RNA–Protein interactions for RNA: ENST00000485842.5

HPS4-214, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 3

Gene HPS4, Length 973 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-214ENST00000485842 TRIM40Q6P9F5 258 aa11.22□□□□□ -0.61
HPS4-214ENST00000485842 EXOC3L1Q86VI1 746 aa11.22□□□□□ -0.61
HPS4-214ENST00000485842 RAB43Q86YS6 212 aa11.22□□□□□ -0.61
HPS4-214ENST00000485842 C10orf107Q8IVU9 208 aa11.22□□□□□ -0.61
HPS4-214ENST00000485842 ZC3H7AQ8IWR0 971 aaKnown RBP11.22□□□□□ -0.61
HPS4-214ENST00000485842 SHISA5Q8N114 240 aa11.22□□□□□ -0.61
HPS4-214ENST00000485842 AFAP1L2Q8N4X5 818 aa11.22□□□□□ -0.61
HPS4-214ENST00000485842 OR5T3Q8NGG3 340 aa11.22□□□□□ -0.61
HPS4-214ENST00000485842 HUS1BQ8NHY5 278 aa11.22□□□□□ -0.61
HPS4-214ENST00000485842 STT3BQ8TCJ2 826 aa11.22□□□□□ -0.61
HPS4-214ENST00000485842 SNRNP27Q8WVK2 155 aaKnown RBP11.22□□□□□ -0.61
HPS4-214ENST00000485842 MTFMTQ96DP5 389 aaKnown RBP11.22□□□□□ -0.61
HPS4-214ENST00000485842 MS4A6EQ96DS6 147 aa11.22□□□□□ -0.61
HPS4-214ENST00000485842 PGM2Q96G03 612 aa11.22□□□□□ -0.61
HPS4-214ENST00000485842 F2RL3Q96RI0 385 aa11.22□□□□□ -0.61
HPS4-214ENST00000485842 CRB3Q9BUF7 120 aa11.22□□□□□ -0.61
HPS4-214ENST00000485842 MECRQ9BV79 373 aa11.22□□□□□ -0.61
HPS4-214ENST00000485842 MS4A8Q9BY19 250 aa11.22□□□□□ -0.61
HPS4-214ENST00000485842 REXO4Q9GZR2 422 aaKnown RBP11.22□□□□□ -0.61
HPS4-214ENST00000485842 SLC26A1Q9H2B4 701 aa11.22□□□□□ -0.61
HPS4-214ENST00000485842 GSTO2Q9H4Y5 243 aa11.22□□□□□ -0.61
HPS4-214ENST00000485842 WDR54Q9H977 334 aa11.22□□□□□ -0.61
HPS4-214ENST00000485842 COPS7BQ9H9Q2 264 aaPredicted RBP11.22□□□□□ -0.61
HPS4-214ENST00000485842 MKKSQ9NPJ1 570 aaPredicted RBP11.22□□□□□ -0.61
HPS4-214ENST00000485842 DMRT3Q9NQL9 472 aa11.22□□□□□ -0.61
HPS4-214ENST00000485842 C14orf105Q9NVL8 296 aa11.22□□□□□ -0.61
HPS4-214ENST00000485842 OXSMQ9NWU1 459 aa11.22□□□□□ -0.61
HPS4-214ENST00000485842 POLHQ9Y253 713 aa11.22□□□□□ -0.61
HPS4-214ENST00000485842 PCDHGA11Q9Y5H2 935 aa11.22□□□□□ -0.61
HPS4-214ENST00000485842 CELSR3Q9NYQ7 3312 aa11.22□□□□□ -0.61
HPS4-214ENST00000485842 KMT2BQ9UMN6 2715 aaPredicted RBP11.21□□□□□ -0.61
HPS4-214ENST00000485842 LRIT2A6NDA9 550 aa11.21□□□□□ -0.61
HPS4-214ENST00000485842 H0YIV9 168 aa11.21□□□□□ -0.61
HPS4-214ENST00000485842 SAP18O00422 153 aaKnown RBP11.21□□□□□ -0.61
HPS4-214ENST00000485842 TYROBPO43914 113 aa11.21□□□□□ -0.61
HPS4-214ENST00000485842 JRKO75564 520 aa11.21□□□□□ -0.61
HPS4-214ENST00000485842 TBX6O95947 436 aaPredicted RBP11.21□□□□□ -0.61
HPS4-214ENST00000485842 UMODP07911 640 aa11.21□□□□□ -0.61
HPS4-214ENST00000485842 ZGLP1P0C6A0 271 aa11.21□□□□□ -0.61
HPS4-214ENST00000485842 H2AFXP16104 143 aaPredicted RBP11.21□□□□□ -0.61
HPS4-214ENST00000485842 HPDP32754 393 aaPredicted RBP11.21□□□□□ -0.61
HPS4-214ENST00000485842 CCR10P46092 362 aa11.21□□□□□ -0.61
HPS4-214ENST00000485842 RAP1GDS1P52306 607 aa11.21□□□□□ -0.61
HPS4-214ENST00000485842 RPS13P62277 151 aaKnown RBP11.21□□□□□ -0.61
HPS4-214ENST00000485842 KLC1Q07866 573 aa11.21□□□□□ -0.61
HPS4-214ENST00000485842 TGM3Q08188 693 aa11.21□□□□□ -0.61
HPS4-214ENST00000485842 LCP2Q13094 533 aa11.21□□□□□ -0.61
HPS4-214ENST00000485842 IFT88Q13099 833 aa11.21□□□□□ -0.61
HPS4-214ENST00000485842 ATP1A4Q13733 1029 aa11.21□□□□□ -0.61
HPS4-214ENST00000485842 ADPRMQ3LIE5 342 aa11.21□□□□□ -0.61
HPS4-214ENST00000485842 GGTA1PQ4G0N0 100 aa11.21□□□□□ -0.61
HPS4-214ENST00000485842 SGO1Q5FBB7 561 aa11.21□□□□□ -0.61
HPS4-214ENST00000485842 LIPMQ5VYY2 423 aa11.21□□□□□ -0.61
HPS4-214ENST00000485842 FRG2Q64ET8 278 aa11.21□□□□□ -0.61
HPS4-214ENST00000485842 NIPAL1Q6NVV3 410 aa11.21□□□□□ -0.61
HPS4-214ENST00000485842 GPRIN3Q6ZVF9 776 aa11.21□□□□□ -0.61
HPS4-214ENST00000485842 CDYL2Q8N8U2 506 aa11.21□□□□□ -0.61
HPS4-214ENST00000485842 OR2L5Q8NG80 312 aa11.21□□□□□ -0.61
HPS4-214ENST00000485842 OR51Q1Q8NH59 317 aa11.21□□□□□ -0.61
HPS4-214ENST00000485842 CMTM7Q96FZ5 175 aa11.21□□□□□ -0.61
HPS4-214ENST00000485842 PEX11GQ96HA9 241 aa11.21□□□□□ -0.61
HPS4-214ENST00000485842 MAGEB10Q96LZ2 347 aaPredicted RBP11.21□□□□□ -0.61
HPS4-214ENST00000485842 FRG2BQ96QU4 278 aa11.21□□□□□ -0.61
HPS4-214ENST00000485842 ZNF382Q96SR6 550 aa11.21□□□□□ -0.61
HPS4-214ENST00000485842 STMN4Q9H169 189 aaPredicted RBP11.21□□□□□ -0.61
HPS4-214ENST00000485842 OR51B5Q9H339 312 aa11.21□□□□□ -0.61
HPS4-214ENST00000485842 KCNK9Q9NPC2 374 aa11.21□□□□□ -0.61
HPS4-214ENST00000485842 TRPS1Q9UHF7 1281 aa11.21□□□□□ -0.61
HPS4-214ENST00000485842 ADGRE2Q9UHX3 823 aa11.21□□□□□ -0.61
HPS4-214ENST00000485842 C3orf18Q9UK00 162 aa11.21□□□□□ -0.61
HPS4-214ENST00000485842 MAN2B2Q9Y2E5 1009 aa11.21□□□□□ -0.61
HPS4-214ENST00000485842 STK38LQ9Y2H1 464 aa11.21□□□□□ -0.61
HPS4-214ENST00000485842 NUP210LQ5VU65 1888 aa11.21□□□□□ -0.62
HPS4-214ENST00000485842 IGLV3-12A0A075B6K2 115 aa11.2□□□□□ -0.62
HPS4-214ENST00000485842 A0A088AWK7 358 aa11.2□□□□□ -0.62
HPS4-214ENST00000485842 VSTM2BA6NLU5 285 aa11.2□□□□□ -0.62
HPS4-214ENST00000485842 MAGEB17A8MXT2 336 aa11.2□□□□□ -0.62
HPS4-214ENST00000485842 IDSB3KWA1 339 aa11.2□□□□□ -0.62
HPS4-214ENST00000485842 RTCAO00442 366 aaKnown RBP11.2□□□□□ -0.62
HPS4-214ENST00000485842 CHST10O43529 356 aa11.2□□□□□ -0.62
HPS4-214ENST00000485842 DNAJB6O75190 326 aa11.2□□□□□ -0.62
HPS4-214ENST00000485842 MLYCDO95822 493 aa11.2□□□□□ -0.62
HPS4-214ENST00000485842 SMIM10L1P0DMW3 83 aa11.2□□□□□ -0.62
HPS4-214ENST00000485842 ZNF10P21506 573 aaPredicted RBP11.2□□□□□ -0.62
HPS4-214ENST00000485842 CERS1P27544 350 aa11.2□□□□□ -0.62
HPS4-214ENST00000485842 HMOX2P30519 316 aa11.2□□□□□ -0.62
HPS4-214ENST00000485842 ALDH3A1P30838 453 aa11.2□□□□□ -0.62
HPS4-214ENST00000485842 PIK3CBP42338 1070 aa11.2□□□□□ -0.62
HPS4-214ENST00000485842 SSR2P43308 183 aa11.2□□□□□ -0.62
HPS4-214ENST00000485842 PKNOX1P55347 436 aa11.2□□□□□ -0.62
HPS4-214ENST00000485842 DNAJB13P59910 316 aa11.2□□□□□ -0.62
HPS4-214ENST00000485842 SSPNQ14714 243 aa11.2□□□□□ -0.62
HPS4-214ENST00000485842 MINDY4Q4G0A6 757 aa11.2□□□□□ -0.62
HPS4-214ENST00000485842 CRTC2Q53ET0 693 aaPredicted RBP11.2□□□□□ -0.62
HPS4-214ENST00000485842 TCHHL1Q5QJ38 904 aaPredicted RBP11.2□□□□□ -0.62
HPS4-214ENST00000485842 KHDRBS2Q5VWX1 349 aaKnown RBP11.2□□□□□ -0.62
HPS4-214ENST00000485842 FAAH2Q6GMR7 532 aa11.2□□□□□ -0.62
HPS4-214ENST00000485842 ABHD17CQ6PCB6 329 aa11.2□□□□□ -0.62
HPS4-214ENST00000485842 FRMD7Q6ZUT3 714 aa11.2□□□□□ -0.62
HPS4-214ENST00000485842 CHSY3Q70JA7 882 aa11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms