RNA–Protein interactions for RNA: ENST00000485746.1

PTCD1-205, Transcript of pentatricopeptide repeat domain 1, humanhuman

TSL 3

Gene PTCD1, Length 721 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD1-205ENST00000485746 TBCCQ15814 346 aa11.81□□□□□ -0.52
PTCD1-205ENST00000485746 NADK2Q4G0N4 442 aa11.81□□□□□ -0.52
PTCD1-205ENST00000485746 TECRLQ5HYJ1 363 aa11.81□□□□□ -0.52
PTCD1-205ENST00000485746 GTF2H2CQ6P1K8 395 aa11.81□□□□□ -0.52
PTCD1-205ENST00000485746 ADGRD1Q6QNK2 874 aa11.81□□□□□ -0.52
PTCD1-205ENST00000485746 TMEM205Q6UW68 189 aa11.81□□□□□ -0.52
PTCD1-205ENST00000485746 CPEB2Q7Z5Q1 589 aaKnown RBP11.81□□□□□ -0.52
PTCD1-205ENST00000485746 CYP4X1Q8N118 509 aa11.81□□□□□ -0.52
PTCD1-205ENST00000485746 EFCAB3Q8N7B9 438 aa11.81□□□□□ -0.52
PTCD1-205ENST00000485746 EIF1ADQ8N9N8 165 aaKnown RBP11.81□□□□□ -0.52
PTCD1-205ENST00000485746 ARMC2Q8NEN0 867 aa11.81□□□□□ -0.52
PTCD1-205ENST00000485746 ISL2Q96A47 359 aa11.81□□□□□ -0.52
PTCD1-205ENST00000485746 GPR78Q96P69 363 aa11.81□□□□□ -0.52
PTCD1-205ENST00000485746 MRPL57Q9BQC6 102 aaKnown RBP11.81□□□□□ -0.52
PTCD1-205ENST00000485746 MESP1Q9BRJ9 268 aa11.81□□□□□ -0.52
PTCD1-205ENST00000485746 ZNF700Q9H0M5 742 aa11.81□□□□□ -0.52
PTCD1-205ENST00000485746 EPN3Q9H201 632 aa11.81□□□□□ -0.52
PTCD1-205ENST00000485746 EPS8L2Q9H6S3 715 aa11.81□□□□□ -0.52
PTCD1-205ENST00000485746 ZNF552Q9H707 407 aaPredicted RBP11.81□□□□□ -0.52
PTCD1-205ENST00000485746 CLK4Q9HAZ1 481 aaKnown RBP11.81□□□□□ -0.52
PTCD1-205ENST00000485746 MLXIPLQ9NP71 852 aa11.81□□□□□ -0.52
PTCD1-205ENST00000485746 PSMC3IPQ9P2W1 217 aaPredicted RBP11.81□□□□□ -0.52
PTCD1-205ENST00000485746 XPR1Q9UBH6 696 aa11.81□□□□□ -0.52
PTCD1-205ENST00000485746 TBK1Q9UHD2 729 aa11.81□□□□□ -0.52
PTCD1-205ENST00000485746 ZNF490Q9ULM2 529 aaPredicted RBP11.81□□□□□ -0.52
PTCD1-205ENST00000485746 ASB1Q9Y576 335 aa11.81□□□□□ -0.52
PTCD1-205ENST00000485746 LOC400499M0QZD8 3231 aa11.81□□□□□ -0.52
PTCD1-205ENST00000485746 IGHV3-20A0A0C4DH32 117 aa11.8□□□□□ -0.52
PTCD1-205ENST00000485746 OR2W5A6NFC9 320 aa11.8□□□□□ -0.52
PTCD1-205ENST00000485746 LRRC14BA6NHZ5 514 aa11.8□□□□□ -0.52
PTCD1-205ENST00000485746 PRMT3O60678 531 aa11.8□□□□□ -0.52
PTCD1-205ENST00000485746 PRAMEF4O60810 478 aa11.8□□□□□ -0.52
PTCD1-205ENST00000485746 DNAJB6O75190 326 aa11.8□□□□□ -0.52
PTCD1-205ENST00000485746 SH3BGRLO75368 114 aa11.8□□□□□ -0.52
PTCD1-205ENST00000485746 SEC24DO94855 1032 aaPredicted RBP11.8□□□□□ -0.52
PTCD1-205ENST00000485746 TGFB1P01137 390 aa11.8□□□□□ -0.52
PTCD1-205ENST00000485746 HNRNPH1P31943 449 aaKnown RBP11.8□□□□□ -0.52
PTCD1-205ENST00000485746 CASP2P42575 452 aa11.8□□□□□ -0.52
PTCD1-205ENST00000485746 MAGEA12P43365 314 aa11.8□□□□□ -0.52
PTCD1-205ENST00000485746 CSRP3P50461 194 aa11.8□□□□□ -0.52
PTCD1-205ENST00000485746 CCNG1P51959 295 aa11.8□□□□□ -0.52
PTCD1-205ENST00000485746 OR4D2P58180 307 aa11.8□□□□□ -0.52
PTCD1-205ENST00000485746 HYAL2Q12891 473 aa11.8□□□□□ -0.52
PTCD1-205ENST00000485746 DDX39BQ13838 428 aaKnown RBP11.8□□□□□ -0.52
PTCD1-205ENST00000485746 RCN2Q14257 317 aa11.8□□□□□ -0.52
PTCD1-205ENST00000485746 NAA30Q147X3 362 aaPredicted RBP11.8□□□□□ -0.52
PTCD1-205ENST00000485746 ABRAXAS2Q15018 415 aa11.8□□□□□ -0.52
PTCD1-205ENST00000485746 PCBP2Q15366 365 aaKnown RBP eCLIP11.8□□□□□ -0.52
PTCD1-205ENST00000485746 BTBD16Q32M84 506 aa11.8□□□□□ -0.52
PTCD1-205ENST00000485746 PRAMEF9Q5VWM5 478 aa11.8□□□□□ -0.52
PTCD1-205ENST00000485746 TIFABQ6ZNK6 161 aa11.8□□□□□ -0.52
PTCD1-205ENST00000485746 LINC00696Q6ZRV3 163 aa11.8□□□□□ -0.52
PTCD1-205ENST00000485746 LANCL3Q6ZV70 420 aa11.8□□□□□ -0.52
PTCD1-205ENST00000485746 CHSY3Q70JA7 882 aa11.8□□□□□ -0.52
PTCD1-205ENST00000485746 GOLGA7Q7Z5G4 137 aa11.8□□□□□ -0.52
PTCD1-205ENST00000485746 ANKRD37Q7Z713 158 aa11.8□□□□□ -0.52
PTCD1-205ENST00000485746 CNPY4Q8N129 248 aa11.8□□□□□ -0.52
PTCD1-205ENST00000485746 PLPP5Q8NEB5 264 aa11.8□□□□□ -0.52
PTCD1-205ENST00000485746 SRFBP1Q8NEF9 429 aaKnown RBP11.8□□□□□ -0.52
PTCD1-205ENST00000485746 OR2L5Q8NG80 312 aa11.8□□□□□ -0.52
PTCD1-205ENST00000485746 REPS1Q96D71 796 aa11.8□□□□□ -0.52
PTCD1-205ENST00000485746 MS4A6EQ96DS6 147 aa11.8□□□□□ -0.52
PTCD1-205ENST00000485746 WDR34Q96EX3 536 aa11.8□□□□□ -0.52
PTCD1-205ENST00000485746 CNDP1Q96KN2 507 aa11.8□□□□□ -0.52
PTCD1-205ENST00000485746 PTCHD1Q96NR3 888 aa11.8□□□□□ -0.52
PTCD1-205ENST00000485746 F2RL3Q96RI0 385 aa11.8□□□□□ -0.52
PTCD1-205ENST00000485746 CENPKQ9BS16 269 aa11.8□□□□□ -0.52
PTCD1-205ENST00000485746 TUBB6Q9BUF5 446 aa11.8□□□□□ -0.52
PTCD1-205ENST00000485746 ILKAPQ9H0C8 392 aaPredicted RBP11.8□□□□□ -0.52
PTCD1-205ENST00000485746 MRPL46Q9H2W6 279 aaKnown RBP11.8□□□□□ -0.52
PTCD1-205ENST00000485746 IPPKQ9H8X2 491 aa11.8□□□□□ -0.52
PTCD1-205ENST00000485746 LUZP4Q9P127 313 aa11.8□□□□□ -0.52
PTCD1-205ENST00000485746 PTGFRNQ9P2B2 879 aa11.8□□□□□ -0.52
PTCD1-205ENST00000485746 ADGRE2Q9UHX3 823 aa11.8□□□□□ -0.52
PTCD1-205ENST00000485746 LOC102723996A0A087X1L8 192 aa11.79□□□□□ -0.52
PTCD1-205ENST00000485746 SMIM23A6NLE4 172 aa11.79□□□□□ -0.52
PTCD1-205ENST00000485746 FAM227AF5H4B4 570 aa11.79□□□□□ -0.52
PTCD1-205ENST00000485746 ZNF500O60304 480 aaPredicted RBP11.79□□□□□ -0.52
PTCD1-205ENST00000485746 SIX3O95343 332 aaPredicted RBP11.79□□□□□ -0.52
PTCD1-205ENST00000485746 SLU7O95391 586 aaKnown RBP11.79□□□□□ -0.52
PTCD1-205ENST00000485746 SERPINA7P05543 415 aa11.79□□□□□ -0.52
PTCD1-205ENST00000485746 PRR35P0CG20 571 aa11.79□□□□□ -0.52
PTCD1-205ENST00000485746 SMIM10L1P0DMW3 83 aa11.79□□□□□ -0.52
PTCD1-205ENST00000485746 MYBL2P10244 700 aa11.79□□□□□ -0.52
PTCD1-205ENST00000485746 EPORP19235 508 aa11.79□□□□□ -0.52
PTCD1-205ENST00000485746 CD22P20273 847 aa11.79□□□□□ -0.52
PTCD1-205ENST00000485746 SERPINB1P30740 379 aa11.79□□□□□ -0.52
PTCD1-205ENST00000485746 RAP1GDS1P52306 607 aa11.79□□□□□ -0.52
PTCD1-205ENST00000485746 MTTPP55157 894 aa11.79□□□□□ -0.52
PTCD1-205ENST00000485746 MLLT10P55197 1068 aa11.79□□□□□ -0.52
PTCD1-205ENST00000485746 KCNC4Q03721 635 aa11.79□□□□□ -0.52
PTCD1-205ENST00000485746 Q0VFX4 171 aa11.79□□□□□ -0.52
PTCD1-205ENST00000485746 PCOLCEQ15113 449 aa11.79□□□□□ -0.52
PTCD1-205ENST00000485746 AP5B1Q2VPB7 878 aa11.79□□□□□ -0.52
PTCD1-205ENST00000485746 SFT2D3Q587I9 215 aa11.79□□□□□ -0.52
PTCD1-205ENST00000485746 LIPJQ5W064 366 aa11.79□□□□□ -0.52
PTCD1-205ENST00000485746 TTC19Q6DKK2 380 aaPredicted RBP11.79□□□□□ -0.52
PTCD1-205ENST00000485746 GRHL2Q6ISB3 625 aa11.79□□□□□ -0.52
PTCD1-205ENST00000485746 JMJD6Q6NYC1 403 aaPredicted RBP11.79□□□□□ -0.52
PTCD1-205ENST00000485746 ISLR2Q6UXK2 745 aa11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms