RNA–Protein interactions for RNA: ENST00000483851.6

SHOX2-204, Transcript of short stature homeobox 2, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SHOX2, Length 1,866 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2-204ENST00000483851 PAQR7Q86WK9 346 aa25.06■■□□□ 1.6
SHOX2-204ENST00000483851 MARVELD2Q8N4S9 558 aa25.06■■□□□ 1.6
SHOX2-204ENST00000483851 HSPA12BQ96MM6 686 aa25.06■■□□□ 1.6
SHOX2-204ENST00000483851 PANX1Q96RD7 426 aa25.06■■□□□ 1.6
SHOX2-204ENST00000483851 EFHD1Q9BUP0 239 aa25.06■■□□□ 1.6
SHOX2-204ENST00000483851 DUSP15Q9H1R2 295 aaPredicted RBP25.06■■□□□ 1.6
SHOX2-204ENST00000483851 DDX31Q9H8H2 851 aaKnown RBP25.06■■□□□ 1.6
SHOX2-204ENST00000483851 RAB26Q9ULW5 256 aa25.06■■□□□ 1.6
SHOX2-204ENST00000483851 EXO1Q9UQ84 846 aaKnown RBP25.06■■□□□ 1.6
SHOX2-204ENST00000483851 INVSQ9Y283 1065 aa25.06■■□□□ 1.6
SHOX2-204ENST00000483851 PCDHGA4Q9Y5G9 962 aa25.06■■□□□ 1.6
SHOX2-204ENST00000483851 ARHGAP10A1A4S6 786 aa25.05■■□□□ 1.6
SHOX2-204ENST00000483851 LRIT2A6NDA9 550 aa25.05■■□□□ 1.6
SHOX2-204ENST00000483851 HAT1O14929 419 aa25.05■■□□□ 1.6
SHOX2-204ENST00000483851 ARPC2O15144 300 aa25.05■■□□□ 1.6
SHOX2-204ENST00000483851 GRIA3P42263 894 aa25.05■■□□□ 1.6
SHOX2-204ENST00000483851 TAS2R50P59544 299 aa25.05■■□□□ 1.6
SHOX2-204ENST00000483851 RPS15AP62244 130 aaKnown RBP25.05■■□□□ 1.6
SHOX2-204ENST00000483851 C2orf80Q0P641 193 aa25.05■■□□□ 1.6
SHOX2-204ENST00000483851 MAP7Q14244 749 aa25.05■■□□□ 1.6
SHOX2-204ENST00000483851 IFNEQ86WN2 208 aa25.05■■□□□ 1.6
SHOX2-204ENST00000483851 DEFB119Q8N690 84 aa25.05■■□□□ 1.6
SHOX2-204ENST00000483851 SRFBP1Q8NEF9 429 aaKnown RBP25.05■■□□□ 1.6
SHOX2-204ENST00000483851 ZDHHC1Q8WTX9 485 aa25.05■■□□□ 1.6
SHOX2-204ENST00000483851 ZNF764Q96H86 408 aaPredicted RBP25.05■■□□□ 1.6
SHOX2-204ENST00000483851 ZNF583Q96ND8 569 aa25.05■■□□□ 1.6
SHOX2-204ENST00000483851 OR2A14Q96R47 310 aa25.05■■□□□ 1.6
SHOX2-204ENST00000483851 CPPED1Q9BRF8 314 aaPredicted RBP25.05■■□□□ 1.6
SHOX2-204ENST00000483851 INPP5KQ9BT40 448 aa25.05■■□□□ 1.6
SHOX2-204ENST00000483851 TRIM8Q9BZR9 551 aa25.05■■□□□ 1.6
SHOX2-204ENST00000483851 MUTYHQ9UIF7 546 aa25.05■■□□□ 1.6
SHOX2-204ENST00000483851 CEP192Q8TEP8 1941 aa25.05■■□□□ 1.6
SHOX2-204ENST00000483851 TSFMP43897 325 aaKnown RBP25.04■■□□□ 1.6
SHOX2-204ENST00000483851 SELPLGQ14242 412 aa25.04■■□□□ 1.6
SHOX2-204ENST00000483851 UGT2A3Q6UWM9 527 aa25.04■■□□□ 1.6
SHOX2-204ENST00000483851 ANKRD46Q86W74 232 aa25.04■■□□□ 1.6
SHOX2-204ENST00000483851 GKN2Q86XP6 184 aa25.04■■□□□ 1.6
SHOX2-204ENST00000483851 JPH3Q8WXH2 748 aaPredicted RBP25.04■■□□□ 1.6
SHOX2-204ENST00000483851 KAT8Q9H7Z6 458 aaKnown RBP25.04■■□□□ 1.6
SHOX2-204ENST00000483851 ACTR10Q9NZ32 417 aa25.04■■□□□ 1.6
SHOX2-204ENST00000483851 BTBD3Q9Y2F9 522 aa25.04■■□□□ 1.6
SHOX2-204ENST00000483851 OR2A25A4D2G3 310 aa25.04■■□□□ 1.6
SHOX2-204ENST00000483851 C2orf74A8MZ97 194 aa25.04■■□□□ 1.6
SHOX2-204ENST00000483851 CELA2BP08218 269 aaPredicted RBP25.04■■□□□ 1.6
SHOX2-204ENST00000483851 ATP6V1B2P21281 511 aa25.04■■□□□ 1.6
SHOX2-204ENST00000483851 MAPK12P53778 367 aa25.04■■□□□ 1.6
SHOX2-204ENST00000483851 SLC5A12Q1EHB4 618 aa25.04■■□□□ 1.6
SHOX2-204ENST00000483851 CYP2R1Q6VVX0 501 aa25.04■■□□□ 1.6
SHOX2-204ENST00000483851 TMEM26Q6ZUK4 368 aa25.04■■□□□ 1.6
SHOX2-204ENST00000483851 FAM46DQ8NEK8 389 aa25.04■■□□□ 1.6
SHOX2-204ENST00000483851 PPCDCQ96CD2 204 aa25.04■■□□□ 1.6
SHOX2-204ENST00000483851 THAP11Q96EK4 314 aa25.04■■□□□ 1.6
SHOX2-204ENST00000483851 SH3BP4Q9P0V3 963 aa25.04■■□□□ 1.6
SHOX2-204ENST00000483851 SPASTQ9UBP0 616 aa25.04■■□□□ 1.6
SHOX2-204ENST00000483851 EGFL7Q9UHF1 273 aa25.04■■□□□ 1.6
SHOX2-204ENST00000483851 H0YJX3 145 aa25.03■■□□□ 1.6
SHOX2-204ENST00000483851 ZW10O43264 779 aa25.03■■□□□ 1.6
SHOX2-204ENST00000483851 UMPSP11172 480 aa25.03■■□□□ 1.6
SHOX2-204ENST00000483851 UGT2B7P16662 529 aa25.03■■□□□ 1.6
SHOX2-204ENST00000483851 ZNF26P17031 533 aaPredicted RBP25.03■■□□□ 1.6
SHOX2-204ENST00000483851 NXPH1P58417 271 aa25.03■■□□□ 1.6
SHOX2-204ENST00000483851 PDK3Q15120 406 aa25.03■■□□□ 1.6
SHOX2-204ENST00000483851 MTX3Q5HYI7 312 aa25.03■■□□□ 1.6
SHOX2-204ENST00000483851 WDR45BQ5MNZ6 344 aa25.03■■□□□ 1.6
SHOX2-204ENST00000483851 OR4C11Q6IEV9 310 aa25.03■■□□□ 1.6
SHOX2-204ENST00000483851 DNAJC14Q6Y2X3 702 aaPredicted RBP25.03■■□□□ 1.6
SHOX2-204ENST00000483851 PLD3Q8IV08 490 aa25.03■■□□□ 1.6
SHOX2-204ENST00000483851 OR2T12Q8NG77 320 aa25.03■■□□□ 1.6
SHOX2-204ENST00000483851 POP5Q969H6 163 aaKnown RBP25.03■■□□□ 1.6
SHOX2-204ENST00000483851 ARMC1Q9NVT9 282 aa25.03■■□□□ 1.6
SHOX2-204ENST00000483851 OR6C74A6NCV1 312 aa25.02■■□□□ 1.6
SHOX2-204ENST00000483851 EVPLLA8MZ36 301 aa25.02■■□□□ 1.6
SHOX2-204ENST00000483851 VILLO15195 856 aa25.02■■□□□ 1.6
SHOX2-204ENST00000483851 GPIP06744 558 aa25.02■■□□□ 1.6
SHOX2-204ENST00000483851 PPIBP23284 216 aaKnown RBP25.02■■□□□ 1.6
SHOX2-204ENST00000483851 ZXDAP98168 799 aa25.02■■□□□ 1.6
SHOX2-204ENST00000483851 C1orf61Q13536 156 aa25.02■■□□□ 1.6
SHOX2-204ENST00000483851 SIM2Q14190 667 aaPredicted RBP25.02■■□□□ 1.6
SHOX2-204ENST00000483851 HEPACAMQ14CZ8 416 aa25.02■■□□□ 1.6
SHOX2-204ENST00000483851 FAM20CQ8IXL6 584 aa25.02■■□□□ 1.6
SHOX2-204ENST00000483851 GOT1L1Q8NHS2 421 aaPredicted RBP25.02■■□□□ 1.6
SHOX2-204ENST00000483851 PATE1Q8WXA2 126 aa25.02■■□□□ 1.6
SHOX2-204ENST00000483851 UCK1Q9HA47 277 aa25.02■■□□□ 1.6
SHOX2-204ENST00000483851 SLC6A13Q9NSD5 602 aa25.02■■□□□ 1.6
SHOX2-204ENST00000483851 EML5Q05BV3 1969 aa25.02■■□□□ 1.6
SHOX2-204ENST00000483851 GMNNO75496 209 aa25.02■■□□□ 1.6
SHOX2-204ENST00000483851 GBAP04062 536 aa25.02■■□□□ 1.6
SHOX2-204ENST00000483851 MAOBP27338 520 aa25.02■■□□□ 1.6
SHOX2-204ENST00000483851 CDKN2CP42773 168 aa25.02■■□□□ 1.6
SHOX2-204ENST00000483851 HNRNPKP61978 463 aaKnown RBP eCLIP25.02■■□□□ 1.6
SHOX2-204ENST00000483851 HHEXQ03014 270 aa25.02■■□□□ 1.6
SHOX2-204ENST00000483851 ABHD18Q0P651 414 aa25.02■■□□□ 1.6
SHOX2-204ENST00000483851 UBE3DQ7Z6J8 389 aa25.02■■□□□ 1.6
SHOX2-204ENST00000483851 CALHM3Q86XJ0 350 aa25.02■■□□□ 1.6
SHOX2-204ENST00000483851 OR52E4Q8NGH9 312 aa25.02■■□□□ 1.6
SHOX2-204ENST00000483851 LRTOMTQ8WZ04 291 aa25.02■■□□□ 1.6
SHOX2-204ENST00000483851 MIR1-1HGQ9H1L0 117 aa25.02■■□□□ 1.6
SHOX2-204ENST00000483851 LHX9Q9NQ69 397 aa25.02■■□□□ 1.6
SHOX2-204ENST00000483851 CCM2LQ9NUG4 571 aaPredicted RBP25.02■■□□□ 1.6
SHOX2-204ENST00000483851 SNRNP200O75643 2136 aaKnown RBP25.01■■□□□ 1.59
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms