RNA–Protein interactions for RNA: ENST00000485943.1

USP40-216, Transcript of ubiquitin specific peptidase 40, humanhuman

TSL 4

Gene USP40, Length 568 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP40-216ENST00000485943 RDH16O75452 317 aa7.63□□□□□ -1.19
USP40-216ENST00000485943 WFS1O76024 890 aa7.63□□□□□ -1.19
USP40-216ENST00000485943 KLHL18O94889 574 aa7.63□□□□□ -1.19
USP40-216ENST00000485943 NSA2O95478 260 aaKnown RBP7.63□□□□□ -1.19
USP40-216ENST00000485943 CLDN9O95484 217 aa7.63□□□□□ -1.19
USP40-216ENST00000485943 CHEK2O96017 543 aa7.63□□□□□ -1.19
USP40-216ENST00000485943 CAPNS1P04632 268 aa7.63□□□□□ -1.19
USP40-216ENST00000485943 ZGLP1P0C6A0 271 aa7.63□□□□□ -1.19
USP40-216ENST00000485943 ZNF888P0CJ79 500 aaPredicted RBP7.63□□□□□ -1.19
USP40-216ENST00000485943 MYBL2P10244 700 aa7.63□□□□□ -1.19
USP40-216ENST00000485943 ACPPP15309 386 aa7.63□□□□□ -1.19
USP40-216ENST00000485943 ALOX12P18054 663 aa7.63□□□□□ -1.19
USP40-216ENST00000485943 TLX1P31314 330 aaPredicted RBP7.63□□□□□ -1.19
USP40-216ENST00000485943 RORAP35398 523 aa7.63□□□□□ -1.19
USP40-216ENST00000485943 SSR2P43308 183 aa7.63□□□□□ -1.19
USP40-216ENST00000485943 XCR1P46094 333 aa7.63□□□□□ -1.19
USP40-216ENST00000485943 PGDP52209 483 aa7.63□□□□□ -1.19
USP40-216ENST00000485943 PLA2G16P53816 162 aa7.63□□□□□ -1.19
USP40-216ENST00000485943 RAB8AP61006 207 aa7.63□□□□□ -1.19
USP40-216ENST00000485943 BTN3A2P78410 334 aa7.63□□□□□ -1.19
USP40-216ENST00000485943 REEP5Q00765 189 aa7.63□□□□□ -1.19
USP40-216ENST00000485943 C19orf57Q0VDD7 668 aa7.63□□□□□ -1.19
USP40-216ENST00000485943 KCNAB2Q13303 367 aa7.63□□□□□ -1.19
USP40-216ENST00000485943 SETDB1Q15047 1291 aa7.63□□□□□ -1.19
USP40-216ENST00000485943 CPSF6Q16630 551 aaKnown RBP eCLIP7.63□□□□□ -1.19
USP40-216ENST00000485943 TBR1Q16650 682 aa7.63□□□□□ -1.19
USP40-216ENST00000485943 IMPG1Q17R60 797 aa7.63□□□□□ -1.19
USP40-216ENST00000485943 C18orf21Q32NC0 220 aaPredicted RBP7.63□□□□□ -1.19
USP40-216ENST00000485943 DEFB134Q4QY38 66 aa7.63□□□□□ -1.19
USP40-216ENST00000485943 LACTB2Q53H82 288 aaPredicted RBP7.63□□□□□ -1.19
USP40-216ENST00000485943 TECRLQ5HYJ1 363 aa7.63□□□□□ -1.19
USP40-216ENST00000485943 ATP1A1-AS1Q5TC04 95 aa7.63□□□□□ -1.19
USP40-216ENST00000485943 WDR93Q6P2C0 686 aa7.63□□□□□ -1.19
USP40-216ENST00000485943 CYP20A1Q6UW02 462 aa7.63□□□□□ -1.19
USP40-216ENST00000485943 MILR1Q7Z6M3 343 aa7.63□□□□□ -1.19
USP40-216ENST00000485943 GALNT12Q8IXK2 581 aa7.63□□□□□ -1.19
USP40-216ENST00000485943 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP7.63□□□□□ -1.19
USP40-216ENST00000485943 TEX19Q8NA77 164 aa7.63□□□□□ -1.19
USP40-216ENST00000485943 ABHD11Q8NFV4 315 aa7.63□□□□□ -1.19
USP40-216ENST00000485943 OR9A4Q8NGU2 314 aa7.63□□□□□ -1.19
USP40-216ENST00000485943 STT3BQ8TCJ2 826 aa7.63□□□□□ -1.19
USP40-216ENST00000485943 ADAMTS18Q8TE60 1221 aa7.63□□□□□ -1.19
USP40-216ENST00000485943 GAL3ST3Q96A11 431 aa7.63□□□□□ -1.19
USP40-216ENST00000485943 CMTM7Q96FZ5 175 aa7.63□□□□□ -1.19
USP40-216ENST00000485943 ABHD17AQ96GS6 310 aa7.63□□□□□ -1.19
USP40-216ENST00000485943 PEX11GQ96HA9 241 aa7.63□□□□□ -1.19
USP40-216ENST00000485943 SEC16BQ96JE7 1060 aa7.63□□□□□ -1.19
USP40-216ENST00000485943 MACROD1Q9BQ69 325 aa7.63□□□□□ -1.19
USP40-216ENST00000485943 FUT8Q9BYC5 575 aa7.63□□□□□ -1.19
USP40-216ENST00000485943 PARD6BQ9BYG5 372 aa7.63□□□□□ -1.19
USP40-216ENST00000485943 ROPN1BQ9BZX4 212 aaPredicted RBP7.63□□□□□ -1.19
USP40-216ENST00000485943 ING2Q9H160 280 aa7.63□□□□□ -1.19
USP40-216ENST00000485943 ADNPQ9H2P0 1102 aa7.63□□□□□ -1.19
USP40-216ENST00000485943 EHD1Q9H4M9 534 aa7.63□□□□□ -1.19
USP40-216ENST00000485943 NOL11Q9H8H0 719 aaKnown RBP7.63□□□□□ -1.19
USP40-216ENST00000485943 WDR54Q9H977 334 aa7.63□□□□□ -1.19
USP40-216ENST00000485943 ROPN1Q9HAT0 212 aaPredicted RBP7.63□□□□□ -1.19
USP40-216ENST00000485943 SEMA4BQ9NPR2 832 aaPredicted RBP7.63□□□□□ -1.19
USP40-216ENST00000485943 ABI3Q9P2A4 366 aa7.63□□□□□ -1.19
USP40-216ENST00000485943 PTBP2Q9UKA9 531 aaKnown RBP7.63□□□□□ -1.19
USP40-216ENST00000485943 SNX6Q9UNH7 406 aa7.63□□□□□ -1.19
USP40-216ENST00000485943 PLAAQ9Y263 795 aa7.63□□□□□ -1.19
USP40-216ENST00000485943 NAALAD2Q9Y3Q0 740 aa7.63□□□□□ -1.19
USP40-216ENST00000485943 KLK4Q9Y5K2 254 aa7.63□□□□□ -1.19
USP40-216ENST00000485943 ANKRD11Q6UB99 2663 aaPredicted RBP7.63□□□□□ -1.19
USP40-216ENST00000485943 FRYQ5TBA9 3013 aa7.62□□□□□ -1.19
USP40-216ENST00000485943 NSG1A0A0A6YYJ2 146 aa7.62□□□□□ -1.19
USP40-216ENST00000485943 IGKV1-8A0A0C4DH67 115 aa7.62□□□□□ -1.19
USP40-216ENST00000485943 FITM1A5D6W6 292 aa7.62□□□□□ -1.19
USP40-216ENST00000485943 STX16-NPEPL1H3BU86 382 aa7.62□□□□□ -1.19
USP40-216ENST00000485943 STX16O14662 325 aa7.62□□□□□ -1.19
USP40-216ENST00000485943 FFAR3O14843 346 aa7.62□□□□□ -1.19
USP40-216ENST00000485943 GPR42O15529 346 aa7.62□□□□□ -1.19
USP40-216ENST00000485943 NRP2O60462 931 aa7.62□□□□□ -1.19
USP40-216ENST00000485943 SH3BGRLO75368 114 aa7.62□□□□□ -1.19
USP40-216ENST00000485943 CLEC3AO75596 197 aa7.62□□□□□ -1.19
USP40-216ENST00000485943 CDC123O75794 336 aaPredicted RBP7.62□□□□□ -1.19
USP40-216ENST00000485943 ESRRBO95718 433 aa7.62□□□□□ -1.19
USP40-216ENST00000485943 MLYCDO95822 493 aa7.62□□□□□ -1.19
USP40-216ENST00000485943 SERPINA6P08185 405 aa7.62□□□□□ -1.19
USP40-216ENST00000485943 FAM87AP0C7U9 286 aa7.62□□□□□ -1.19
USP40-216ENST00000485943 C8orf89P0DMQ9 161 aa7.62□□□□□ -1.19
USP40-216ENST00000485943 RNH1P13489 461 aaKnown RBP7.62□□□□□ -1.19
USP40-216ENST00000485943 ICAM2P13598 275 aa7.62□□□□□ -1.19
USP40-216ENST00000485943 KRT4P19013 534 aa7.62□□□□□ -1.19
USP40-216ENST00000485943 IL10P22301 178 aa7.62□□□□□ -1.19
USP40-216ENST00000485943 ATP5F1P24539 256 aaPredicted RBP7.62□□□□□ -1.19
USP40-216ENST00000485943 GABRA4P48169 554 aa7.62□□□□□ -1.19
USP40-216ENST00000485943 KCNC1P48547 511 aa7.62□□□□□ -1.19
USP40-216ENST00000485943 AGTR2P50052 363 aa7.62□□□□□ -1.19
USP40-216ENST00000485943 TAS2R50P59544 299 aa7.62□□□□□ -1.19
USP40-216ENST00000485943 NAA20P61599 178 aa7.62□□□□□ -1.19
USP40-216ENST00000485943 YBX1P67809 324 aaKnown RBP7.62□□□□□ -1.19
USP40-216ENST00000485943 MAT1AQ00266 395 aaKnown RBP7.62□□□□□ -1.19
USP40-216ENST00000485943 EEF1A2Q05639 463 aaKnown RBP7.62□□□□□ -1.19
USP40-216ENST00000485943 NFATC3Q12968 1075 aa7.62□□□□□ -1.19
USP40-216ENST00000485943 SLC13A2Q13183 592 aa7.62□□□□□ -1.19
USP40-216ENST00000485943 ATP1A4Q13733 1029 aa7.62□□□□□ -1.19
USP40-216ENST00000485943 DOC2AQ14183 400 aa7.62□□□□□ -1.19
USP40-216ENST00000485943 LY6DQ14210 128 aa7.62□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms