RNA–Protein interactions for RNA: ENST00000484048.1

UBE2E1-209, Transcript of ubiquitin conjugating enzyme E2 E1, humanhuman

TSL 3

Gene UBE2E1, Length 786 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2E1-209ENST00000484048 MAP3K7O43318 606 aa15.37■□□□□ 0.05
UBE2E1-209ENST00000484048 TLX3O43711 291 aaPredicted RBP15.37■□□□□ 0.05
UBE2E1-209ENST00000484048 KLHL41O60662 606 aa15.37■□□□□ 0.05
UBE2E1-209ENST00000484048 SH3BGRLO75368 114 aa15.37■□□□□ 0.05
UBE2E1-209ENST00000484048 RFPL3O75679 317 aa15.37■□□□□ 0.05
UBE2E1-209ENST00000484048 SEMA3DO95025 777 aa15.37■□□□□ 0.05
UBE2E1-209ENST00000484048 WISP1O95388 367 aa15.37■□□□□ 0.05
UBE2E1-209ENST00000484048 MSL3P1P0C860 447 aa15.37■□□□□ 0.05
UBE2E1-209ENST00000484048 HNRNPH1P31943 449 aaKnown RBP15.37■□□□□ 0.05
UBE2E1-209ENST00000484048 ERVK-8P63133 956 aa15.37■□□□□ 0.05
UBE2E1-209ENST00000484048 E2F1Q01094 437 aa15.37■□□□□ 0.05
UBE2E1-209ENST00000484048 TBL3Q12788 808 aaKnown RBP15.37■□□□□ 0.05
UBE2E1-209ENST00000484048 AP5B1Q2VPB7 878 aa15.37■□□□□ 0.05
UBE2E1-209ENST00000484048 DEFB110Q30KQ9 67 aa15.37■□□□□ 0.05
UBE2E1-209ENST00000484048 RFTN2Q52LD8 501 aaPredicted RBP15.37■□□□□ 0.05
UBE2E1-209ENST00000484048 SPDYAQ5MJ70 313 aa15.37■□□□□ 0.05
UBE2E1-209ENST00000484048 DEPDC1Q5TB30 811 aa15.37■□□□□ 0.05
UBE2E1-209ENST00000484048 KHDRBS2Q5VWX1 349 aaKnown RBP15.37■□□□□ 0.05
UBE2E1-209ENST00000484048 METTL21CQ5VZV1 264 aa15.37■□□□□ 0.05
UBE2E1-209ENST00000484048 CHSY3Q70JA7 882 aa15.37■□□□□ 0.05
UBE2E1-209ENST00000484048 MCATQ8IVS2 390 aaKnown RBP15.37■□□□□ 0.05
UBE2E1-209ENST00000484048 CHTF18Q8WVB6 975 aa15.37■□□□□ 0.05
UBE2E1-209ENST00000484048 RERGQ96A58 199 aaPredicted RBP15.37■□□□□ 0.05
UBE2E1-209ENST00000484048 C11orf24Q96F05 449 aaPredicted RBP15.37■□□□□ 0.05
UBE2E1-209ENST00000484048 FCRL1Q96LA6 429 aa15.37■□□□□ 0.05
UBE2E1-209ENST00000484048 CCDC74BQ96LY2 380 aa15.37■□□□□ 0.05
UBE2E1-209ENST00000484048 ZNF285Q96NJ3 590 aa15.37■□□□□ 0.05
UBE2E1-209ENST00000484048 SLC6A16Q9GZN6 736 aa15.37■□□□□ 0.05
UBE2E1-209ENST00000484048 AICDAQ9GZX7 198 aa15.37■□□□□ 0.05
UBE2E1-209ENST00000484048 PRM3Q9NNZ6 103 aa15.37■□□□□ 0.05
UBE2E1-209ENST00000484048 PCDHGA1Q9Y5H4 931 aa15.37■□□□□ 0.05
UBE2E1-209ENST00000484048 SPTA1P02549 2419 aa15.37■□□□□ 0.05
UBE2E1-209ENST00000484048 SRPX2O60687 465 aaPredicted RBP15.36■□□□□ 0.05
UBE2E1-209ENST00000484048 SEC22BO75396 215 aa15.36■□□□□ 0.05
UBE2E1-209ENST00000484048 STATHP02808 62 aa15.36■□□□□ 0.05
UBE2E1-209ENST00000484048 SERPIND1P05546 499 aa15.36■□□□□ 0.05
UBE2E1-209ENST00000484048 ALDOCP09972 364 aaKnown RBP15.36■□□□□ 0.05
UBE2E1-209ENST00000484048 SLC35G6P0C7Q6 338 aa15.36■□□□□ 0.05
UBE2E1-209ENST00000484048 ARL4DP49703 201 aa15.36■□□□□ 0.05
UBE2E1-209ENST00000484048 RPL38P63173 70 aaKnown RBP15.36■□□□□ 0.05
UBE2E1-209ENST00000484048 EMX2Q04743 252 aa15.36■□□□□ 0.05
UBE2E1-209ENST00000484048 ZFP36L1Q07352 338 aaKnown RBP15.36■□□□□ 0.05
UBE2E1-209ENST00000484048 RGS1Q08116 209 aa15.36■□□□□ 0.05
UBE2E1-209ENST00000484048 TRA2AQ13595 282 aaKnown RBP eCLIP15.36■□□□□ 0.05
UBE2E1-209ENST00000484048 TMEM35AQ53FP2 167 aa15.36■□□□□ 0.05
UBE2E1-209ENST00000484048 SPIN4Q56A73 249 aa15.36■□□□□ 0.05
UBE2E1-209ENST00000484048 TOR1AIP1Q5JTV8 583 aa15.36■□□□□ 0.05
UBE2E1-209ENST00000484048 MANEAQ5SRI9 462 aa15.36■□□□□ 0.05
UBE2E1-209ENST00000484048 TMEM198Q66K66 360 aa15.36■□□□□ 0.05
UBE2E1-209ENST00000484048 SPATA19Q7Z5L4 167 aa15.36■□□□□ 0.05
UBE2E1-209ENST00000484048 METTL4Q8N3J2 472 aa15.36■□□□□ 0.05
UBE2E1-209ENST00000484048 FNDC5Q8NAU1 212 aa15.36■□□□□ 0.05
UBE2E1-209ENST00000484048 CAMKVQ8NCB2 501 aa15.36■□□□□ 0.05
UBE2E1-209ENST00000484048 F2RL3Q96RI0 385 aa15.36■□□□□ 0.05
UBE2E1-209ENST00000484048 MACROD1Q9BQ69 325 aa15.36■□□□□ 0.05
UBE2E1-209ENST00000484048 MRPL1Q9BYD6 325 aaKnown RBP15.36■□□□□ 0.05
UBE2E1-209ENST00000484048 SIRT5Q9NXA8 310 aa15.36■□□□□ 0.05
UBE2E1-209ENST00000484048 TRIM33Q9UPN9 1127 aa15.36■□□□□ 0.05
UBE2E1-209ENST00000484048 PLCL2Q9UPR0 1127 aa15.36■□□□□ 0.05
UBE2E1-209ENST00000484048 TMED5Q9Y3A6 229 aa15.36■□□□□ 0.05
UBE2E1-209ENST00000484048 SEC16AO15027 2179 aa15.36■□□□□ 0.05
UBE2E1-209ENST00000484048 B8ZZF3 427 aa15.35■□□□□ 0.05
UBE2E1-209ENST00000484048 PLPP1O14494 284 aa15.35■□□□□ 0.05
UBE2E1-209ENST00000484048 ACPPP15309 386 aa15.35■□□□□ 0.05
UBE2E1-209ENST00000484048 PDX1P52945 283 aa15.35■□□□□ 0.05
UBE2E1-209ENST00000484048 ARFIP1P53367 373 aa15.35■□□□□ 0.05
UBE2E1-209ENST00000484048 VSX2P58304 361 aaPredicted RBP15.35■□□□□ 0.05
UBE2E1-209ENST00000484048 STXBP1P61764 594 aaKnown RBP15.35■□□□□ 0.05
UBE2E1-209ENST00000484048 ACSM2AQ08AH3 577 aa15.35■□□□□ 0.05
UBE2E1-209ENST00000484048 MAD2L1Q13257 205 aaPredicted RBP15.35■□□□□ 0.05
UBE2E1-209ENST00000484048 KCNAB1Q14722 419 aa15.35■□□□□ 0.05
UBE2E1-209ENST00000484048 TMTC4Q5T4D3 741 aa15.35■□□□□ 0.05
UBE2E1-209ENST00000484048 ACSM2BQ68CK6 577 aa15.35■□□□□ 0.05
UBE2E1-209ENST00000484048 UBE3DQ7Z6J8 389 aa15.35■□□□□ 0.05
UBE2E1-209ENST00000484048 C1orf52Q8N6N3 182 aaKnown RBP15.35■□□□□ 0.05
UBE2E1-209ENST00000484048 ZNF655Q8N720 491 aaPredicted RBP15.35■□□□□ 0.05
UBE2E1-209ENST00000484048 CSNK1A1LQ8N752 337 aa15.35■□□□□ 0.05
UBE2E1-209ENST00000484048 MS4A6EQ96DS6 147 aa15.35■□□□□ 0.05
UBE2E1-209ENST00000484048 CATSPER2Q96P56 530 aa15.35■□□□□ 0.05
UBE2E1-209ENST00000484048 ZNF717Q9BY31 904 aaPredicted RBP15.35■□□□□ 0.05
UBE2E1-209ENST00000484048 REXO4Q9GZR2 422 aaKnown RBP15.35■□□□□ 0.05
UBE2E1-209ENST00000484048 KLHL31Q9H511 634 aa15.35■□□□□ 0.05
UBE2E1-209ENST00000484048 ZNF385DQ9H6B1 395 aa15.35■□□□□ 0.05
UBE2E1-209ENST00000484048 ENAMQ9NRM1 1142 aa15.35■□□□□ 0.05
UBE2E1-209ENST00000484048 ASIC5Q9NY37 505 aa15.35■□□□□ 0.05
UBE2E1-209ENST00000484048 C4orf51C9J302 202 aa15.34■□□□□ 0.05
UBE2E1-209ENST00000484048 H3BMH7 237 aa15.34■□□□□ 0.05
UBE2E1-209ENST00000484048 SAP18O00422 153 aaKnown RBP15.34■□□□□ 0.05
UBE2E1-209ENST00000484048 TXNDC9O14530 226 aa15.34■□□□□ 0.05
UBE2E1-209ENST00000484048 UBDO15205 165 aa15.34■□□□□ 0.05
UBE2E1-209ENST00000484048 ZSCAN9O15535 394 aaPredicted RBP15.34■□□□□ 0.05
UBE2E1-209ENST00000484048 DCTN3O75935 186 aa15.34■□□□□ 0.05
UBE2E1-209ENST00000484048 NTRK1P04629 796 aa15.34■□□□□ 0.05
UBE2E1-209ENST00000484048 EIF2S1P05198 315 aaKnown RBP15.34■□□□□ 0.05
UBE2E1-209ENST00000484048 CTSBP07858 339 aa15.34■□□□□ 0.05
UBE2E1-209ENST00000484048 SMIM10L1P0DMW3 83 aa15.34■□□□□ 0.05
UBE2E1-209ENST00000484048 FOLR1P15328 257 aa15.34■□□□□ 0.05
UBE2E1-209ENST00000484048 RAP1GDS1P52306 607 aa15.34■□□□□ 0.05
UBE2E1-209ENST00000484048 RAE1P78406 368 aaKnown RBP15.34■□□□□ 0.05
UBE2E1-209ENST00000484048 INSM1Q01101 510 aaPredicted RBP15.34■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms