RNA–Protein interactions for RNA: ENST00000480744.2

LIMS3-203, Transcript of LIM zinc finger domain containing 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene LIMS3, Length 1,197 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS3-203ENST00000480744 MLYCDO95822 493 aa14.3□□□□□ -0.12
LIMS3-203ENST00000480744 RNH1P13489 461 aaKnown RBP14.3□□□□□ -0.12
LIMS3-203ENST00000480744 MAOAP21397 527 aa14.3□□□□□ -0.12
LIMS3-203ENST00000480744 TAS2R39P59534 338 aa14.3□□□□□ -0.12
LIMS3-203ENST00000480744 ZNF800Q2TB10 664 aaPredicted RBP eCLIP14.3□□□□□ -0.12
LIMS3-203ENST00000480744 GALNTL5Q7Z4T8 443 aa14.3□□□□□ -0.12
LIMS3-203ENST00000480744 MRGPRGQ86SM5 289 aa14.3□□□□□ -0.12
LIMS3-203ENST00000480744 RPS19BP1Q86WX3 136 aaKnown RBP14.3□□□□□ -0.12
LIMS3-203ENST00000480744 TICAM1Q8IUC6 712 aa14.3□□□□□ -0.12
LIMS3-203ENST00000480744 CREG2Q8IUH2 290 aa14.3□□□□□ -0.12
LIMS3-203ENST00000480744 HORMAD2Q8N7B1 307 aa14.3□□□□□ -0.12
LIMS3-203ENST00000480744 FAM98AQ8NCA5 519 aaKnown RBP14.3□□□□□ -0.12
LIMS3-203ENST00000480744 CCT6BQ92526 530 aa14.3□□□□□ -0.12
LIMS3-203ENST00000480744 SCMH1Q96GD3 660 aa14.3□□□□□ -0.12
LIMS3-203ENST00000480744 NAPGQ99747 312 aaPredicted RBP14.3□□□□□ -0.12
LIMS3-203ENST00000480744 UNKQ9C0B0 810 aaKnown RBP14.3□□□□□ -0.12
LIMS3-203ENST00000480744 SLC6A16Q9GZN6 736 aa14.3□□□□□ -0.12
LIMS3-203ENST00000480744 LRFN1Q9P244 771 aa14.3□□□□□ -0.12
LIMS3-203ENST00000480744 CTNNAL1Q9UBT7 734 aa14.3□□□□□ -0.12
LIMS3-203ENST00000480744 NPIPA1Q9UND3 350 aa14.3□□□□□ -0.12
LIMS3-203ENST00000480744 PCDHGB6Q9Y5F9 930 aa14.3□□□□□ -0.12
LIMS3-203ENST00000480744 LRBAP50851 2863 aa14.3□□□□□ -0.12
LIMS3-203ENST00000480744 NCF1BA6NI72 391 aaPredicted RBP14.29□□□□□ -0.12
LIMS3-203ENST00000480744 NCF1CA8MVU1 366 aaPredicted RBP14.29□□□□□ -0.12
LIMS3-203ENST00000480744 EFCAB8A8MWE9 144 aa14.29□□□□□ -0.12
LIMS3-203ENST00000480744 C4orf51C9J302 202 aa14.29□□□□□ -0.12
LIMS3-203ENST00000480744 WDR47O94967 919 aa14.29□□□□□ -0.12
LIMS3-203ENST00000480744 SP1P08047 785 aa14.29□□□□□ -0.12
LIMS3-203ENST00000480744 ESRRAP11474 423 aaPredicted RBP14.29□□□□□ -0.12
LIMS3-203ENST00000480744 NCF1P14598 390 aaPredicted RBP14.29□□□□□ -0.12
LIMS3-203ENST00000480744 GRNP28799 593 aaKnown RBP14.29□□□□□ -0.12
LIMS3-203ENST00000480744 TPP2P29144 1249 aaPredicted RBP14.29□□□□□ -0.12
LIMS3-203ENST00000480744 SLC12A2P55011 1212 aa14.29□□□□□ -0.12
LIMS3-203ENST00000480744 HYAL2Q12891 473 aa14.29□□□□□ -0.12
LIMS3-203ENST00000480744 ART3Q13508 389 aa14.29□□□□□ -0.12
LIMS3-203ENST00000480744 FRG1Q14331 258 aaKnown RBP14.29□□□□□ -0.12
LIMS3-203ENST00000480744 TSNQ15631 228 aaKnown RBP14.29□□□□□ -0.12
LIMS3-203ENST00000480744 C3AR1Q16581 482 aa14.29□□□□□ -0.12
LIMS3-203ENST00000480744 MAPKAPK3Q16644 382 aa14.29□□□□□ -0.12
LIMS3-203ENST00000480744 C18orf21Q32NC0 220 aaPredicted RBP14.29□□□□□ -0.12
LIMS3-203ENST00000480744 ZNF468Q5VIY5 522 aaPredicted RBP14.29□□□□□ -0.12
LIMS3-203ENST00000480744 SLC25A25Q6KCM7 469 aa14.29□□□□□ -0.12
LIMS3-203ENST00000480744 MTFR2Q6P444 385 aa14.29□□□□□ -0.12
LIMS3-203ENST00000480744 QSOX2Q6ZRP7 698 aa14.29□□□□□ -0.12
LIMS3-203ENST00000480744 PNPLA5Q7Z6Z6 429 aaPredicted RBP14.29□□□□□ -0.12
LIMS3-203ENST00000480744 LGI4Q8N135 537 aa14.29□□□□□ -0.12
LIMS3-203ENST00000480744 ARMC2Q8NEN0 867 aa14.29□□□□□ -0.12
LIMS3-203ENST00000480744 ELP5Q8TE02 316 aa14.29□□□□□ -0.12
LIMS3-203ENST00000480744 ANKRD49Q8WVL7 239 aa14.29□□□□□ -0.12
LIMS3-203ENST00000480744 VPS39Q96JC1 886 aa14.29□□□□□ -0.12
LIMS3-203ENST00000480744 GPR137Q96N19 417 aa14.29□□□□□ -0.12
LIMS3-203ENST00000480744 GPAMQ9HCL2 828 aa14.29□□□□□ -0.12
LIMS3-203ENST00000480744 NECTIN3Q9NQS3 549 aa14.29□□□□□ -0.12
LIMS3-203ENST00000480744 PRDM9Q9NQV7 894 aa14.29□□□□□ -0.12
LIMS3-203ENST00000480744 TINAGQ9UJW2 476 aa14.29□□□□□ -0.12
LIMS3-203ENST00000480744 OARD1Q9Y530 152 aa14.29□□□□□ -0.12
LIMS3-203ENST00000480744 SAR1BQ9Y6B6 198 aa14.29□□□□□ -0.12
LIMS3-203ENST00000480744 A0A0G2JN53 185 aa14.28□□□□□ -0.12
LIMS3-203ENST00000480744 SAGE2PA6NJ88 616 aa14.28□□□□□ -0.12
LIMS3-203ENST00000480744 CCDC188H7C350 402 aa14.28□□□□□ -0.12
LIMS3-203ENST00000480744 H2AFYO75367 372 aaKnown RBP14.28□□□□□ -0.12
LIMS3-203ENST00000480744 SLC25A12O75746 678 aa14.28□□□□□ -0.12
LIMS3-203ENST00000480744 PIAS1O75925 651 aa14.28□□□□□ -0.12
LIMS3-203ENST00000480744 NEURL1O76050 574 aa14.28□□□□□ -0.12
LIMS3-203ENST00000480744 SERPINA6P08185 405 aa14.28□□□□□ -0.12
LIMS3-203ENST00000480744 PRF1P14222 555 aa14.28□□□□□ -0.12
LIMS3-203ENST00000480744 TNFRSF8P28908 595 aa14.28□□□□□ -0.12
LIMS3-203ENST00000480744 GDF5P43026 501 aa14.28□□□□□ -0.12
LIMS3-203ENST00000480744 PAFAH1B1P43034 410 aa14.28□□□□□ -0.12
LIMS3-203ENST00000480744 HNMTP50135 292 aa14.28□□□□□ -0.12
LIMS3-203ENST00000480744 BTN3A2P78410 334 aa14.28□□□□□ -0.12
LIMS3-203ENST00000480744 CDKL1Q00532 357 aa14.28□□□□□ -0.12
LIMS3-203ENST00000480744 NCOA6Q14686 2063 aaPredicted RBP14.28□□□□□ -0.12
LIMS3-203ENST00000480744 ADAMTSL2Q86TH1 951 aa14.28□□□□□ -0.12
LIMS3-203ENST00000480744 CEP97Q8IW35 865 aa14.28□□□□□ -0.12
LIMS3-203ENST00000480744 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP14.28□□□□□ -0.12
LIMS3-203ENST00000480744 ZBED8Q8IZ13 594 aa14.28□□□□□ -0.12
LIMS3-203ENST00000480744 CA13Q8N1Q1 262 aa14.28□□□□□ -0.12
LIMS3-203ENST00000480744 ZNF808Q8N4W9 903 aaPredicted RBP14.28□□□□□ -0.12
LIMS3-203ENST00000480744 CREB3L4Q8TEY5 395 aa14.28□□□□□ -0.12
LIMS3-203ENST00000480744 ANKRD7Q92527 254 aa14.28□□□□□ -0.12
LIMS3-203ENST00000480744 FAR2Q96K12 515 aa14.28□□□□□ -0.12
LIMS3-203ENST00000480744 FRMD6Q96NE9 622 aa14.28□□□□□ -0.12
LIMS3-203ENST00000480744 KRT12Q99456 494 aa14.28□□□□□ -0.12
LIMS3-203ENST00000480744 RUBCNLQ9H714 662 aa14.28□□□□□ -0.12
LIMS3-203ENST00000480744 CLK4Q9HAZ1 481 aaKnown RBP14.28□□□□□ -0.12
LIMS3-203ENST00000480744 NSMCE4AQ9NXX6 385 aa14.28□□□□□ -0.12
LIMS3-203ENST00000480744 SNX24Q9Y343 169 aa14.28□□□□□ -0.12
LIMS3-203ENST00000480744 CACNA1CQ13936 2221 aa14.27□□□□□ -0.12
LIMS3-203ENST00000480744 TCRBV16S1A1N1A0A5B0 115 aa14.27□□□□□ -0.13
LIMS3-203ENST00000480744 ASPDHA6ND91 283 aa14.27□□□□□ -0.13
LIMS3-203ENST00000480744 SNRPB2P08579 225 aaKnown RBP14.27□□□□□ -0.13
LIMS3-203ENST00000480744 SMIM10L1P0DMW3 83 aa14.27□□□□□ -0.13
LIMS3-203ENST00000480744 C1GALT1C1LP0DN25 315 aa14.27□□□□□ -0.13
LIMS3-203ENST00000480744 GNAZP19086 355 aa14.27□□□□□ -0.13
LIMS3-203ENST00000480744 RPL21P46778 160 aaKnown RBP14.27□□□□□ -0.13
LIMS3-203ENST00000480744 CYB561P49447 251 aa14.27□□□□□ -0.13
LIMS3-203ENST00000480744 STXBP1P61764 594 aaKnown RBP14.27□□□□□ -0.13
LIMS3-203ENST00000480744 MRPS25P82663 173 aaKnown RBP14.27□□□□□ -0.13
LIMS3-203ENST00000480744 SLBPQ14493 270 aaKnown RBP eCLIP14.27□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 75 ms