RNA–Protein interactions for RNA: ENST00000486665.5

HDAC6-229, Transcript of histone deacetylase 6, humanhuman

TSL 2

Gene HDAC6, Length 598 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-229ENST00000486665 ITGA1P56199 1179 aa12.15□□□□□ -0.46
HDAC6-229ENST00000486665 ZNF33BQ06732 778 aa12.15□□□□□ -0.46
HDAC6-229ENST00000486665 RGS1Q08116 209 aa12.15□□□□□ -0.46
HDAC6-229ENST00000486665 TBL3Q12788 808 aaKnown RBP12.15□□□□□ -0.46
HDAC6-229ENST00000486665 CSTF3Q12996 717 aaKnown RBP12.15□□□□□ -0.46
HDAC6-229ENST00000486665 ADPRMQ3LIE5 342 aa12.15□□□□□ -0.46
HDAC6-229ENST00000486665 SLC9B1Q4ZJI4 515 aa12.15□□□□□ -0.46
HDAC6-229ENST00000486665 XKR7Q5GH72 579 aa12.15□□□□□ -0.46
HDAC6-229ENST00000486665 TCTE1Q5JU00 501 aa12.15□□□□□ -0.46
HDAC6-229ENST00000486665 MANEAQ5SRI9 462 aa12.15□□□□□ -0.46
HDAC6-229ENST00000486665 C10orf62Q5T681 223 aaPredicted RBP12.15□□□□□ -0.46
HDAC6-229ENST00000486665 KHDRBS2Q5VWX1 349 aaKnown RBP12.15□□□□□ -0.46
HDAC6-229ENST00000486665 TMEM214Q6NUQ4 689 aaKnown RBP12.15□□□□□ -0.46
HDAC6-229ENST00000486665 EPGNQ6UW88 154 aa12.15□□□□□ -0.46
HDAC6-229ENST00000486665 MTERF4Q7Z6M4 381 aaKnown RBP12.15□□□□□ -0.46
HDAC6-229ENST00000486665 KIRREL3Q8IZU9 778 aa12.15□□□□□ -0.46
HDAC6-229ENST00000486665 DTWD1Q8N5C7 304 aa12.15□□□□□ -0.46
HDAC6-229ENST00000486665 ZNF655Q8N720 491 aaPredicted RBP12.15□□□□□ -0.46
HDAC6-229ENST00000486665 GBP7Q8N8V2 638 aaPredicted RBP12.15□□□□□ -0.46
HDAC6-229ENST00000486665 AMER3Q8N944 861 aa12.15□□□□□ -0.46
HDAC6-229ENST00000486665 UTP15Q8TED0 518 aaKnown RBP12.15□□□□□ -0.46
HDAC6-229ENST00000486665 MS4A6EQ96DS6 147 aa12.15□□□□□ -0.46
HDAC6-229ENST00000486665 C19orf60Q96EN9 201 aa12.15□□□□□ -0.46
HDAC6-229ENST00000486665 APIPQ96GX9 242 aa12.15□□□□□ -0.46
HDAC6-229ENST00000486665 SMIM10Q96HG1 83 aa12.15□□□□□ -0.46
HDAC6-229ENST00000486665 SERPINI1Q99574 410 aa12.15□□□□□ -0.46
HDAC6-229ENST00000486665 SORBS1Q9BX66 1292 aaKnown RBP12.15□□□□□ -0.46
HDAC6-229ENST00000486665 WDR55Q9H6Y2 383 aaPredicted RBP12.15□□□□□ -0.46
HDAC6-229ENST00000486665 MEAF6Q9HAF1 191 aa12.15□□□□□ -0.46
HDAC6-229ENST00000486665 BRF2Q9HAW0 419 aa12.15□□□□□ -0.46
HDAC6-229ENST00000486665 KCNK13Q9HB14 408 aa12.15□□□□□ -0.46
HDAC6-229ENST00000486665 CPNE5Q9HCH3 593 aa12.15□□□□□ -0.46
HDAC6-229ENST00000486665 NPHS2Q9NP85 383 aa12.15□□□□□ -0.46
HDAC6-229ENST00000486665 FBXO8Q9NRD0 319 aa12.15□□□□□ -0.46
HDAC6-229ENST00000486665 IRAK4Q9NWZ3 460 aa12.15□□□□□ -0.46
HDAC6-229ENST00000486665 SLC39A1Q9NY26 324 aa12.15□□□□□ -0.46
HDAC6-229ENST00000486665 AKAP7Q9P0M2 348 aaPredicted RBP12.15□□□□□ -0.46
HDAC6-229ENST00000486665 VPS29Q9UBQ0 182 aa12.15□□□□□ -0.46
HDAC6-229ENST00000486665 DCTN4Q9UJW0 460 aa12.15□□□□□ -0.46
HDAC6-229ENST00000486665 RARRES3Q9UL19 164 aa12.15□□□□□ -0.46
HDAC6-229ENST00000486665 PPT2Q9UMR5 302 aa12.15□□□□□ -0.46
HDAC6-229ENST00000486665 SLC12A4Q9UP95 1085 aa12.15□□□□□ -0.46
HDAC6-229ENST00000486665 A0A0G2JN53 185 aa12.14□□□□□ -0.47
HDAC6-229ENST00000486665 GOLGA8QA0A0J9YX86 632 aa12.14□□□□□ -0.47
HDAC6-229ENST00000486665 HYKKA2RU49 373 aa12.14□□□□□ -0.47
HDAC6-229ENST00000486665 GOLGA8OA6NCC3 632 aa12.14□□□□□ -0.47
HDAC6-229ENST00000486665 GOLGA8NF8WBI6 632 aa12.14□□□□□ -0.47
HDAC6-229ENST00000486665 RTCAO00442 366 aaKnown RBP12.14□□□□□ -0.47
HDAC6-229ENST00000486665 RGS14O43566 566 aa12.14□□□□□ -0.47
HDAC6-229ENST00000486665 KLHL18O94889 574 aa12.14□□□□□ -0.47
HDAC6-229ENST00000486665 SLC35G6P0C7Q6 338 aa12.14□□□□□ -0.47
HDAC6-229ENST00000486665 ZNF888P0CJ79 500 aaPredicted RBP12.14□□□□□ -0.47
HDAC6-229ENST00000486665 HSD3B1P14060 373 aa12.14□□□□□ -0.47
HDAC6-229ENST00000486665 HSD3B2P26439 372 aa12.14□□□□□ -0.47
HDAC6-229ENST00000486665 GCGRP47871 477 aa12.14□□□□□ -0.47
HDAC6-229ENST00000486665 IDH3AP50213 366 aa12.14□□□□□ -0.47
HDAC6-229ENST00000486665 HK2P52789 917 aa12.14□□□□□ -0.47
HDAC6-229ENST00000486665 MAPK10P53779 464 aa12.14□□□□□ -0.47
HDAC6-229ENST00000486665 PLA2G16P53816 162 aa12.14□□□□□ -0.47
HDAC6-229ENST00000486665 RAB8AP61006 207 aa12.14□□□□□ -0.47
HDAC6-229ENST00000486665 PHEXP78562 749 aa12.14□□□□□ -0.47
HDAC6-229ENST00000486665 CUL3Q13618 768 aa12.14□□□□□ -0.47
HDAC6-229ENST00000486665 IMPG1Q17R60 797 aa12.14□□□□□ -0.47
HDAC6-229ENST00000486665 PWWP2BQ6NUJ5 590 aa12.14□□□□□ -0.47
HDAC6-229ENST00000486665 ABHD17CQ6PCB6 329 aa12.14□□□□□ -0.47
HDAC6-229ENST00000486665 FOXR1Q6PIV2 292 aa12.14□□□□□ -0.47
HDAC6-229ENST00000486665 CHSY3Q70JA7 882 aa12.14□□□□□ -0.47
HDAC6-229ENST00000486665 GPR155Q7Z3F1 870 aa12.14□□□□□ -0.47
HDAC6-229ENST00000486665 ZCCHC10Q8TBK6 192 aa12.14□□□□□ -0.47
HDAC6-229ENST00000486665 CHTF18Q8WVB6 975 aa12.14□□□□□ -0.47
HDAC6-229ENST00000486665 C10orf90Q96M02 699 aa12.14□□□□□ -0.47
HDAC6-229ENST00000486665 OR52B2Q96RD2 323 aa12.14□□□□□ -0.47
HDAC6-229ENST00000486665 EBF4Q9BQW3 602 aa12.14□□□□□ -0.47
HDAC6-229ENST00000486665 MRPL1Q9BYD6 325 aaKnown RBP12.14□□□□□ -0.47
HDAC6-229ENST00000486665 SEMA4CQ9C0C4 833 aa12.14□□□□□ -0.47
HDAC6-229ENST00000486665 REXO4Q9GZR2 422 aaKnown RBP12.14□□□□□ -0.47
HDAC6-229ENST00000486665 FAM107BQ9H098 131 aa12.14□□□□□ -0.47
HDAC6-229ENST00000486665 EPN3Q9H201 632 aa12.14□□□□□ -0.47
HDAC6-229ENST00000486665 AKTIPQ9H8T0 292 aa12.14□□□□□ -0.47
HDAC6-229ENST00000486665 FANCEQ9HB96 536 aa12.14□□□□□ -0.47
HDAC6-229ENST00000486665 LHX9Q9NQ69 397 aa12.14□□□□□ -0.47
HDAC6-229ENST00000486665 PRDM7Q9NQW5 492 aa12.14□□□□□ -0.47
HDAC6-229ENST00000486665 PISDQ9UG56 409 aa12.14□□□□□ -0.47
HDAC6-229ENST00000486665 PIEZO2Q9H5I5 2752 aa12.13□□□□□ -0.47
HDAC6-229ENST00000486665 TRPC5OSA6NMA1 111 aa12.13□□□□□ -0.47
HDAC6-229ENST00000486665 CYSRT1A8MQ03 144 aa12.13□□□□□ -0.47
HDAC6-229ENST00000486665 PLPP1O14494 284 aa12.13□□□□□ -0.47
HDAC6-229ENST00000486665 TXNDC9O14530 226 aa12.13□□□□□ -0.47
HDAC6-229ENST00000486665 PLD2O14939 933 aa12.13□□□□□ -0.47
HDAC6-229ENST00000486665 LSM1O15116 133 aaKnown RBP12.13□□□□□ -0.47
HDAC6-229ENST00000486665 POLR1CO15160 346 aaPredicted RBP12.13□□□□□ -0.47
HDAC6-229ENST00000486665 ZSCAN9O15535 394 aaPredicted RBP12.13□□□□□ -0.47
HDAC6-229ENST00000486665 ZNF749O43361 778 aa12.13□□□□□ -0.47
HDAC6-229ENST00000486665 ERI3O43414 337 aaKnown RBP12.13□□□□□ -0.47
HDAC6-229ENST00000486665 DIAPH2O60879 1101 aa12.13□□□□□ -0.47
HDAC6-229ENST00000486665 DNAJB6O75190 326 aa12.13□□□□□ -0.47
HDAC6-229ENST00000486665 PEX11AO75192 247 aa12.13□□□□□ -0.47
HDAC6-229ENST00000486665 PRPH2P23942 346 aa12.13□□□□□ -0.47
HDAC6-229ENST00000486665 EPHA3P29320 983 aa12.13□□□□□ -0.47
HDAC6-229ENST00000486665 STXBP1P61764 594 aaKnown RBP12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms