KCTD19	Q17RG1	926 aa	Predicted RBP	11.9	□□□□□ -0.5
ATL2-215	ENST00000486927	DUPD1	Q68J44	220 aa		11.9	□□□□□ -0.5
ATL2-215	ENST00000486927	LRRC8E	Q6NSJ5	796 aa		11.9	□□□□□ -0.5
ATL2-215	ENST00000486927	PAOX	Q6QHF9	649 aa		11.9	□□□□□ -0.5
ATL2-215	ENST00000486927	MBOAT1	Q6ZNC8	495 aa		11.9	□□□□□ -0.5
ATL2-215	ENST00000486927	CPAMD8	Q8IZJ3	1885 aa		11.9	□□□□□ -0.5
ATL2-215	ENST00000486927	MCU	Q8NE86	351 aa		11.9	□□□□□ -0.5
ATL2-215	ENST00000486927	B3GNT7	Q8NFL0	401 aa		11.9	□□□□□ -0.5
ATL2-215	ENST00000486927	SEC16B	Q96JE7	1060 aa		11.9	□□□□□ -0.5
ATL2-215	ENST00000486927	DEFB127	Q9H1M4	99 aa		11.9	□□□□□ -0.5
ATL2-215	ENST00000486927	ZDHHC11	Q9H8X9	412 aa		11.9	□□□□□ -0.5
ATL2-215	ENST00000486927	DEPP	Q9NTK1	212 aa		11.9	□□□□□ -0.5
ATL2-215	ENST00000486927	ZNF223	Q9UK11	482 aa	Predicted RBP	11.9	□□□□□ -0.5
ATL2-215	ENST00000486927	FBXO5	Q9UKT4	447 aa		11.9	□□□□□ -0.5
ATL2-215	ENST00000486927		A0A1B0GVC2	190 aa		11.89	□□□□□ -0.51
ATL2-215	ENST00000486927	CTAGE15	A4D2H0	777 aa		11.89	□□□□□ -0.51
ATL2-215	ENST00000486927	ITGA10	O75578	1167 aa		11.89	□□□□□ -0.51
ATL2-215	ENST00000486927	CTAG2	O75638	210 aa		11.89	□□□□□ -0.51
ATL2-215	ENST00000486927	FAM155B	O75949	473 aa		11.89	□□□□□ -0.51
ATL2-215	ENST00000486927	HIST1H2AG	P0C0S8	130 aa	Predicted RBP	11.89	□□□□□ -0.51
ATL2-215	ENST00000486927	ZNF888	P0CJ79	500 aa	Predicted RBP	11.89	□□□□□ -0.51
ATL2-215	ENST00000486927	HIST1H2AD	P20671	130 aa		11.89	□□□□□ -0.51
ATL2-215	ENST00000486927	DLX5	P56178	289 aa		11.89	□□□□□ -0.51
ATL2-215	ENST00000486927	SP140	Q13342	867 aa		11.89	□□□□□ -0.51
ATL2-215	ENST00000486927	XKR6	Q5GH73	641 aa		11.89	□□□□□ -0.51
ATL2-215	ENST00000486927	CATSPERE	Q5SY80	951 aa		11.89	□□□□□ -0.51
ATL2-215	ENST00000486927	ANKRD22	Q5VYY1	191 aa		11.89	□□□□□ -0.51
ATL2-215	ENST00000486927	UGT3A1	Q6NUS8	523 aa		11.89	□□□□□ -0.51
ATL2-215	ENST00000486927	CASC4	Q6P4E1	433 aa		11.89	□□□□□ -0.51
ATL2-215	ENST00000486927	PAQR3	Q6TCH7	311 aa		11.89	□□□□□ -0.51
ATL2-215	ENST00000486927	RGS9BP	Q6ZS82	235 aa		11.89	□□□□□ -0.51
ATL2-215	ENST00000486927	ABHD13	Q7L211	337 aa		11.89	□□□□□ -0.51
ATL2-215	ENST00000486927	CTAGE6	Q86UF2	777 aa		11.89	□□□□□ -0.51
ATL2-215	ENST00000486927	CLYBL	Q8N0X4	340 aa		11.89	□□□□□ -0.51
ATL2-215	ENST00000486927	AGGF1	Q8N302	714 aa	eCLIP	11.89	□□□□□ -0.51
ATL2-215	ENST00000486927	TMEM156	Q8N614	296 aa		11.89	□□□□□ -0.51
ATL2-215	ENST00000486927	CHDH	Q8NE62	594 aa	Predicted RBP	11.89	□□□□□ -0.51
ATL2-215	ENST00000486927	HIST1H2AH	Q96KK5	128 aa		11.89	□□□□□ -0.51
ATL2-215	ENST00000486927	HIST1H2AJ	Q99878	128 aa		11.89	□□□□□ -0.51
ATL2-215	ENST00000486927	TTYH2	Q9BSA4	534 aa		11.89	□□□□□ -0.51
ATL2-215	ENST00000486927	H2AFJ	Q9BTM1	129 aa		11.89	□□□□□ -0.51
ATL2-215	ENST00000486927	SLC6A16	Q9GZN6	736 aa		11.89	□□□□□ -0.51
ATL2-215	ENST00000486927	TIMMDC1	Q9NPL8	285 aa		11.89	□□□□□ -0.51
ATL2-215	ENST00000486927	HOMER3	Q9NSC5	361 aa		11.89	□□□□□ -0.51
ATL2-215	ENST00000486927	YARS2	Q9Y2Z4	477 aa	Known RBP	11.89	□□□□□ -0.51
ATL2-215	ENST00000486927	CLDN16	Q9Y5I7	305 aa		11.89	□□□□□ -0.51
ATL2-215	ENST00000486927	PINLYP	A6NC86	204 aa		11.88	□□□□□ -0.51
ATL2-215	ENST00000486927	OR14I1	A6ND48	311 aa		11.88	□□□□□ -0.51
ATL2-215	ENST00000486927	FAM90A27P	A6NNH2	459 aa		11.88	□□□□□ -0.51
ATL2-215	ENST00000486927		A8MUA0	341 aa		11.88	□□□□□ -0.51
ATL2-215	ENST00000486927	GLS	O94925	669 aa	Predicted RBP	11.88	□□□□□ -0.51
ATL2-215	ENST00000486927	FGG	P02679	453 aa		11.88	□□□□□ -0.51
ATL2-215	ENST00000486927	RNH1	P13489	461 aa	Known RBP	11.88	□□□□□ -0.51
ATL2-215	ENST00000486927	FOSL1	P15407	271 aa		11.88	□□□□□ -0.51
ATL2-215	ENST00000486927	KLK2	P20151	261 aa		11.88	□□□□□ -0.51
ATL2-215	ENST00000486927	GABRB3	P28472	473 aa		11.88	□□□□□ -0.51
ATL2-215	ENST00000486927	GPR85	P60893	370 aa		11.88	□□□□□ -0.51
ATL2-215	ENST00000486927	RAB8A	P61006	207 aa		11.88	□□□□□ -0.51
ATL2-215	ENST00000486927	PPIA	P62937	165 aa	Known RBP	11.88	□□□□□ -0.51
ATL2-215	ENST00000486927	RGS1	Q08116	209 aa		11.88	□□□□□ -0.51
ATL2-215	ENST00000486927	DHX9	Q08211	1270 aa	Known RBP	11.88	□□□□□ -0.51
ATL2-215	ENST00000486927	TRIP13	Q15645	432 aa	Predicted RBP	11.88	□□□□□ -0.51
ATL2-215	ENST00000486927	RTL6	Q6ICC9	239 aa		11.88	□□□□□ -0.51
ATL2-215	ENST00000486927	TMEM200A	Q86VY9	491 aa		11.88	□□□□□ -0.51
ATL2-215	ENST00000486927	LIX1L	Q8IVB5	337 aa		11.88	□□□□□ -0.51

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