RNA–Protein interactions for RNA: ENST00000482590.1

CLK1-212, Transcript of CDC like kinase 1, humanhuman

TSL 2

Gene CLK1, Length 626 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-212ENST00000482590 DIRAS3O95661 229 aa6.32□□□□□ -1.4
CLK1-212ENST00000482590 FGFR1OPO95684 399 aaKnown RBP6.32□□□□□ -1.4
CLK1-212ENST00000482590 MMP2P08253 660 aa6.32□□□□□ -1.4
CLK1-212ENST00000482590 MAT2AP31153 395 aaKnown RBP6.32□□□□□ -1.4
CLK1-212ENST00000482590 CCR1P32246 355 aa6.32□□□□□ -1.4
CLK1-212ENST00000482590 DRD3P35462 400 aa6.32□□□□□ -1.4
CLK1-212ENST00000482590 USP8P40818 1118 aa6.32□□□□□ -1.4
CLK1-212ENST00000482590 RPL34P49207 117 aaKnown RBP6.32□□□□□ -1.4
CLK1-212ENST00000482590 ACADVLP49748 655 aa6.32□□□□□ -1.4
CLK1-212ENST00000482590 CHN2P52757 468 aa6.32□□□□□ -1.4
CLK1-212ENST00000482590 PNLIPRP2P54317 469 aa6.32□□□□□ -1.4
CLK1-212ENST00000482590 STX17P56962 302 aa6.32□□□□□ -1.4
CLK1-212ENST00000482590 NXPH1P58417 271 aa6.32□□□□□ -1.4
CLK1-212ENST00000482590 TIRAPP58753 221 aa6.32□□□□□ -1.4
CLK1-212ENST00000482590 YWHAZP63104 245 aaKnown RBP6.32□□□□□ -1.4
CLK1-212ENST00000482590 CCDC15Q0P6D6 951 aa6.32□□□□□ -1.4
CLK1-212ENST00000482590 CSTF3Q12996 717 aaKnown RBP6.32□□□□□ -1.4
CLK1-212ENST00000482590 FHL3Q13643 280 aa6.32□□□□□ -1.4
CLK1-212ENST00000482590 DPYSQ14117 519 aa6.32□□□□□ -1.4
CLK1-212ENST00000482590 ASTE1Q2TB18 679 aaPredicted RBP6.32□□□□□ -1.4
CLK1-212ENST00000482590 ACCSLQ4AC99 568 aa6.32□□□□□ -1.4
CLK1-212ENST00000482590 SOWAHCQ53LP3 525 aaPredicted RBP6.32□□□□□ -1.4
CLK1-212ENST00000482590 CACHD1Q5VU97 1274 aa6.32□□□□□ -1.4
CLK1-212ENST00000482590 SYPL2Q5VXT5 272 aa6.32□□□□□ -1.4
CLK1-212ENST00000482590 NEK5Q6P3R8 708 aa6.32□□□□□ -1.4
CLK1-212ENST00000482590 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP6.32□□□□□ -1.4
CLK1-212ENST00000482590 KCTD9Q7L273 389 aa6.32□□□□□ -1.4
CLK1-212ENST00000482590 DEFB106AQ8N104 65 aa6.32□□□□□ -1.4
CLK1-212ENST00000482590 NHLRC2Q8NBF2 726 aa6.32□□□□□ -1.4
CLK1-212ENST00000482590 LPCAT1Q8NF37 534 aa6.32□□□□□ -1.4
CLK1-212ENST00000482590 MBD3L2Q8NHZ7 208 aaPredicted RBP6.32□□□□□ -1.4
CLK1-212ENST00000482590 LMO3Q8TAP4 145 aa6.32□□□□□ -1.4
CLK1-212ENST00000482590 AGR3Q8TD06 166 aa6.32□□□□□ -1.4
CLK1-212ENST00000482590 ST7LQ8TDW4 575 aa6.32□□□□□ -1.4
CLK1-212ENST00000482590 SAP25Q8TEE9 199 aa6.32□□□□□ -1.4
CLK1-212ENST00000482590 LINC00615Q96LM1 132 aaPredicted RBP6.32□□□□□ -1.4
CLK1-212ENST00000482590 PAFAH2Q99487 392 aa6.32□□□□□ -1.4
CLK1-212ENST00000482590 MYOCQ99972 504 aa6.32□□□□□ -1.4
CLK1-212ENST00000482590 ZNF350Q9GZX5 532 aa6.32□□□□□ -1.4
CLK1-212ENST00000482590 EBF2Q9HAK2 575 aa6.32□□□□□ -1.4
CLK1-212ENST00000482590 UBE2TQ9NPD8 197 aaPredicted RBP6.32□□□□□ -1.4
CLK1-212ENST00000482590 DYRK4Q9NR20 520 aa6.32□□□□□ -1.4
CLK1-212ENST00000482590 HOMER3Q9NSC5 361 aa6.32□□□□□ -1.4
CLK1-212ENST00000482590 DDIT4Q9NX09 232 aa6.32□□□□□ -1.4
CLK1-212ENST00000482590 SPASTQ9UBP0 616 aa6.32□□□□□ -1.4
CLK1-212ENST00000482590 DNAJB11Q9UBS4 358 aa6.32□□□□□ -1.4
CLK1-212ENST00000482590 MAN1B1Q9UKM7 699 aa6.32□□□□□ -1.4
CLK1-212ENST00000482590 VANGL2Q9ULK5 521 aa6.32□□□□□ -1.4
CLK1-212ENST00000482590 TEX264Q9Y6I9 313 aa6.32□□□□□ -1.4
CLK1-212ENST00000482590 HELZ2Q9BYK8 2649 aaKnown RBP6.32□□□□□ -1.4
CLK1-212ENST00000482590 A0A087WV48 116 aa6.31□□□□□ -1.4
CLK1-212ENST00000482590 LOC102723996A0A087X1L8 192 aa6.31□□□□□ -1.4
CLK1-212ENST00000482590 LOC105369274A0A096LPK9 316 aa6.31□□□□□ -1.4
CLK1-212ENST00000482590 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP6.31□□□□□ -1.4
CLK1-212ENST00000482590 LOC102723532A0A0G2JNH3 316 aa6.31□□□□□ -1.4
CLK1-212ENST00000482590 DRGXA6NNA5 263 aa6.31□□□□□ -1.4
CLK1-212ENST00000482590 KDM4EB2RXH2 506 aaPredicted RBP6.31□□□□□ -1.4
CLK1-212ENST00000482590 HNRNPCL2B2RXH8 293 aa6.31□□□□□ -1.4
CLK1-212ENST00000482590 H0YIV9 168 aa6.31□□□□□ -1.4
CLK1-212ENST00000482590 TO15178 435 aa6.31□□□□□ -1.4
CLK1-212ENST00000482590 LATO43561 262 aa6.31□□□□□ -1.4
CLK1-212ENST00000482590 SDC3O75056 442 aa6.31□□□□□ -1.4
CLK1-212ENST00000482590 CLDN11O75508 207 aa6.31□□□□□ -1.4
CLK1-212ENST00000482590 DAB1O75553 588 aa6.31□□□□□ -1.4
CLK1-212ENST00000482590 GRAP2O75791 330 aa6.31□□□□□ -1.4
CLK1-212ENST00000482590 IGLV3-25P01717 112 aa6.31□□□□□ -1.4
CLK1-212ENST00000482590 RHOCP08134 193 aa6.31□□□□□ -1.4
CLK1-212ENST00000482590 NCF1P14598 390 aaPredicted RBP6.31□□□□□ -1.4
CLK1-212ENST00000482590 PRLRP16471 622 aa6.31□□□□□ -1.4
CLK1-212ENST00000482590 FDXRP22570 491 aa6.31□□□□□ -1.4
CLK1-212ENST00000482590 AHCYP23526 432 aa6.31□□□□□ -1.4
CLK1-212ENST00000482590 ZNF135P52742 658 aaPredicted RBP6.31□□□□□ -1.4
CLK1-212ENST00000482590 PLK1P53350 603 aa6.31□□□□□ -1.4
CLK1-212ENST00000482590 CLDN6P56747 220 aa6.31□□□□□ -1.4
CLK1-212ENST00000482590 PITX1P78337 314 aaPredicted RBP6.31□□□□□ -1.4
CLK1-212ENST00000482590 EFNB1P98172 346 aa6.31□□□□□ -1.4
CLK1-212ENST00000482590 PMP22Q01453 160 aa6.31□□□□□ -1.4
CLK1-212ENST00000482590 SEMG2Q02383 582 aa6.31□□□□□ -1.4
CLK1-212ENST00000482590 CNTN1Q12860 1018 aa6.31□□□□□ -1.4
CLK1-212ENST00000482590 OVGP1Q12889 678 aa6.31□□□□□ -1.4
CLK1-212ENST00000482590 NME3Q13232 169 aa6.31□□□□□ -1.4
CLK1-212ENST00000482590 ZNF177Q13360 481 aaPredicted RBP6.31□□□□□ -1.4
CLK1-212ENST00000482590 ILKQ13418 452 aa6.31□□□□□ -1.4
CLK1-212ENST00000482590 DLG2Q15700 870 aa6.31□□□□□ -1.4
CLK1-212ENST00000482590 GSTA3Q16772 222 aa6.31□□□□□ -1.4
CLK1-212ENST00000482590 POM121L1PQ3SYA9 428 aa6.31□□□□□ -1.4
CLK1-212ENST00000482590 EFHC1Q5JVL4 640 aa6.31□□□□□ -1.4
CLK1-212ENST00000482590 RIPPLY2Q5TAB7 128 aa6.31□□□□□ -1.4
CLK1-212ENST00000482590 OR6B2Q6IFH4 312 aa6.31□□□□□ -1.4
CLK1-212ENST00000482590 ARMC6Q6NXE6 501 aa6.31□□□□□ -1.4
CLK1-212ENST00000482590 FBXL22Q6P050 247 aa6.31□□□□□ -1.4
CLK1-212ENST00000482590 TRIM65Q6PJ69 517 aa6.31□□□□□ -1.4
CLK1-212ENST00000482590 FOXR2Q6PJQ5 311 aa6.31□□□□□ -1.4
CLK1-212ENST00000482590 PPP1R21Q6ZMI0 780 aa6.31□□□□□ -1.4
CLK1-212ENST00000482590 ZNF572Q7Z3I7 529 aaPredicted RBP6.31□□□□□ -1.4
CLK1-212ENST00000482590 IQCHQ86VS3 1027 aa6.31□□□□□ -1.4
CLK1-212ENST00000482590 TRIM69Q86WT6 500 aa6.31□□□□□ -1.4
CLK1-212ENST00000482590 OR4N4Q8N0Y3 316 aa6.31□□□□□ -1.4
CLK1-212ENST00000482590 MMP21Q8N119 569 aa6.31□□□□□ -1.4
CLK1-212ENST00000482590 KDM8Q8N371 416 aa6.31□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms