RNA–Protein interactions for RNA: ENST00000485871.1

SND1-212, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 3

Gene SND1, Length 597 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-212ENST00000485871 ANKDD1BA6NHY2 528 aa10.79□□□□□ -0.68
SND1-212ENST00000485871 ANKRD28O15084 1053 aa10.79□□□□□ -0.68
SND1-212ENST00000485871 UBDO15205 165 aa10.79□□□□□ -0.68
SND1-212ENST00000485871 LDOC1O95751 146 aaPredicted RBP10.79□□□□□ -0.68
SND1-212ENST00000485871 SMIM10L1P0DMW3 83 aa10.79□□□□□ -0.68
SND1-212ENST00000485871 GPX3P22352 226 aa10.79□□□□□ -0.68
SND1-212ENST00000485871 GRK3P35626 688 aa10.79□□□□□ -0.68
SND1-212ENST00000485871 ZFP36L2P47974 494 aaKnown RBP10.79□□□□□ -0.68
SND1-212ENST00000485871 CPA2P48052 419 aa10.79□□□□□ -0.68
SND1-212ENST00000485871 ACADVLP49748 655 aa10.79□□□□□ -0.68
SND1-212ENST00000485871 DUSP3P51452 185 aaPredicted RBP10.79□□□□□ -0.68
SND1-212ENST00000485871 DIO3P55073 304 aa10.79□□□□□ -0.68
SND1-212ENST00000485871 ACTR3P61158 418 aa10.79□□□□□ -0.68
SND1-212ENST00000485871 STX1BP61266 288 aa10.79□□□□□ -0.68
SND1-212ENST00000485871 AP2B1P63010 937 aa10.79□□□□□ -0.68
SND1-212ENST00000485871 RPL38P63173 70 aaKnown RBP10.79□□□□□ -0.68
SND1-212ENST00000485871 DAB2P98082 770 aa10.79□□□□□ -0.68
SND1-212ENST00000485871 CLPPQ16740 277 aaPredicted RBP10.79□□□□□ -0.68
SND1-212ENST00000485871 AMZ1Q400G9 498 aa10.79□□□□□ -0.68
SND1-212ENST00000485871 CMPK2Q5EBM0 449 aa10.79□□□□□ -0.68
SND1-212ENST00000485871 KHDRBS2Q5VWX1 349 aaKnown RBP10.79□□□□□ -0.68
SND1-212ENST00000485871 FRMPD2BQ6IN97 320 aa10.79□□□□□ -0.68
SND1-212ENST00000485871 TMEM71Q6P5X7 295 aa10.79□□□□□ -0.68
SND1-212ENST00000485871 GALNT18Q6P9A2 607 aa10.79□□□□□ -0.68
SND1-212ENST00000485871 UNQ6494/PRO21346Q6UXR6 183 aa10.79□□□□□ -0.68
SND1-212ENST00000485871 USP53Q70EK8 1073 aa10.79□□□□□ -0.68
SND1-212ENST00000485871 PLXDC1Q8IUK5 500 aa10.79□□□□□ -0.68
SND1-212ENST00000485871 NAXDQ8IW45 347 aa10.79□□□□□ -0.68
SND1-212ENST00000485871 OR4N4Q8N0Y3 316 aa10.79□□□□□ -0.68
SND1-212ENST00000485871 METTL4Q8N3J2 472 aa10.79□□□□□ -0.68
SND1-212ENST00000485871 TRPV3Q8NET8 790 aa10.79□□□□□ -0.68
SND1-212ENST00000485871 KLHL6Q8WZ60 621 aa10.79□□□□□ -0.68
SND1-212ENST00000485871 ZDHHC12Q96GR4 267 aa10.79□□□□□ -0.68
SND1-212ENST00000485871 SMIM10Q96HG1 83 aa10.79□□□□□ -0.68
SND1-212ENST00000485871 AHCYL2Q96HN2 611 aaKnown RBP10.79□□□□□ -0.68
SND1-212ENST00000485871 SLC41A2Q96JW4 573 aa10.79□□□□□ -0.68
SND1-212ENST00000485871 MRPL1Q9BYD6 325 aaKnown RBP10.79□□□□□ -0.68
SND1-212ENST00000485871 LHX9Q9NQ69 397 aa10.79□□□□□ -0.68
SND1-212ENST00000485871 SDR39U1Q9NRG7 319 aaPredicted RBP10.79□□□□□ -0.68
SND1-212ENST00000485871 STX18Q9P2W9 335 aaKnown RBP10.79□□□□□ -0.68
SND1-212ENST00000485871 DLGAP4Q9Y2H0 992 aa10.79□□□□□ -0.68
SND1-212ENST00000485871 C1QTNF9BB2RNN3 333 aa10.78□□□□□ -0.68
SND1-212ENST00000485871 H0YGG7 62 aa10.78□□□□□ -0.68
SND1-212ENST00000485871 H3BMH7 237 aa10.78□□□□□ -0.68
SND1-212ENST00000485871 PLPP1O14494 284 aa10.78□□□□□ -0.68
SND1-212ENST00000485871 TOX3O15405 576 aaPredicted RBP10.78□□□□□ -0.68
SND1-212ENST00000485871 SH3BGRLO75368 114 aa10.78□□□□□ -0.68
SND1-212ENST00000485871 SEC22BO75396 215 aa10.78□□□□□ -0.68
SND1-212ENST00000485871 PSMG1O95456 288 aa10.78□□□□□ -0.68
SND1-212ENST00000485871 CPNE6O95741 557 aa10.78□□□□□ -0.68
SND1-212ENST00000485871 RPLP0P05388 317 aaKnown RBP10.78□□□□□ -0.68
SND1-212ENST00000485871 GP1BAP07359 652 aa10.78□□□□□ -0.68
SND1-212ENST00000485871 CTSBP07858 339 aa10.78□□□□□ -0.68
SND1-212ENST00000485871 ANKRD34CP0C6C1 535 aa10.78□□□□□ -0.68
SND1-212ENST00000485871 C1QTNF9P0C862 333 aa10.78□□□□□ -0.68
SND1-212ENST00000485871 SDC1P18827 310 aa10.78□□□□□ -0.68
SND1-212ENST00000485871 PTX3P26022 381 aaPredicted RBP10.78□□□□□ -0.68
SND1-212ENST00000485871 BSGP35613 385 aa10.78□□□□□ -0.68
SND1-212ENST00000485871 ARFIP1P53367 373 aa10.78□□□□□ -0.68
SND1-212ENST00000485871 ARF3P61204 181 aaPredicted RBP10.78□□□□□ -0.68
SND1-212ENST00000485871 PHEXP78562 749 aa10.78□□□□□ -0.68
SND1-212ENST00000485871 KPNB1Q14974 876 aaKnown RBP10.78□□□□□ -0.68
SND1-212ENST00000485871 GSTA3Q16772 222 aa10.78□□□□□ -0.68
SND1-212ENST00000485871 DEFB110Q30KQ9 67 aa10.78□□□□□ -0.68
SND1-212ENST00000485871 PDCD4Q53EL6 469 aaKnown RBP10.78□□□□□ -0.68
SND1-212ENST00000485871 C1orf146Q5VVC0 180 aa10.78□□□□□ -0.68
SND1-212ENST00000485871 IL23RQ5VWK5 629 aa10.78□□□□□ -0.68
SND1-212ENST00000485871 PGM2L1Q6PCE3 622 aa10.78□□□□□ -0.68
SND1-212ENST00000485871 ASPGQ86U10 573 aa10.78□□□□□ -0.68
SND1-212ENST00000485871 KMT5CQ86Y97 462 aa10.78□□□□□ -0.68
SND1-212ENST00000485871 FUNDC1Q8IVP5 155 aa10.78□□□□□ -0.68
SND1-212ENST00000485871 PGAM4Q8N0Y7 254 aa10.78□□□□□ -0.68
SND1-212ENST00000485871 TBC1D19Q8N5T2 526 aa10.78□□□□□ -0.68
SND1-212ENST00000485871 C1orf52Q8N6N3 182 aaKnown RBP10.78□□□□□ -0.68
SND1-212ENST00000485871 FNDC5Q8NAU1 212 aa10.78□□□□□ -0.68
SND1-212ENST00000485871 OR4D9Q8NGE8 314 aa10.78□□□□□ -0.68
SND1-212ENST00000485871 PUM2Q8TB72 1066 aaKnown RBP eCLIP10.78□□□□□ -0.68
SND1-212ENST00000485871 RHBDD1Q8TEB9 315 aa10.78□□□□□ -0.68
SND1-212ENST00000485871 MS4A6EQ96DS6 147 aa10.78□□□□□ -0.68
SND1-212ENST00000485871 TCTN2Q96GX1 697 aa10.78□□□□□ -0.68
SND1-212ENST00000485871 SLC45A3Q96JT2 553 aa10.78□□□□□ -0.68
SND1-212ENST00000485871 F2RL3Q96RI0 385 aa10.78□□□□□ -0.68
SND1-212ENST00000485871 MACROD1Q9BQ69 325 aa10.78□□□□□ -0.68
SND1-212ENST00000485871 C1orf50Q9BV19 199 aa10.78□□□□□ -0.68
SND1-212ENST00000485871 KLHL31Q9H511 634 aa10.78□□□□□ -0.68
SND1-212ENST00000485871 ZNF768Q9H5H4 540 aaKnown RBP10.78□□□□□ -0.68
SND1-212ENST00000485871 ATXN7L1Q9ULK2 861 aaPredicted RBP10.78□□□□□ -0.68
SND1-212ENST00000485871 G3BP2Q9UN86 482 aaKnown RBP10.78□□□□□ -0.68
SND1-212ENST00000485871 C15orf41Q9Y2V0 281 aa10.78□□□□□ -0.68
SND1-212ENST00000485871 TMED5Q9Y3A6 229 aa10.78□□□□□ -0.68
SND1-212ENST00000485871 POLR3HQ9Y535 204 aaPredicted RBP10.78□□□□□ -0.68
SND1-212ENST00000485871 FER1L5A0AVI2 2057 aa10.78□□□□□ -0.68
SND1-212ENST00000485871 SPTBP11277 2137 aa10.78□□□□□ -0.68
SND1-212ENST00000485871 ANKRD11Q6UB99 2663 aaPredicted RBP10.77□□□□□ -0.69
SND1-212ENST00000485871 A0A088AWK7 358 aa10.77□□□□□ -0.69
SND1-212ENST00000485871 C4orf47A7E2U8 309 aa10.77□□□□□ -0.69
SND1-212ENST00000485871 BBIP1A8MTZ0 92 aa10.77□□□□□ -0.69
SND1-212ENST00000485871 SAP18O00422 153 aaKnown RBP10.77□□□□□ -0.69
SND1-212ENST00000485871 NDUFS4O43181 175 aa10.77□□□□□ -0.69
SND1-212ENST00000485871 ENTPD5O75356 428 aa10.77□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms