RNA–Protein interactions for RNA: ENST00000480836.5

PTPN7-212, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

TSL 2

Gene PTPN7, Length 1,189 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-212ENST00000480836 MYOCOSA0A1B0GUC4 107 aa12.43□□□□□ -0.42
PTPN7-212ENST00000480836 TCRBV16S1A1N1A0A5B0 115 aa12.43□□□□□ -0.42
PTPN7-212ENST00000480836 PINLYPA6NC86 204 aa12.43□□□□□ -0.42
PTPN7-212ENST00000480836 DNALI1O14645 258 aaPredicted RBP12.43□□□□□ -0.42
PTPN7-212ENST00000480836 NME2P1O60361 137 aa12.43□□□□□ -0.42
PTPN7-212ENST00000480836 SLC25A12O75746 678 aa12.43□□□□□ -0.42
PTPN7-212ENST00000480836 SLC35G6P0C7Q6 338 aa12.43□□□□□ -0.42
PTPN7-212ENST00000480836 ESRRAP11474 423 aaPredicted RBP12.43□□□□□ -0.42
PTPN7-212ENST00000480836 COX6B1P14854 86 aa12.43□□□□□ -0.42
PTPN7-212ENST00000480836 NME2P22392 152 aa12.43□□□□□ -0.42
PTPN7-212ENST00000480836 ELK3P41970 407 aa12.43□□□□□ -0.42
PTPN7-212ENST00000480836 RGS4P49798 205 aa12.43□□□□□ -0.42
PTPN7-212ENST00000480836 IL2P60568 153 aa12.43□□□□□ -0.42
PTPN7-212ENST00000480836 AP2B1P63010 937 aa12.43□□□□□ -0.42
PTPN7-212ENST00000480836 RBPJQ06330 500 aa12.43□□□□□ -0.42
PTPN7-212ENST00000480836 HERC3Q15034 1050 aa12.43□□□□□ -0.42
PTPN7-212ENST00000480836 ZNF800Q2TB10 664 aaPredicted RBP eCLIP12.43□□□□□ -0.42
PTPN7-212ENST00000480836 BBS9Q3SYG4 887 aa12.43□□□□□ -0.42
PTPN7-212ENST00000480836 RPTNQ6XPR3 784 aa12.43□□□□□ -0.42
PTPN7-212ENST00000480836 THOC6Q86W42 341 aaKnown RBP12.43□□□□□ -0.42
PTPN7-212ENST00000480836 SULF2Q8IWU5 870 aa12.43□□□□□ -0.42
PTPN7-212ENST00000480836 ARMC10Q8N2F6 343 aa12.43□□□□□ -0.42
PTPN7-212ENST00000480836 GPATCH11Q8N954 259 aa12.43□□□□□ -0.42
PTPN7-212ENST00000480836 ACTRT1Q8TDG2 376 aa12.43□□□□□ -0.42
PTPN7-212ENST00000480836 SLC5A11Q8WWX8 675 aa12.43□□□□□ -0.42
PTPN7-212ENST00000480836 MTFMTQ96DP5 389 aaKnown RBP12.43□□□□□ -0.42
PTPN7-212ENST00000480836 CERS2Q96G23 380 aa12.43□□□□□ -0.42
PTPN7-212ENST00000480836 CHST11Q9NPF2 352 aa12.43□□□□□ -0.42
PTPN7-212ENST00000480836 DEPPQ9NTK1 212 aa12.43□□□□□ -0.42
PTPN7-212ENST00000480836 ITGB1BP2Q9UKP3 347 aa12.43□□□□□ -0.42
PTPN7-212ENST00000480836 JRKLQ9Y4A0 524 aa12.43□□□□□ -0.42
PTPN7-212ENST00000480836 POLQO75417 2590 aa12.43□□□□□ -0.42
PTPN7-212ENST00000480836 A0A1B0GTH9 108 aa12.42□□□□□ -0.42
PTPN7-212ENST00000480836 PRMT3O60678 531 aa12.42□□□□□ -0.42
PTPN7-212ENST00000480836 ZNF354AO60765 605 aaPredicted RBP12.42□□□□□ -0.42
PTPN7-212ENST00000480836 CLDN14O95500 239 aa12.42□□□□□ -0.42
PTPN7-212ENST00000480836 HIST1H2AGP0C0S8 130 aaPredicted RBP12.42□□□□□ -0.42
PTPN7-212ENST00000480836 HIST1H2ADP20671 130 aa12.42□□□□□ -0.42
PTPN7-212ENST00000480836 IL10P22301 178 aa12.42□□□□□ -0.42
PTPN7-212ENST00000480836 TRHRP34981 398 aaPredicted RBP12.42□□□□□ -0.42
PTPN7-212ENST00000480836 PTGER4P35408 488 aa12.42□□□□□ -0.42
PTPN7-212ENST00000480836 GMPRP36959 345 aa12.42□□□□□ -0.42
PTPN7-212ENST00000480836 REEP5Q00765 189 aa12.42□□□□□ -0.42
PTPN7-212ENST00000480836 CSHL1Q14406 222 aa12.42□□□□□ -0.42
PTPN7-212ENST00000480836 NAA30Q147X3 362 aaPredicted RBP12.42□□□□□ -0.42
PTPN7-212ENST00000480836 TESK1Q15569 626 aa12.42□□□□□ -0.42
PTPN7-212ENST00000480836 XKR6Q5GH73 641 aa12.42□□□□□ -0.42
PTPN7-212ENST00000480836 EMC4Q5J8M3 183 aa12.42□□□□□ -0.42
PTPN7-212ENST00000480836 SPANXN3Q5MJ09 141 aa12.42□□□□□ -0.42
PTPN7-212ENST00000480836 NXPE4Q6UWF7 544 aa12.42□□□□□ -0.42
PTPN7-212ENST00000480836 QSOX2Q6ZRP7 698 aa12.42□□□□□ -0.42
PTPN7-212ENST00000480836 GDF7Q7Z4P5 450 aa12.42□□□□□ -0.42
PTPN7-212ENST00000480836 VN1R5Q7Z5H4 357 aa12.42□□□□□ -0.42
PTPN7-212ENST00000480836 STRA8Q7Z7C7 330 aa12.42□□□□□ -0.42
PTPN7-212ENST00000480836 CEP97Q8IW35 865 aa12.42□□□□□ -0.42
PTPN7-212ENST00000480836 SLC5A8Q8N695 610 aa12.42□□□□□ -0.42
PTPN7-212ENST00000480836 HIST1H2AHQ96KK5 128 aa12.42□□□□□ -0.42
PTPN7-212ENST00000480836 HIST1H2AJQ99878 128 aa12.42□□□□□ -0.42
PTPN7-212ENST00000480836 HAUS8Q9BT25 410 aa12.42□□□□□ -0.42
PTPN7-212ENST00000480836 H2AFJQ9BTM1 129 aa12.42□□□□□ -0.42
PTPN7-212ENST00000480836 ENKD1Q9H0I2 346 aa12.42□□□□□ -0.42
PTPN7-212ENST00000480836 CHMP2BQ9UQN3 213 aa12.42□□□□□ -0.42
PTPN7-212ENST00000480836 TEX264Q9Y6I9 313 aa12.42□□□□□ -0.42
PTPN7-212ENST00000480836 CACNA1CQ13936 2221 aa12.42□□□□□ -0.42
PTPN7-212ENST00000480836 NPEPPSL1A6NEC2 478 aa12.41□□□□□ -0.42
PTPN7-212ENST00000480836 SAGE2PA6NJ88 616 aa12.41□□□□□ -0.42
PTPN7-212ENST00000480836 PGRMC1O00264 195 aaKnown RBP12.41□□□□□ -0.42
PTPN7-212ENST00000480836 HS6ST1O60243 411 aa12.41□□□□□ -0.42
PTPN7-212ENST00000480836 MYBL2P10244 700 aa12.41□□□□□ -0.42
PTPN7-212ENST00000480836 AGAP20933 346 aa12.41□□□□□ -0.42
PTPN7-212ENST00000480836 CCND1P24385 295 aa12.41□□□□□ -0.42
PTPN7-212ENST00000480836 HNRNPH1P31943 449 aaKnown RBP12.41□□□□□ -0.42
PTPN7-212ENST00000480836 GRK3P35626 688 aa12.41□□□□□ -0.42
PTPN7-212ENST00000480836 AHRP35869 848 aa12.41□□□□□ -0.42
PTPN7-212ENST00000480836 CYB561P49447 251 aa12.41□□□□□ -0.42
PTPN7-212ENST00000480836 MEOX1P50221 254 aa12.41□□□□□ -0.42
PTPN7-212ENST00000480836 HLCSP50747 726 aa12.41□□□□□ -0.42
PTPN7-212ENST00000480836 GPR85P60893 370 aa12.41□□□□□ -0.42
PTPN7-212ENST00000480836 PDAP1Q13442 181 aaKnown RBP12.41□□□□□ -0.42
PTPN7-212ENST00000480836 FASTKD3Q14CZ7 662 aaKnown RBP12.41□□□□□ -0.42
PTPN7-212ENST00000480836 RBBP5Q15291 538 aaKnown RBP12.41□□□□□ -0.42
PTPN7-212ENST00000480836 CMPK2Q5EBM0 449 aa12.41□□□□□ -0.42
PTPN7-212ENST00000480836 FBXO48Q5FWF7 155 aa12.41□□□□□ -0.42
PTPN7-212ENST00000480836 TOR1AIP1Q5JTV8 583 aa12.41□□□□□ -0.42
PTPN7-212ENST00000480836 LRRC8EQ6NSJ5 796 aa12.41□□□□□ -0.42
PTPN7-212ENST00000480836 MTFR2Q6P444 385 aa12.41□□□□□ -0.42
PTPN7-212ENST00000480836 PALM2Q8IXS6 379 aa12.41□□□□□ -0.42
PTPN7-212ENST00000480836 LGI4Q8N135 537 aa12.41□□□□□ -0.42
PTPN7-212ENST00000480836 TMEM178AQ8NBL3 297 aa12.41□□□□□ -0.42
PTPN7-212ENST00000480836 OR52N2Q8NGI0 321 aa12.41□□□□□ -0.42
PTPN7-212ENST00000480836 ESAMQ96AP7 390 aa12.41□□□□□ -0.42
PTPN7-212ENST00000480836 CFAP36Q96G28 342 aa12.41□□□□□ -0.42
PTPN7-212ENST00000480836 PDLIM5Q96HC4 596 aaKnown RBP12.41□□□□□ -0.42
PTPN7-212ENST00000480836 MAGED4Q96JG8 741 aa12.41□□□□□ -0.42
PTPN7-212ENST00000480836 MCMBPQ9BTE3 642 aa12.41□□□□□ -0.42
PTPN7-212ENST00000480836 FAM129AQ9BZQ8 928 aa12.41□□□□□ -0.42
PTPN7-212ENST00000480836 SMYD2Q9NRG4 433 aa12.41□□□□□ -0.42
PTPN7-212ENST00000480836 F8P00451 2351 aa12.41□□□□□ -0.42
PTPN7-212ENST00000480836 A0A0G2JMM0 328 aa12.4□□□□□ -0.42
PTPN7-212ENST00000480836 A0A1W2PPB8 328 aa12.4□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms