RNA–Protein interactions for RNA: ENST00000481999.1

CHD3-211, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 2

Gene CHD3, Length 2,515 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-211ENST00000481999 POLR2IP36954 125 aaKnown RBP13.85□□□□□ -0.19
CHD3-211ENST00000481999 TPD52P55327 224 aaPredicted RBP13.85□□□□□ -0.19
CHD3-211ENST00000481999 PRSS53Q2L4Q9 553 aa13.85□□□□□ -0.19
CHD3-211ENST00000481999 NXPE4Q6UWF7 544 aa13.85□□□□□ -0.19
CHD3-211ENST00000481999 MTSS1LQ765P7 747 aa13.85□□□□□ -0.19
CHD3-211ENST00000481999 DCUN1D3Q8IWE4 304 aa13.85□□□□□ -0.19
CHD3-211ENST00000481999 ANKRD53Q8N9V6 530 aa13.85□□□□□ -0.19
CHD3-211ENST00000481999 FBXO15Q8NCQ5 510 aaPredicted RBP13.85□□□□□ -0.19
CHD3-211ENST00000481999 FNDC8Q8TC99 324 aa13.85□□□□□ -0.19
CHD3-211ENST00000481999 RAD51AP1Q96B01 352 aa13.85□□□□□ -0.19
CHD3-211ENST00000481999 MAGED4Q96JG8 741 aa13.85□□□□□ -0.19
CHD3-211ENST00000481999 FERD3LQ96RJ6 166 aa13.85□□□□□ -0.19
CHD3-211ENST00000481999 RMND5AQ9H871 391 aa13.85□□□□□ -0.19
CHD3-211ENST00000481999 SMURF2Q9HAU4 748 aa13.85□□□□□ -0.19
CHD3-211ENST00000481999 FANCEQ9HB96 536 aa13.85□□□□□ -0.19
CHD3-211ENST00000481999 BLOC1S6Q9UL45 172 aa13.85□□□□□ -0.19
CHD3-211ENST00000481999 VPS4AQ9UN37 437 aa13.85□□□□□ -0.19
CHD3-211ENST00000481999 MAN2B2Q9Y2E5 1009 aa13.85□□□□□ -0.19
CHD3-211ENST00000481999 KLHL20Q9Y2M5 609 aa13.85□□□□□ -0.19
CHD3-211ENST00000481999 A0A0G2JN53 185 aa13.85□□□□□ -0.19
CHD3-211ENST00000481999 SH3PXD2BA1X283 911 aa13.85□□□□□ -0.19
CHD3-211ENST00000481999 CREG1O75629 220 aa13.85□□□□□ -0.19
CHD3-211ENST00000481999 SEC14L2O76054 403 aa13.85□□□□□ -0.19
CHD3-211ENST00000481999 HOXB9P17482 250 aaPredicted RBP13.85□□□□□ -0.19
CHD3-211ENST00000481999 IL1RNP18510 177 aa13.85□□□□□ -0.19
CHD3-211ENST00000481999 SKIV2LQ15477 1246 aaKnown RBP13.85□□□□□ -0.19
CHD3-211ENST00000481999 LRIF1Q5T3J3 769 aa13.85□□□□□ -0.19
CHD3-211ENST00000481999 ZNF621Q6ZSS3 439 aa13.85□□□□□ -0.19
CHD3-211ENST00000481999 CALHM3Q86XJ0 350 aa13.85□□□□□ -0.19
CHD3-211ENST00000481999 EID3Q8N140 333 aa13.85□□□□□ -0.19
CHD3-211ENST00000481999 SLC44A3Q8N4M1 653 aa13.85□□□□□ -0.19
CHD3-211ENST00000481999 TESCQ96BS2 214 aa13.85□□□□□ -0.19
CHD3-211ENST00000481999 FAM120BQ96EK7 910 aaKnown RBP13.85□□□□□ -0.19
CHD3-211ENST00000481999 GUCD1Q96NT3 240 aa13.85□□□□□ -0.19
CHD3-211ENST00000481999 DMRT3Q9NQL9 472 aa13.85□□□□□ -0.19
CHD3-211ENST00000481999 ITM2CQ9NQX7 267 aa13.85□□□□□ -0.19
CHD3-211ENST00000481999 SH3BP4Q9P0V3 963 aa13.85□□□□□ -0.19
CHD3-211ENST00000481999 TMED5Q9Y3A6 229 aa13.85□□□□□ -0.19
CHD3-211ENST00000481999 DGKBQ9Y6T7 804 aa13.85□□□□□ -0.19
CHD3-211ENST00000481999 A0A1W2PPV9 198 aa13.84□□□□□ -0.19
CHD3-211ENST00000481999 PDZK1P1A8MUH7 402 aa13.84□□□□□ -0.19
CHD3-211ENST00000481999 KMOO15229 486 aa13.84□□□□□ -0.19
CHD3-211ENST00000481999 PCDH7O60245 1069 aa13.84□□□□□ -0.19
CHD3-211ENST00000481999 TMED1Q13445 227 aa13.84□□□□□ -0.19
CHD3-211ENST00000481999 FGD3Q5JSP0 725 aa13.84□□□□□ -0.19
CHD3-211ENST00000481999 SDE2Q6IQ49 451 aa13.84□□□□□ -0.19
CHD3-211ENST00000481999 SPESP1Q6UW49 350 aa13.84□□□□□ -0.19
CHD3-211ENST00000481999 R3HCC1LQ7Z5L2 792 aaKnown RBP13.84□□□□□ -0.19
CHD3-211ENST00000481999 TMEM132CQ8N3T6 1108 aa13.84□□□□□ -0.19
CHD3-211ENST00000481999 ZCCHC7Q8N3Z6 543 aaKnown RBP13.84□□□□□ -0.19
CHD3-211ENST00000481999 OXR1Q8N573 874 aa13.84□□□□□ -0.19
CHD3-211ENST00000481999 MIPOL1Q8TD10 442 aa13.84□□□□□ -0.19
CHD3-211ENST00000481999 NETO1Q8TDF5 533 aa13.84□□□□□ -0.19
CHD3-211ENST00000481999 CHTF18Q8WVB6 975 aa13.84□□□□□ -0.19
CHD3-211ENST00000481999 CIDECQ96AQ7 238 aaPredicted RBP13.84□□□□□ -0.19
CHD3-211ENST00000481999 ITCHQ96J02 903 aa13.84□□□□□ -0.19
CHD3-211ENST00000481999 FCRL1Q96LA6 429 aa13.84□□□□□ -0.19
CHD3-211ENST00000481999 HHIPQ96QV1 700 aa13.84□□□□□ -0.19
CHD3-211ENST00000481999 MBOAT4Q96T53 435 aa13.84□□□□□ -0.19
CHD3-211ENST00000481999 CDX2Q99626 313 aaPredicted RBP13.84□□□□□ -0.19
CHD3-211ENST00000481999 CPPED1Q9BRF8 314 aaPredicted RBP13.84□□□□□ -0.19
CHD3-211ENST00000481999 NAA50Q9GZZ1 169 aaKnown RBP13.84□□□□□ -0.19
CHD3-211ENST00000481999 ABCG4Q9H172 646 aa13.84□□□□□ -0.19
CHD3-211ENST00000481999 LMCD1Q9NZU5 365 aa13.84□□□□□ -0.19
CHD3-211ENST00000481999 C3orf18Q9UK00 162 aa13.84□□□□□ -0.19
CHD3-211ENST00000481999 NDRG2Q9UN36 371 aaKnown RBP13.84□□□□□ -0.19
CHD3-211ENST00000481999 FPGTO14772 594 aa13.84□□□□□ -0.19
CHD3-211ENST00000481999 NTRK1P04629 796 aa13.84□□□□□ -0.19
CHD3-211ENST00000481999 KLK1P06870 262 aa13.84□□□□□ -0.19
CHD3-211ENST00000481999 NUDT7P0C024 238 aa13.84□□□□□ -0.19
CHD3-211ENST00000481999 CCNA2P20248 432 aa13.84□□□□□ -0.19
CHD3-211ENST00000481999 GSTM2P28161 218 aa13.84□□□□□ -0.19
CHD3-211ENST00000481999 MAPK1P28482 360 aa13.84□□□□□ -0.19
CHD3-211ENST00000481999 GABARAPL2P60520 117 aa13.84□□□□□ -0.19
CHD3-211ENST00000481999 HORMAD1Q86X24 394 aa13.84□□□□□ -0.19
CHD3-211ENST00000481999 SFTPA2Q8IWL1 248 aa13.84□□□□□ -0.19
CHD3-211ENST00000481999 KLHDC8AQ8IYD2 350 aa13.84□□□□□ -0.19
CHD3-211ENST00000481999 OR5K1Q8NHB7 308 aa13.84□□□□□ -0.19
CHD3-211ENST00000481999 TSACCQ96A04 125 aaPredicted RBP13.84□□□□□ -0.19
CHD3-211ENST00000481999 AMBRA1Q9C0C7 1298 aa13.84□□□□□ -0.19
CHD3-211ENST00000481999 PHPT1Q9NRX4 125 aaPredicted RBP13.84□□□□□ -0.19
CHD3-211ENST00000481999 C5AR2Q9P296 337 aa13.84□□□□□ -0.19
CHD3-211ENST00000481999 RUVBL1Q9Y265 456 aaKnown RBP13.84□□□□□ -0.19
CHD3-211ENST00000481999 PCDHGA8Q9Y5G5 932 aa13.84□□□□□ -0.19
CHD3-211ENST00000481999 TMX2-CTNND1H3BSU7 103 aa13.83□□□□□ -0.2
CHD3-211ENST00000481999 NOBOXO60393 691 aa13.83□□□□□ -0.2
CHD3-211ENST00000481999 E2F6O75461 281 aa13.83□□□□□ -0.2
CHD3-211ENST00000481999 PRPS1L1P21108 318 aa13.83□□□□□ -0.2
CHD3-211ENST00000481999 MATN1P21941 496 aa13.83□□□□□ -0.2
CHD3-211ENST00000481999 KCNAB2Q13303 367 aa13.83□□□□□ -0.2
CHD3-211ENST00000481999 TOP3AQ13472 1001 aaPredicted RBP13.83□□□□□ -0.2
CHD3-211ENST00000481999 GAB1Q13480 694 aa13.83□□□□□ -0.2
CHD3-211ENST00000481999 E2F2Q14209 437 aa13.83□□□□□ -0.2
CHD3-211ENST00000481999 C6orf141Q5SZD1 244 aa13.83□□□□□ -0.2
CHD3-211ENST00000481999 ANKRD34AQ69YU3 496 aa13.83□□□□□ -0.2
CHD3-211ENST00000481999 XAF1Q6GPH4 301 aa13.83□□□□□ -0.2
CHD3-211ENST00000481999 TMIGD1Q6UXZ0 262 aa13.83□□□□□ -0.2
CHD3-211ENST00000481999 UNC5DQ6UXZ4 953 aa13.83□□□□□ -0.2
CHD3-211ENST00000481999 ZNF852Q6ZMS4 543 aa13.83□□□□□ -0.2
CHD3-211ENST00000481999 HS3ST5Q8IZT8 346 aa13.83□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms