RNA–Protein interactions for RNA: ENST00000486724.5

APTX-228, Transcript of aprataxin, humanhuman

TSL 4

Gene APTX, Length 556 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-228ENST00000486724 EFTUD2Q15029 972 aaKnown RBP eCLIP8.04□□□□□ -1.12
APTX-228ENST00000486724 PDPK2PQ6A1A2 396 aa8.04□□□□□ -1.12
APTX-228ENST00000486724 NEPROQ6NW34 567 aa8.04□□□□□ -1.12
APTX-228ENST00000486724 TRMT10BQ6PF06 316 aaKnown RBP8.04□□□□□ -1.12
APTX-228ENST00000486724 CES3Q6UWW8 571 aa8.04□□□□□ -1.12
APTX-228ENST00000486724 IZUMO2Q6UXV1 221 aa8.04□□□□□ -1.12
APTX-228ENST00000486724 NAPRTQ6XQN6 538 aa8.04□□□□□ -1.12
APTX-228ENST00000486724 USP45Q70EL2 814 aa8.04□□□□□ -1.12
APTX-228ENST00000486724 CHSY3Q70JA7 882 aa8.04□□□□□ -1.12
APTX-228ENST00000486724 PDSS2Q86YH6 399 aa8.04□□□□□ -1.12
APTX-228ENST00000486724 CLYBLQ8N0X4 340 aa8.04□□□□□ -1.12
APTX-228ENST00000486724 NDUFAF2Q8N183 169 aa8.04□□□□□ -1.12
APTX-228ENST00000486724 ANKRD42Q8N9B4 389 aa8.04□□□□□ -1.12
APTX-228ENST00000486724 OR13J1Q8NGT2 312 aa8.04□□□□□ -1.12
APTX-228ENST00000486724 OR1L3Q8NH93 324 aa8.04□□□□□ -1.12
APTX-228ENST00000486724 MGARPQ8TDB4 240 aa8.04□□□□□ -1.12
APTX-228ENST00000486724 STYXQ8WUJ0 223 aa8.04□□□□□ -1.12
APTX-228ENST00000486724 SLC44A1Q8WWI5 657 aa8.04□□□□□ -1.12
APTX-228ENST00000486724 ASB5Q8WWX0 329 aa8.04□□□□□ -1.12
APTX-228ENST00000486724 SREK1Q8WXA9 508 aaKnown RBP8.04□□□□□ -1.12
APTX-228ENST00000486724 JADE3Q92613 823 aa8.04□□□□□ -1.12
APTX-228ENST00000486724 CDKL2Q92772 493 aa8.04□□□□□ -1.12
APTX-228ENST00000486724 SCAMP4Q969E2 229 aa8.04□□□□□ -1.12
APTX-228ENST00000486724 ZNF778Q96MU6 729 aa8.04□□□□□ -1.12
APTX-228ENST00000486724 SECISBP2Q96T21 854 aaKnown RBP8.04□□□□□ -1.12
APTX-228ENST00000486724 PAFAH2Q99487 392 aa8.04□□□□□ -1.12
APTX-228ENST00000486724 HAUS8Q9BT25 410 aa8.04□□□□□ -1.12
APTX-228ENST00000486724 RNF32Q9H0A6 362 aa8.04□□□□□ -1.12
APTX-228ENST00000486724 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP8.04□□□□□ -1.12
APTX-228ENST00000486724 CCDC68Q9H2F9 335 aa8.04□□□□□ -1.12
APTX-228ENST00000486724 SYTL2Q9HCH5 934 aa8.04□□□□□ -1.12
APTX-228ENST00000486724 PFDN4Q9NQP4 134 aa8.04□□□□□ -1.12
APTX-228ENST00000486724 RASSF1Q9NS23 344 aa8.04□□□□□ -1.12
APTX-228ENST00000486724 UBAP1Q9NZ09 502 aa8.04□□□□□ -1.12
APTX-228ENST00000486724 IL17CQ9P0M4 197 aa8.04□□□□□ -1.12
APTX-228ENST00000486724 IFT80Q9P2H3 777 aaPredicted RBP8.04□□□□□ -1.12
APTX-228ENST00000486724 TRPS1Q9UHF7 1281 aa8.04□□□□□ -1.12
APTX-228ENST00000486724 ZNF711Q9Y462 761 aa8.04□□□□□ -1.12
APTX-228ENST00000486724 SONP18583 2426 aaKnown RBP8.04□□□□□ -1.12
APTX-228ENST00000486724 ANK3Q12955 4377 aaKnown RBP8.03□□□□□ -1.12
APTX-228ENST00000486724 SMIM23A6NLE4 172 aa8.03□□□□□ -1.12
APTX-228ENST00000486724 OR52A4PA6NMU1 304 aa8.03□□□□□ -1.12
APTX-228ENST00000486724 C2orf81A6NN90 581 aa8.03□□□□□ -1.12
APTX-228ENST00000486724 CXorf49A8MYA2 514 aaPredicted RBP8.03□□□□□ -1.12
APTX-228ENST00000486724 E7EQ34 232 aa8.03□□□□□ -1.12
APTX-228ENST00000486724 H3BNX3 289 aa8.03□□□□□ -1.12
APTX-228ENST00000486724 ADAM10O14672 748 aa8.03□□□□□ -1.12
APTX-228ENST00000486724 DENRO43583 198 aaKnown RBP8.03□□□□□ -1.12
APTX-228ENST00000486724 SERPINB7O75635 380 aa8.03□□□□□ -1.12
APTX-228ENST00000486724 TRMUO75648 421 aaKnown RBP8.03□□□□□ -1.12
APTX-228ENST00000486724 TOXO94900 526 aa8.03□□□□□ -1.12
APTX-228ENST00000486724 TSPAN12O95859 305 aa8.03□□□□□ -1.12
APTX-228ENST00000486724 CLPTM1O96005 669 aa8.03□□□□□ -1.12
APTX-228ENST00000486724 PIRTP0C851 137 aa8.03□□□□□ -1.12
APTX-228ENST00000486724 MSL3P1P0C860 447 aa8.03□□□□□ -1.12
APTX-228ENST00000486724 ZNF30P17039 623 aa8.03□□□□□ -1.12
APTX-228ENST00000486724 MMP11P24347 488 aa8.03□□□□□ -1.12
APTX-228ENST00000486724 ARNTP27540 789 aa8.03□□□□□ -1.12
APTX-228ENST00000486724 CHRNB4P30926 498 aa8.03□□□□□ -1.12
APTX-228ENST00000486724 HALP42357 657 aa8.03□□□□□ -1.12
APTX-228ENST00000486724 HSPA13P48723 471 aa8.03□□□□□ -1.12
APTX-228ENST00000486724 TRPC1P48995 793 aa8.03□□□□□ -1.12
APTX-228ENST00000486724 TMED10P49755 219 aaKnown RBP8.03□□□□□ -1.12
APTX-228ENST00000486724 CTSCP53634 463 aa8.03□□□□□ -1.12
APTX-228ENST00000486724 NR1H2P55055 460 aa8.03□□□□□ -1.12
APTX-228ENST00000486724 NKX6-1P78426 367 aaPredicted RBP8.03□□□□□ -1.12
APTX-228ENST00000486724 RELAQ04206 551 aa8.03□□□□□ -1.12
APTX-228ENST00000486724 CACNG1Q06432 222 aa8.03□□□□□ -1.12
APTX-228ENST00000486724 KRTCAP3Q53RY4 240 aa8.03□□□□□ -1.12
APTX-228ENST00000486724 DEPDC1Q5TB30 811 aa8.03□□□□□ -1.12
APTX-228ENST00000486724 C3P1Q6ZMU1 363 aa8.03□□□□□ -1.12
APTX-228ENST00000486724 RFLNAQ6ZTI6 216 aa8.03□□□□□ -1.12
APTX-228ENST00000486724 CLNKQ7Z7G1 428 aa8.03□□□□□ -1.12
APTX-228ENST00000486724 TSPAN33Q86UF1 283 aa8.03□□□□□ -1.12
APTX-228ENST00000486724 NLRP8Q86W28 1048 aa8.03□□□□□ -1.12
APTX-228ENST00000486724 SLC26A11Q86WA9 606 aa8.03□□□□□ -1.12
APTX-228ENST00000486724 LRRC6Q86X45 466 aa8.03□□□□□ -1.12
APTX-228ENST00000486724 CDC20BQ86Y33 519 aa8.03□□□□□ -1.12
APTX-228ENST00000486724 CNTN4Q8IWV2 1026 aa8.03□□□□□ -1.12
APTX-228ENST00000486724 CIARTQ8N365 385 aaPredicted RBP8.03□□□□□ -1.12
APTX-228ENST00000486724 CPSF7Q8N684 471 aaKnown RBP8.03□□□□□ -1.12
APTX-228ENST00000486724 OR6Y1Q8NGX8 325 aa8.03□□□□□ -1.12
APTX-228ENST00000486724 LILRB4Q8NHJ6 448 aa8.03□□□□□ -1.12
APTX-228ENST00000486724 DCAKDQ8WVC6 231 aa8.03□□□□□ -1.12
APTX-228ENST00000486724 PTCD3Q96EY7 689 aaKnown RBP8.03□□□□□ -1.12
APTX-228ENST00000486724 SCRN2Q96FV2 425 aa8.03□□□□□ -1.12
APTX-228ENST00000486724 MS4A3Q96HJ5 214 aa8.03□□□□□ -1.12
APTX-228ENST00000486724 LRGUKQ96M69 825 aa8.03□□□□□ -1.12
APTX-228ENST00000486724 GPR137Q96N19 417 aa8.03□□□□□ -1.12
APTX-228ENST00000486724 AGAP2Q99490 1192 aa8.03□□□□□ -1.12
APTX-228ENST00000486724 KLHL4Q9C0H6 718 aa8.03□□□□□ -1.12
APTX-228ENST00000486724 SMYD2Q9NRG4 433 aa8.03□□□□□ -1.12
APTX-228ENST00000486724 C20orf96Q9NUD7 363 aaPredicted RBP8.03□□□□□ -1.12
APTX-228ENST00000486724 TBC1D23Q9NUY8 699 aa8.03□□□□□ -1.12
APTX-228ENST00000486724 NLE1Q9NVX2 485 aaPredicted RBP8.03□□□□□ -1.12
APTX-228ENST00000486724 NSMCE4AQ9NXX6 385 aa8.03□□□□□ -1.12
APTX-228ENST00000486724 PSMC3IPQ9P2W1 217 aaPredicted RBP8.03□□□□□ -1.12
APTX-228ENST00000486724 SLC2A6Q9UGQ3 507 aa8.03□□□□□ -1.12
APTX-228ENST00000486724 ZNF180Q9UJW8 692 aa8.03□□□□□ -1.12
APTX-228ENST00000486724 SERTAD3Q9UJW9 196 aa8.03□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms